Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0500:0501
Extra
PDB:
ATOM 1 O3' A A 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 2 P G A 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 3 OP1 G A 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 4 OP2 G A 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 5 O5' G A 500 24.138 154.750 62.215 1.00 45.29 O
ATOM 6 C5' G A 500 25.266 154.545 61.357 1.00 48.01 C
ATOM 7 C4' G A 500 26.085 155.808 61.271 1.00 49.60 C
ATOM 8 O4' G A 500 25.314 156.829 60.581 1.00 49.18 O
ATOM 9 C3' G A 500 26.486 156.414 62.614 1.00 50.51 C
ATOM 10 O3' G A 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 11 C2' G A 500 25.381 157.437 62.849 1.00 51.07 C
ATOM 12 O2' G A 500 25.751 158.487 63.721 1.00 50.39 O
ATOM 13 C1' G A 500 25.163 157.952 61.426 1.00 51.09 C
ATOM 14 N9 G A 500 23.861 158.564 61.169 1.00 52.07 N
ATOM 15 C8 G A 500 22.776 158.617 62.012 1.00 52.01 C
ATOM 16 N7 G A 500 21.769 159.277 61.509 1.00 52.95 N
ATOM 17 C5 G A 500 22.211 159.677 60.255 1.00 52.37 C
ATOM 18 C6 G A 500 21.557 160.431 59.251 1.00 52.51 C
ATOM 19 O6 G A 500 20.430 160.931 59.282 1.00 50.27 O
ATOM 20 N1 G A 500 22.359 160.586 58.124 1.00 52.84 N
ATOM 21 C2 G A 500 23.631 160.086 57.986 1.00 52.55 C
ATOM 22 N2 G A 500 24.244 160.318 56.818 1.00 52.76 N
ATOM 23 N3 G A 500 24.257 159.400 58.924 1.00 52.89 N
ATOM 24 C4 G A 500 23.493 159.232 60.023 1.00 52.08 C
ATOM 25 P A A 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 26 OP1 A A 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 27 OP2 A A 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 28 O5' A A 501 30.096 156.306 62.806 1.00 52.29 O
TER
ATOM 1 O3' G B 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 2 P A B 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 3 OP1 A B 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 4 OP2 A B 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 5 O5' A B 501 30.096 156.306 62.806 1.00 52.29 O
ATOM 6 C5' A B 501 29.992 155.003 62.226 1.00 56.06 C
ATOM 7 C4' A B 501 30.684 154.974 60.888 1.00 60.50 C
ATOM 8 O4' A B 501 29.874 155.674 59.908 1.00 61.05 O
ATOM 9 C3' A B 501 32.060 155.619 60.855 1.00 63.76 C
ATOM 10 O3' A B 501 32.945 154.881 60.041 1.00 69.30 O
ATOM 11 C2' A B 501 31.783 156.994 60.267 1.00 64.12 C
ATOM 12 O2' A B 501 32.887 157.531 59.569 1.00 66.61 O
ATOM 13 C1' A B 501 30.623 156.713 59.316 1.00 62.41 C
ATOM 14 N9 A B 501 29.761 157.892 59.215 1.00 62.64 N
ATOM 15 C8 A B 501 28.915 158.394 60.180 1.00 62.56 C
ATOM 16 N7 A B 501 28.319 159.510 59.836 1.00 62.43 N
ATOM 17 C5 A B 501 28.788 159.754 58.554 1.00 62.31 C
ATOM 18 C6 A B 501 28.546 160.796 57.647 1.00 62.48 C
ATOM 19 N6 A B 501 27.748 161.832 57.915 1.00 62.71 N
ATOM 20 N1 A B 501 29.165 160.742 56.445 1.00 61.39 N
ATOM 21 C2 A B 501 29.978 159.704 56.188 1.00 61.32 C
ATOM 22 N3 A B 501 30.293 158.667 56.965 1.00 61.27 N
ATOM 23 C4 A B 501 29.660 158.753 58.148 1.00 62.30 C
ATOM 24 P G B 502 34.359 154.414 60.647 1.00 75.44 P
ATOM 25 OP1 G B 502 34.215 154.253 62.125 1.00 72.78 O
ATOM 26 OP2 G B 502 35.408 155.324 60.106 1.00 75.61 O
ATOM 27 O5' G B 502 34.592 152.968 60.018 1.00 76.85 O
TER
ATOM 2 P G A 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 3 OP1 G A 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 4 OP2 G A 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 5 O5' G A 500 24.138 154.750 62.215 1.00 45.29 O
ATOM 6 C5' G A 500 25.266 154.545 61.357 1.00 48.01 C
ATOM 7 C4' G A 500 26.085 155.808 61.271 1.00 49.60 C
ATOM 8 O4' G A 500 25.314 156.829 60.581 1.00 49.18 O
ATOM 9 C3' G A 500 26.486 156.414 62.614 1.00 50.51 C
ATOM 10 O3' G A 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 11 C2' G A 500 25.381 157.437 62.849 1.00 51.07 C
ATOM 12 O2' G A 500 25.751 158.487 63.721 1.00 50.39 O
ATOM 13 C1' G A 500 25.163 157.952 61.426 1.00 51.09 C
ATOM 14 N9 G A 500 23.861 158.564 61.169 1.00 52.07 N
ATOM 15 C8 G A 500 22.776 158.617 62.012 1.00 52.01 C
ATOM 16 N7 G A 500 21.769 159.277 61.509 1.00 52.95 N
ATOM 17 C5 G A 500 22.211 159.677 60.255 1.00 52.37 C
ATOM 18 C6 G A 500 21.557 160.431 59.251 1.00 52.51 C
ATOM 19 O6 G A 500 20.430 160.931 59.282 1.00 50.27 O
ATOM 20 N1 G A 500 22.359 160.586 58.124 1.00 52.84 N
ATOM 21 C2 G A 500 23.631 160.086 57.986 1.00 52.55 C
ATOM 22 N2 G A 500 24.244 160.318 56.818 1.00 52.76 N
ATOM 23 N3 G A 500 24.257 159.400 58.924 1.00 52.89 N
ATOM 24 C4 G A 500 23.493 159.232 60.023 1.00 52.08 C
ATOM 25 P A A 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 26 OP1 A A 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 27 OP2 A A 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 28 O5' A A 501 30.096 156.306 62.806 1.00 52.29 O
TER
ATOM 1 O3' G B 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 2 P A B 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 3 OP1 A B 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 4 OP2 A B 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 5 O5' A B 501 30.096 156.306 62.806 1.00 52.29 O
ATOM 6 C5' A B 501 29.992 155.003 62.226 1.00 56.06 C
ATOM 7 C4' A B 501 30.684 154.974 60.888 1.00 60.50 C
ATOM 8 O4' A B 501 29.874 155.674 59.908 1.00 61.05 O
ATOM 9 C3' A B 501 32.060 155.619 60.855 1.00 63.76 C
ATOM 10 O3' A B 501 32.945 154.881 60.041 1.00 69.30 O
ATOM 11 C2' A B 501 31.783 156.994 60.267 1.00 64.12 C
ATOM 12 O2' A B 501 32.887 157.531 59.569 1.00 66.61 O
ATOM 13 C1' A B 501 30.623 156.713 59.316 1.00 62.41 C
ATOM 14 N9 A B 501 29.761 157.892 59.215 1.00 62.64 N
ATOM 15 C8 A B 501 28.915 158.394 60.180 1.00 62.56 C
ATOM 16 N7 A B 501 28.319 159.510 59.836 1.00 62.43 N
ATOM 17 C5 A B 501 28.788 159.754 58.554 1.00 62.31 C
ATOM 18 C6 A B 501 28.546 160.796 57.647 1.00 62.48 C
ATOM 19 N6 A B 501 27.748 161.832 57.915 1.00 62.71 N
ATOM 20 N1 A B 501 29.165 160.742 56.445 1.00 61.39 N
ATOM 21 C2 A B 501 29.978 159.704 56.188 1.00 61.32 C
ATOM 22 N3 A B 501 30.293 158.667 56.965 1.00 61.27 N
ATOM 23 C4 A B 501 29.660 158.753 58.148 1.00 62.30 C
ATOM 24 P G B 502 34.359 154.414 60.647 1.00 75.44 P
ATOM 25 OP1 G B 502 34.215 154.253 62.125 1.00 72.78 O
ATOM 26 OP2 G B 502 35.408 155.324 60.106 1.00 75.61 O
ATOM 27 O5' G B 502 34.592 152.968 60.018 1.00 76.85 O
TER
Atoms:
OP1: (24.812,153.395,64.189)
OP2: (22.354,153.989,63.783)
C3': (26.486,156.414,62.614)
C1': (25.163,157.952,61.426)
C5': (25.266,154.545,61.357)
O6: (20.430,160.931,59.282)
O4': (25.314,156.829,60.581)
C8: (22.776,158.617,62.012)
C2: (23.631,160.086,57.986)
C6: (21.557,160.431,59.251)
C5: (22.211,159.677,60.255)
C4: (23.493,159.232,60.023)
P: (23.694,153.628,63.248)
C4': (26.085,155.808,61.271)
C2': (25.381,157.437,62.849)
O2': (25.751,158.487,63.721)
N1: (22.359,160.586,58.124)
N2: (24.244,160.318,56.818)
N3: (24.257,159.400,58.924)
N7: (21.769,159.277,61.509)
N9: (23.861,158.564,61.169)
O5': (24.138,154.750,62.215)
O3': (27.734,157.084,62.464)
OP2: (22.354,153.989,63.783)
C3': (26.486,156.414,62.614)
C1': (25.163,157.952,61.426)
C5': (25.266,154.545,61.357)
O6: (20.430,160.931,59.282)
O4': (25.314,156.829,60.581)
C8: (22.776,158.617,62.012)
C2: (23.631,160.086,57.986)
C6: (21.557,160.431,59.251)
C5: (22.211,159.677,60.255)
C4: (23.493,159.232,60.023)
P: (23.694,153.628,63.248)
C4': (26.085,155.808,61.271)
C2': (25.381,157.437,62.849)
O2': (25.751,158.487,63.721)
N1: (22.359,160.586,58.124)
N2: (24.244,160.318,56.818)
N3: (24.257,159.400,58.924)
N7: (21.769,159.277,61.509)
N9: (23.861,158.564,61.169)
O5': (24.138,154.750,62.215)
O3': (27.734,157.084,62.464)
OP1: (28.434,155.961,64.624)
OP2: (29.242,158.319,63.997)
C3': (32.060,155.619,60.855)
C1': (30.623,156.713,59.316)
C5': (29.992,155.003,62.226)
O4': (29.874,155.674,59.908)
C8: (28.915,158.394,60.180)
O2': (32.887,157.531,59.569)
C6: (28.546,160.796,57.647)
C5: (28.788,159.754,58.554)
C4: (29.660,158.753,58.148)
P: (28.871,156.942,63.593)
C4': (30.684,154.974,60.888)
C2': (31.783,156.994,60.267)
C2: (29.978,159.704,56.188)
N1: (29.165,160.742,56.445)
N3: (30.293,158.667,56.965)
N6: (27.748,161.832,57.915)
N7: (28.319,159.510,59.836)
N9: (29.761,157.892,59.215)
O5': (30.096,156.306,62.806)
O3': (32.945,154.881,60.041)
OP2: (29.242,158.319,63.997)
C3': (32.060,155.619,60.855)
C1': (30.623,156.713,59.316)
C5': (29.992,155.003,62.226)
O4': (29.874,155.674,59.908)
C8: (28.915,158.394,60.180)
O2': (32.887,157.531,59.569)
C6: (28.546,160.796,57.647)
C5: (28.788,159.754,58.554)
C4: (29.660,158.753,58.148)
P: (28.871,156.942,63.593)
C4': (30.684,154.974,60.888)
C2': (31.783,156.994,60.267)
C2: (29.978,159.704,56.188)
N1: (29.165,160.742,56.445)
N3: (30.293,158.667,56.965)
N6: (27.748,161.832,57.915)
N7: (28.319,159.510,59.836)
N9: (29.761,157.892,59.215)
O5': (30.096,156.306,62.806)
O3': (32.945,154.881,60.041)
Image (generated by PyMOL):