Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2918:2859
Extra
PDB:
ATOM 1 O3' U A 917 -66.887 -2.476 118.631 1.00100.59 O
ATOM 2 P G A 918 -66.161 -1.166 118.051 1.00 88.36 P
ATOM 3 OP1 G A 918 -67.129 -0.048 118.143 1.00 88.30 O
ATOM 4 OP2 G A 918 -65.607 -1.530 116.705 1.00 87.32 O
ATOM 5 O5' G A 918 -64.960 -0.944 119.092 1.00 88.43 O
ATOM 6 C5' G A 918 -65.194 -0.757 120.492 1.00 89.51 C
ATOM 7 C4' G A 918 -63.911 -0.404 121.228 1.00 89.30 C
ATOM 8 O4' G A 918 -62.915 -1.433 120.994 1.00 89.25 O
ATOM 9 C3' G A 918 -63.225 0.889 120.793 1.00 87.96 C
ATOM 10 O3' G A 918 -63.750 2.046 121.431 1.00 88.09 O
ATOM 11 C2' G A 918 -61.742 0.642 121.090 1.00 87.68 C
ATOM 12 O2' G A 918 -61.431 0.954 122.438 1.00 88.46 O
ATOM 13 C1' G A 918 -61.621 -0.866 120.905 1.00 88.31 C
ATOM 14 N9 G A 918 -61.025 -1.235 119.602 1.00 87.26 N
ATOM 15 C8 G A 918 -61.674 -1.857 118.558 1.00 87.09 C
ATOM 16 N7 G A 918 -60.905 -2.099 117.530 1.00 86.16 N
ATOM 17 C5 G A 918 -59.671 -1.629 117.927 1.00 85.69 C
ATOM 18 C6 G A 918 -58.460 -1.632 117.225 1.00 84.72 C
ATOM 19 O6 G A 918 -58.237 -2.065 116.107 1.00 84.09 O
ATOM 20 N1 G A 918 -57.435 -1.064 117.948 1.00 84.55 N
ATOM 21 C2 G A 918 -57.559 -0.552 119.207 1.00 85.25 C
ATOM 22 N2 G A 918 -56.422 -0.042 119.724 1.00 84.96 N
ATOM 23 N3 G A 918 -58.701 -0.553 119.890 1.00 86.19 N
ATOM 24 C4 G A 918 -59.713 -1.098 119.192 1.00 86.34 C
ATOM 25 P C A 919 -63.826 3.429 120.621 1.00 84.77 P
ATOM 26 OP1 C A 919 -64.640 4.376 121.431 1.00 85.33 O
ATOM 27 OP2 C A 919 -64.277 3.089 119.236 1.00 84.09 O
ATOM 28 O5' C A 919 -62.303 3.902 120.610 1.00 83.85 O
TER
ATOM 1 O3' G B 858 -54.195 -0.151 123.072 1.00 90.15 O
ATOM 2 P G B 859 -55.091 1.183 123.240 1.00 80.18 P
ATOM 3 OP1 G B 859 -55.091 1.523 124.695 1.00 81.23 O
ATOM 4 OP2 G B 859 -56.394 0.947 122.558 1.00 80.18 O
ATOM 5 O5' G B 859 -54.258 2.269 122.423 1.00 78.67 O
ATOM 6 C5' G B 859 -54.421 2.406 121.017 1.00 77.52 C
ATOM 7 C4' G B 859 -53.874 3.720 120.531 1.00 76.30 C
ATOM 8 O4' G B 859 -54.640 4.808 121.111 1.00 76.46 O
ATOM 9 C3' G B 859 -52.439 4.014 120.931 1.00 76.04 C
ATOM 10 O3' G B 859 -51.491 3.409 120.071 1.00 75.41 O
ATOM 11 C2' G B 859 -52.397 5.528 120.921 1.00 75.28 C
ATOM 12 O2' G B 859 -52.306 6.021 119.595 1.00 74.00 O
ATOM 13 C1' G B 859 -53.782 5.858 121.478 1.00 75.98 C
ATOM 14 N9 G B 859 -53.746 5.907 122.934 1.00 77.12 N
ATOM 15 C8 G B 859 -54.325 5.029 123.795 1.00 78.43 C
ATOM 16 N7 G B 859 -54.056 5.311 125.051 1.00 79.28 N
ATOM 17 C5 G B 859 -53.229 6.423 125.013 1.00 78.47 C
ATOM 18 C6 G B 859 -52.610 7.167 126.047 1.00 78.84 C
ATOM 19 O6 G B 859 -52.668 6.995 127.252 1.00 80.01 O
ATOM 20 N1 G B 859 -51.849 8.212 125.552 1.00 77.73 N
ATOM 21 C2 G B 859 -51.716 8.486 124.214 1.00 76.42 C
ATOM 22 N2 G B 859 -50.953 9.512 123.880 1.00 75.50 N
ATOM 23 N3 G B 859 -52.276 7.814 123.232 1.00 76.06 N
ATOM 24 C4 G B 859 -53.023 6.792 123.698 1.00 77.12 C
ATOM 25 P G B 860 -50.094 2.871 120.659 1.00 77.95 P
ATOM 26 OP1 G B 860 -49.396 2.177 119.562 1.00 77.29 O
ATOM 27 OP2 G B 860 -50.383 2.121 121.901 1.00 79.41 O
ATOM 28 O5' G B 860 -49.333 4.218 121.007 1.00 77.35 O
TER
ATOM 2 P G A 918 -66.161 -1.166 118.051 1.00 88.36 P
ATOM 3 OP1 G A 918 -67.129 -0.048 118.143 1.00 88.30 O
ATOM 4 OP2 G A 918 -65.607 -1.530 116.705 1.00 87.32 O
ATOM 5 O5' G A 918 -64.960 -0.944 119.092 1.00 88.43 O
ATOM 6 C5' G A 918 -65.194 -0.757 120.492 1.00 89.51 C
ATOM 7 C4' G A 918 -63.911 -0.404 121.228 1.00 89.30 C
ATOM 8 O4' G A 918 -62.915 -1.433 120.994 1.00 89.25 O
ATOM 9 C3' G A 918 -63.225 0.889 120.793 1.00 87.96 C
ATOM 10 O3' G A 918 -63.750 2.046 121.431 1.00 88.09 O
ATOM 11 C2' G A 918 -61.742 0.642 121.090 1.00 87.68 C
ATOM 12 O2' G A 918 -61.431 0.954 122.438 1.00 88.46 O
ATOM 13 C1' G A 918 -61.621 -0.866 120.905 1.00 88.31 C
ATOM 14 N9 G A 918 -61.025 -1.235 119.602 1.00 87.26 N
ATOM 15 C8 G A 918 -61.674 -1.857 118.558 1.00 87.09 C
ATOM 16 N7 G A 918 -60.905 -2.099 117.530 1.00 86.16 N
ATOM 17 C5 G A 918 -59.671 -1.629 117.927 1.00 85.69 C
ATOM 18 C6 G A 918 -58.460 -1.632 117.225 1.00 84.72 C
ATOM 19 O6 G A 918 -58.237 -2.065 116.107 1.00 84.09 O
ATOM 20 N1 G A 918 -57.435 -1.064 117.948 1.00 84.55 N
ATOM 21 C2 G A 918 -57.559 -0.552 119.207 1.00 85.25 C
ATOM 22 N2 G A 918 -56.422 -0.042 119.724 1.00 84.96 N
ATOM 23 N3 G A 918 -58.701 -0.553 119.890 1.00 86.19 N
ATOM 24 C4 G A 918 -59.713 -1.098 119.192 1.00 86.34 C
ATOM 25 P C A 919 -63.826 3.429 120.621 1.00 84.77 P
ATOM 26 OP1 C A 919 -64.640 4.376 121.431 1.00 85.33 O
ATOM 27 OP2 C A 919 -64.277 3.089 119.236 1.00 84.09 O
ATOM 28 O5' C A 919 -62.303 3.902 120.610 1.00 83.85 O
TER
ATOM 1 O3' G B 858 -54.195 -0.151 123.072 1.00 90.15 O
ATOM 2 P G B 859 -55.091 1.183 123.240 1.00 80.18 P
ATOM 3 OP1 G B 859 -55.091 1.523 124.695 1.00 81.23 O
ATOM 4 OP2 G B 859 -56.394 0.947 122.558 1.00 80.18 O
ATOM 5 O5' G B 859 -54.258 2.269 122.423 1.00 78.67 O
ATOM 6 C5' G B 859 -54.421 2.406 121.017 1.00 77.52 C
ATOM 7 C4' G B 859 -53.874 3.720 120.531 1.00 76.30 C
ATOM 8 O4' G B 859 -54.640 4.808 121.111 1.00 76.46 O
ATOM 9 C3' G B 859 -52.439 4.014 120.931 1.00 76.04 C
ATOM 10 O3' G B 859 -51.491 3.409 120.071 1.00 75.41 O
ATOM 11 C2' G B 859 -52.397 5.528 120.921 1.00 75.28 C
ATOM 12 O2' G B 859 -52.306 6.021 119.595 1.00 74.00 O
ATOM 13 C1' G B 859 -53.782 5.858 121.478 1.00 75.98 C
ATOM 14 N9 G B 859 -53.746 5.907 122.934 1.00 77.12 N
ATOM 15 C8 G B 859 -54.325 5.029 123.795 1.00 78.43 C
ATOM 16 N7 G B 859 -54.056 5.311 125.051 1.00 79.28 N
ATOM 17 C5 G B 859 -53.229 6.423 125.013 1.00 78.47 C
ATOM 18 C6 G B 859 -52.610 7.167 126.047 1.00 78.84 C
ATOM 19 O6 G B 859 -52.668 6.995 127.252 1.00 80.01 O
ATOM 20 N1 G B 859 -51.849 8.212 125.552 1.00 77.73 N
ATOM 21 C2 G B 859 -51.716 8.486 124.214 1.00 76.42 C
ATOM 22 N2 G B 859 -50.953 9.512 123.880 1.00 75.50 N
ATOM 23 N3 G B 859 -52.276 7.814 123.232 1.00 76.06 N
ATOM 24 C4 G B 859 -53.023 6.792 123.698 1.00 77.12 C
ATOM 25 P G B 860 -50.094 2.871 120.659 1.00 77.95 P
ATOM 26 OP1 G B 860 -49.396 2.177 119.562 1.00 77.29 O
ATOM 27 OP2 G B 860 -50.383 2.121 121.901 1.00 79.41 O
ATOM 28 O5' G B 860 -49.333 4.218 121.007 1.00 77.35 O
TER
Atoms:
OP1: (-67.129,-0.048,118.143)
OP2: (-65.607,-1.530,116.705)
C3': (-63.225,0.889,120.793)
C1': (-61.621,-0.866,120.905)
C5': (-65.194,-0.757,120.492)
O6: (-58.237,-2.065,116.107)
O4': (-62.915,-1.433,120.994)
C8: (-61.674,-1.857,118.558)
C2: (-57.559,-0.552,119.207)
C6: (-58.460,-1.632,117.225)
C5: (-59.671,-1.629,117.927)
C4: (-59.713,-1.098,119.192)
P: (-66.161,-1.166,118.051)
C4': (-63.911,-0.404,121.228)
C2': (-61.742,0.642,121.090)
O2': (-61.431,0.954,122.438)
N1: (-57.435,-1.064,117.948)
N2: (-56.422,-0.042,119.724)
N3: (-58.701,-0.553,119.890)
N7: (-60.905,-2.099,117.530)
N9: (-61.025,-1.235,119.602)
O5': (-64.960,-0.944,119.092)
O3': (-63.750,2.046,121.431)
OP2: (-65.607,-1.530,116.705)
C3': (-63.225,0.889,120.793)
C1': (-61.621,-0.866,120.905)
C5': (-65.194,-0.757,120.492)
O6: (-58.237,-2.065,116.107)
O4': (-62.915,-1.433,120.994)
C8: (-61.674,-1.857,118.558)
C2: (-57.559,-0.552,119.207)
C6: (-58.460,-1.632,117.225)
C5: (-59.671,-1.629,117.927)
C4: (-59.713,-1.098,119.192)
P: (-66.161,-1.166,118.051)
C4': (-63.911,-0.404,121.228)
C2': (-61.742,0.642,121.090)
O2': (-61.431,0.954,122.438)
N1: (-57.435,-1.064,117.948)
N2: (-56.422,-0.042,119.724)
N3: (-58.701,-0.553,119.890)
N7: (-60.905,-2.099,117.530)
N9: (-61.025,-1.235,119.602)
O5': (-64.960,-0.944,119.092)
O3': (-63.750,2.046,121.431)
OP1: (-55.091,1.523,124.695)
OP2: (-56.394,0.947,122.558)
C3': (-52.439,4.014,120.931)
C1': (-53.782,5.858,121.478)
C5': (-54.421,2.406,121.017)
O6: (-52.668,6.995,127.252)
O4': (-54.640,4.808,121.111)
C8: (-54.325,5.029,123.795)
C2: (-51.716,8.486,124.214)
C6: (-52.610,7.167,126.047)
C5: (-53.229,6.423,125.013)
C4: (-53.023,6.792,123.698)
P: (-55.091,1.183,123.240)
C4': (-53.874,3.720,120.531)
C2': (-52.397,5.528,120.921)
O2': (-52.306,6.021,119.595)
N1: (-51.849,8.212,125.552)
N2: (-50.953,9.512,123.880)
N3: (-52.276,7.814,123.232)
N7: (-54.056,5.311,125.051)
N9: (-53.746,5.907,122.934)
O5': (-54.258,2.269,122.423)
O3': (-51.491,3.409,120.071)
OP2: (-56.394,0.947,122.558)
C3': (-52.439,4.014,120.931)
C1': (-53.782,5.858,121.478)
C5': (-54.421,2.406,121.017)
O6: (-52.668,6.995,127.252)
O4': (-54.640,4.808,121.111)
C8: (-54.325,5.029,123.795)
C2: (-51.716,8.486,124.214)
C6: (-52.610,7.167,126.047)
C5: (-53.229,6.423,125.013)
C4: (-53.023,6.792,123.698)
P: (-55.091,1.183,123.240)
C4': (-53.874,3.720,120.531)
C2': (-52.397,5.528,120.921)
O2': (-52.306,6.021,119.595)
N1: (-51.849,8.212,125.552)
N2: (-50.953,9.512,123.880)
N3: (-52.276,7.814,123.232)
N7: (-54.056,5.311,125.051)
N9: (-53.746,5.907,122.934)
O5': (-54.258,2.269,122.423)
O3': (-51.491,3.409,120.071)
Image (generated by PyMOL):