Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0500:0501
Extra
PDB:
ATOM 1 O3' A A 499 23.708 152.175 62.284 1.00 50.82 O
ATOM 2 P G A 500 23.853 153.475 63.213 1.00 49.74 P
ATOM 3 OP1 G A 500 24.984 153.237 64.135 1.00 49.96 O
ATOM 4 OP2 G A 500 22.518 153.821 63.766 1.00 48.01 O
ATOM 5 O5' G A 500 24.292 154.610 62.195 1.00 47.53 O
ATOM 6 C5' G A 500 25.418 154.418 61.337 1.00 48.32 C
ATOM 7 C4' G A 500 26.237 155.681 61.272 1.00 49.46 C
ATOM 8 O4' G A 500 25.489 156.710 60.575 1.00 50.03 O
ATOM 9 C3' G A 500 26.613 156.276 62.624 1.00 50.42 C
ATOM 10 O3' G A 500 27.854 156.942 62.483 1.00 51.73 O
ATOM 11 C2' G A 500 25.515 157.304 62.852 1.00 50.80 C
ATOM 12 O2' G A 500 25.913 158.352 63.716 1.00 50.38 O
ATOM 13 C1' G A 500 25.306 157.823 61.430 1.00 51.78 C
ATOM 14 N9 G A 500 23.992 158.404 61.155 1.00 53.25 N
ATOM 15 C8 G A 500 22.886 158.422 61.977 1.00 53.62 C
ATOM 16 N7 G A 500 21.868 159.045 61.449 1.00 54.34 N
ATOM 17 C5 G A 500 22.327 159.460 60.206 1.00 54.16 C
ATOM 18 C6 G A 500 21.672 160.183 59.186 1.00 54.20 C
ATOM 19 O6 G A 500 20.530 160.640 59.187 1.00 54.93 O
ATOM 20 N1 G A 500 22.494 160.366 58.077 1.00 54.16 N
ATOM 21 C2 G A 500 23.789 159.921 57.974 1.00 53.37 C
ATOM 22 N2 G A 500 24.427 160.188 56.825 1.00 53.02 N
ATOM 23 N3 G A 500 24.415 159.261 58.926 1.00 53.60 N
ATOM 24 C4 G A 500 23.630 159.064 60.006 1.00 53.25 C
ATOM 25 P A A 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 26 OP1 A A 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 27 OP2 A A 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 28 O5' A A 501 30.192 156.095 62.713 1.00 51.22 O
TER
ATOM 1 O3' G B 500 27.854 156.942 62.483 1.00 51.73 O
ATOM 2 P A B 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 3 OP1 A B 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 4 OP2 A B 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 5 O5' A B 501 30.192 156.095 62.713 1.00 51.22 O
ATOM 6 C5' A B 501 30.046 154.819 62.089 1.00 55.73 C
ATOM 7 C4' A B 501 30.812 154.792 60.796 1.00 60.40 C
ATOM 8 O4' A B 501 30.062 155.503 59.779 1.00 61.19 O
ATOM 9 C3' A B 501 32.188 155.434 60.856 1.00 63.08 C
ATOM 10 O3' A B 501 33.127 154.709 60.094 1.00 67.43 O
ATOM 11 C2' A B 501 31.953 156.822 60.276 1.00 64.13 C
ATOM 12 O2' A B 501 33.096 157.340 59.626 1.00 66.31 O
ATOM 13 C1' A B 501 30.824 156.581 59.275 1.00 62.99 C
ATOM 14 N9 A B 501 29.945 157.751 59.221 1.00 64.45 N
ATOM 15 C8 A B 501 29.095 158.181 60.215 1.00 64.88 C
ATOM 16 N7 A B 501 28.454 159.287 59.927 1.00 64.48 N
ATOM 17 C5 A B 501 28.902 159.607 58.656 1.00 64.80 C
ATOM 18 C6 A B 501 28.610 160.678 57.803 1.00 65.07 C
ATOM 19 N6 A B 501 27.772 161.664 58.129 1.00 64.77 N
ATOM 20 N1 A B 501 29.220 160.707 56.594 1.00 65.04 N
ATOM 21 C2 A B 501 30.073 159.717 56.284 1.00 64.25 C
ATOM 22 N3 A B 501 30.437 158.660 57.008 1.00 64.23 N
ATOM 23 C4 A B 501 29.811 158.662 58.199 1.00 65.00 C
ATOM 24 P G B 502 34.516 154.275 60.774 1.00 72.27 P
ATOM 25 OP1 G B 502 34.321 154.177 62.250 1.00 69.99 O
ATOM 26 OP2 G B 502 35.579 155.164 60.229 1.00 72.56 O
ATOM 27 O5' G B 502 34.778 152.805 60.219 1.00 74.13 O
TER
ATOM 2 P G A 500 23.853 153.475 63.213 1.00 49.74 P
ATOM 3 OP1 G A 500 24.984 153.237 64.135 1.00 49.96 O
ATOM 4 OP2 G A 500 22.518 153.821 63.766 1.00 48.01 O
ATOM 5 O5' G A 500 24.292 154.610 62.195 1.00 47.53 O
ATOM 6 C5' G A 500 25.418 154.418 61.337 1.00 48.32 C
ATOM 7 C4' G A 500 26.237 155.681 61.272 1.00 49.46 C
ATOM 8 O4' G A 500 25.489 156.710 60.575 1.00 50.03 O
ATOM 9 C3' G A 500 26.613 156.276 62.624 1.00 50.42 C
ATOM 10 O3' G A 500 27.854 156.942 62.483 1.00 51.73 O
ATOM 11 C2' G A 500 25.515 157.304 62.852 1.00 50.80 C
ATOM 12 O2' G A 500 25.913 158.352 63.716 1.00 50.38 O
ATOM 13 C1' G A 500 25.306 157.823 61.430 1.00 51.78 C
ATOM 14 N9 G A 500 23.992 158.404 61.155 1.00 53.25 N
ATOM 15 C8 G A 500 22.886 158.422 61.977 1.00 53.62 C
ATOM 16 N7 G A 500 21.868 159.045 61.449 1.00 54.34 N
ATOM 17 C5 G A 500 22.327 159.460 60.206 1.00 54.16 C
ATOM 18 C6 G A 500 21.672 160.183 59.186 1.00 54.20 C
ATOM 19 O6 G A 500 20.530 160.640 59.187 1.00 54.93 O
ATOM 20 N1 G A 500 22.494 160.366 58.077 1.00 54.16 N
ATOM 21 C2 G A 500 23.789 159.921 57.974 1.00 53.37 C
ATOM 22 N2 G A 500 24.427 160.188 56.825 1.00 53.02 N
ATOM 23 N3 G A 500 24.415 159.261 58.926 1.00 53.60 N
ATOM 24 C4 G A 500 23.630 159.064 60.006 1.00 53.25 C
ATOM 25 P A A 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 26 OP1 A A 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 27 OP2 A A 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 28 O5' A A 501 30.192 156.095 62.713 1.00 51.22 O
TER
ATOM 1 O3' G B 500 27.854 156.942 62.483 1.00 51.73 O
ATOM 2 P A B 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 3 OP1 A B 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 4 OP2 A B 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 5 O5' A B 501 30.192 156.095 62.713 1.00 51.22 O
ATOM 6 C5' A B 501 30.046 154.819 62.089 1.00 55.73 C
ATOM 7 C4' A B 501 30.812 154.792 60.796 1.00 60.40 C
ATOM 8 O4' A B 501 30.062 155.503 59.779 1.00 61.19 O
ATOM 9 C3' A B 501 32.188 155.434 60.856 1.00 63.08 C
ATOM 10 O3' A B 501 33.127 154.709 60.094 1.00 67.43 O
ATOM 11 C2' A B 501 31.953 156.822 60.276 1.00 64.13 C
ATOM 12 O2' A B 501 33.096 157.340 59.626 1.00 66.31 O
ATOM 13 C1' A B 501 30.824 156.581 59.275 1.00 62.99 C
ATOM 14 N9 A B 501 29.945 157.751 59.221 1.00 64.45 N
ATOM 15 C8 A B 501 29.095 158.181 60.215 1.00 64.88 C
ATOM 16 N7 A B 501 28.454 159.287 59.927 1.00 64.48 N
ATOM 17 C5 A B 501 28.902 159.607 58.656 1.00 64.80 C
ATOM 18 C6 A B 501 28.610 160.678 57.803 1.00 65.07 C
ATOM 19 N6 A B 501 27.772 161.664 58.129 1.00 64.77 N
ATOM 20 N1 A B 501 29.220 160.707 56.594 1.00 65.04 N
ATOM 21 C2 A B 501 30.073 159.717 56.284 1.00 64.25 C
ATOM 22 N3 A B 501 30.437 158.660 57.008 1.00 64.23 N
ATOM 23 C4 A B 501 29.811 158.662 58.199 1.00 65.00 C
ATOM 24 P G B 502 34.516 154.275 60.774 1.00 72.27 P
ATOM 25 OP1 G B 502 34.321 154.177 62.250 1.00 69.99 O
ATOM 26 OP2 G B 502 35.579 155.164 60.229 1.00 72.56 O
ATOM 27 O5' G B 502 34.778 152.805 60.219 1.00 74.13 O
TER
Atoms:
OP1: (24.984,153.237,64.135)
OP2: (22.518,153.821,63.766)
C3': (26.613,156.276,62.624)
C1': (25.306,157.823,61.430)
C5': (25.418,154.418,61.337)
O6: (20.530,160.640,59.187)
O4': (25.489,156.710,60.575)
C8: (22.886,158.422,61.977)
C2: (23.789,159.921,57.974)
C6: (21.672,160.183,59.186)
C5: (22.327,159.460,60.206)
C4: (23.630,159.064,60.006)
P: (23.853,153.475,63.213)
C4': (26.237,155.681,61.272)
C2': (25.515,157.304,62.852)
O2': (25.913,158.352,63.716)
N1: (22.494,160.366,58.077)
N2: (24.427,160.188,56.825)
N3: (24.415,159.261,58.926)
N7: (21.868,159.045,61.449)
N9: (23.992,158.404,61.155)
O5': (24.292,154.610,62.195)
O3': (27.854,156.942,62.483)
OP2: (22.518,153.821,63.766)
C3': (26.613,156.276,62.624)
C1': (25.306,157.823,61.430)
C5': (25.418,154.418,61.337)
O6: (20.530,160.640,59.187)
O4': (25.489,156.710,60.575)
C8: (22.886,158.422,61.977)
C2: (23.789,159.921,57.974)
C6: (21.672,160.183,59.186)
C5: (22.327,159.460,60.206)
C4: (23.630,159.064,60.006)
P: (23.853,153.475,63.213)
C4': (26.237,155.681,61.272)
C2': (25.515,157.304,62.852)
O2': (25.913,158.352,63.716)
N1: (22.494,160.366,58.077)
N2: (24.427,160.188,56.825)
N3: (24.415,159.261,58.926)
N7: (21.868,159.045,61.449)
N9: (23.992,158.404,61.155)
O5': (24.292,154.610,62.195)
O3': (27.854,156.942,62.483)
OP1: (28.576,155.716,64.575)
OP2: (29.415,158.083,64.004)
C3': (32.188,155.434,60.856)
C1': (30.824,156.581,59.275)
C5': (30.046,154.819,62.089)
O4': (30.062,155.503,59.779)
C8: (29.095,158.181,60.215)
O2': (33.096,157.340,59.626)
C6: (28.610,160.678,57.803)
C5: (28.902,159.607,58.656)
C4: (29.811,158.662,58.199)
P: (29.010,156.722,63.567)
C4': (30.812,154.792,60.796)
C2': (31.953,156.822,60.276)
C2: (30.073,159.717,56.284)
N1: (29.220,160.707,56.594)
N3: (30.437,158.660,57.008)
N6: (27.772,161.664,58.129)
N7: (28.454,159.287,59.927)
N9: (29.945,157.751,59.221)
O5': (30.192,156.095,62.713)
O3': (33.127,154.709,60.094)
OP2: (29.415,158.083,64.004)
C3': (32.188,155.434,60.856)
C1': (30.824,156.581,59.275)
C5': (30.046,154.819,62.089)
O4': (30.062,155.503,59.779)
C8: (29.095,158.181,60.215)
O2': (33.096,157.340,59.626)
C6: (28.610,160.678,57.803)
C5: (28.902,159.607,58.656)
C4: (29.811,158.662,58.199)
P: (29.010,156.722,63.567)
C4': (30.812,154.792,60.796)
C2': (31.953,156.822,60.276)
C2: (30.073,159.717,56.284)
N1: (29.220,160.707,56.594)
N3: (30.437,158.660,57.008)
N6: (27.772,161.664,58.129)
N7: (28.454,159.287,59.927)
N9: (29.945,157.751,59.221)
O5': (30.192,156.095,62.713)
O3': (33.127,154.709,60.094)
Image (generated by PyMOL):