Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0500:0501
Extra
PDB:
ATOM 1 O3' A A 499 23.604 152.343 62.292 1.00 54.80 O
ATOM 2 P G A 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 3 OP1 G A 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 4 OP2 G A 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 5 O5' G A 500 24.208 154.762 62.076 1.00 52.16 O
ATOM 6 C5' G A 500 25.373 154.611 61.255 1.00 53.77 C
ATOM 7 C4' G A 500 26.155 155.903 61.231 1.00 55.65 C
ATOM 8 O4' G A 500 25.389 156.924 60.535 1.00 55.65 O
ATOM 9 C3' G A 500 26.490 156.489 62.602 1.00 56.52 C
ATOM 10 O3' G A 500 27.716 157.202 62.513 1.00 58.67 O
ATOM 11 C2' G A 500 25.371 157.497 62.813 1.00 56.47 C
ATOM 12 O2' G A 500 25.742 158.524 63.712 1.00 56.14 O
ATOM 13 C1' G A 500 25.202 158.036 61.391 1.00 57.70 C
ATOM 14 N9 G A 500 23.910 158.653 61.085 1.00 58.94 N
ATOM 15 C8 G A 500 22.803 158.738 61.900 1.00 59.69 C
ATOM 16 N7 G A 500 21.804 159.367 61.343 1.00 59.96 N
ATOM 17 C5 G A 500 22.273 159.713 60.084 1.00 58.60 C
ATOM 18 C6 G A 500 21.633 160.399 59.031 1.00 57.74 C
ATOM 19 O6 G A 500 20.492 160.861 59.003 1.00 58.29 O
ATOM 20 N1 G A 500 22.464 160.529 57.925 1.00 56.37 N
ATOM 21 C2 G A 500 23.753 160.067 57.848 1.00 56.24 C
ATOM 22 N2 G A 500 24.403 160.300 56.702 1.00 56.17 N
ATOM 23 N3 G A 500 24.364 159.426 58.826 1.00 57.05 N
ATOM 24 C4 G A 500 23.570 159.282 59.907 1.00 58.27 C
ATOM 25 P A A 501 28.883 156.944 63.585 1.00 58.29 P
ATOM 26 OP1 A A 501 28.433 155.905 64.557 1.00 56.70 O
ATOM 27 OP2 A A 501 29.312 158.280 64.072 1.00 57.87 O
ATOM 28 O5' A A 501 30.061 156.338 62.707 1.00 57.20 O
TER
ATOM 1 O3' G B 500 27.716 157.202 62.513 1.00 58.67 O
ATOM 2 P A B 501 28.883 156.944 63.585 1.00 58.29 P
ATOM 3 OP1 A B 501 28.433 155.905 64.557 1.00 56.70 O
ATOM 4 OP2 A B 501 29.312 158.280 64.072 1.00 57.87 O
ATOM 5 O5' A B 501 30.061 156.338 62.707 1.00 57.20 O
ATOM 6 C5' A B 501 29.942 155.034 62.128 1.00 60.74 C
ATOM 7 C4' A B 501 30.681 154.980 60.820 1.00 63.87 C
ATOM 8 O4' A B 501 29.913 155.671 59.804 1.00 65.51 O
ATOM 9 C3' A B 501 32.056 155.623 60.838 1.00 66.84 C
ATOM 10 O3' A B 501 32.976 154.873 60.077 1.00 71.07 O
ATOM 11 C2' A B 501 31.804 157.006 60.254 1.00 67.54 C
ATOM 12 O2' A B 501 32.922 157.546 59.580 1.00 69.03 O
ATOM 13 C1' A B 501 30.654 156.755 59.281 1.00 67.15 C
ATOM 14 N9 A B 501 29.770 157.922 59.250 1.00 68.83 N
ATOM 15 C8 A B 501 28.926 158.340 60.255 1.00 69.48 C
ATOM 16 N7 A B 501 28.287 159.453 59.989 1.00 68.87 N
ATOM 17 C5 A B 501 28.727 159.789 58.719 1.00 68.99 C
ATOM 18 C6 A B 501 28.429 160.868 57.883 1.00 68.24 C
ATOM 19 N6 A B 501 27.591 161.847 58.223 1.00 67.85 N
ATOM 20 N1 A B 501 29.029 160.912 56.673 1.00 68.34 N
ATOM 21 C2 A B 501 29.875 159.926 56.342 1.00 68.71 C
ATOM 22 N3 A B 501 30.240 158.858 57.046 1.00 68.61 N
ATOM 23 C4 A B 501 29.628 158.847 58.241 1.00 69.22 C
ATOM 24 P G B 502 34.336 154.369 60.772 1.00 76.06 P
ATOM 25 OP1 G B 502 34.091 154.226 62.240 1.00 73.04 O
ATOM 26 OP2 G B 502 35.443 155.246 60.299 1.00 76.26 O
ATOM 27 O5' G B 502 34.572 152.918 60.153 1.00 78.93 O
TER
ATOM 2 P G A 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 3 OP1 G A 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 4 OP2 G A 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 5 O5' G A 500 24.208 154.762 62.076 1.00 52.16 O
ATOM 6 C5' G A 500 25.373 154.611 61.255 1.00 53.77 C
ATOM 7 C4' G A 500 26.155 155.903 61.231 1.00 55.65 C
ATOM 8 O4' G A 500 25.389 156.924 60.535 1.00 55.65 O
ATOM 9 C3' G A 500 26.490 156.489 62.602 1.00 56.52 C
ATOM 10 O3' G A 500 27.716 157.202 62.513 1.00 58.67 O
ATOM 11 C2' G A 500 25.371 157.497 62.813 1.00 56.47 C
ATOM 12 O2' G A 500 25.742 158.524 63.712 1.00 56.14 O
ATOM 13 C1' G A 500 25.202 158.036 61.391 1.00 57.70 C
ATOM 14 N9 G A 500 23.910 158.653 61.085 1.00 58.94 N
ATOM 15 C8 G A 500 22.803 158.738 61.900 1.00 59.69 C
ATOM 16 N7 G A 500 21.804 159.367 61.343 1.00 59.96 N
ATOM 17 C5 G A 500 22.273 159.713 60.084 1.00 58.60 C
ATOM 18 C6 G A 500 21.633 160.399 59.031 1.00 57.74 C
ATOM 19 O6 G A 500 20.492 160.861 59.003 1.00 58.29 O
ATOM 20 N1 G A 500 22.464 160.529 57.925 1.00 56.37 N
ATOM 21 C2 G A 500 23.753 160.067 57.848 1.00 56.24 C
ATOM 22 N2 G A 500 24.403 160.300 56.702 1.00 56.17 N
ATOM 23 N3 G A 500 24.364 159.426 58.826 1.00 57.05 N
ATOM 24 C4 G A 500 23.570 159.282 59.907 1.00 58.27 C
ATOM 25 P A A 501 28.883 156.944 63.585 1.00 58.29 P
ATOM 26 OP1 A A 501 28.433 155.905 64.557 1.00 56.70 O
ATOM 27 OP2 A A 501 29.312 158.280 64.072 1.00 57.87 O
ATOM 28 O5' A A 501 30.061 156.338 62.707 1.00 57.20 O
TER
ATOM 1 O3' G B 500 27.716 157.202 62.513 1.00 58.67 O
ATOM 2 P A B 501 28.883 156.944 63.585 1.00 58.29 P
ATOM 3 OP1 A B 501 28.433 155.905 64.557 1.00 56.70 O
ATOM 4 OP2 A B 501 29.312 158.280 64.072 1.00 57.87 O
ATOM 5 O5' A B 501 30.061 156.338 62.707 1.00 57.20 O
ATOM 6 C5' A B 501 29.942 155.034 62.128 1.00 60.74 C
ATOM 7 C4' A B 501 30.681 154.980 60.820 1.00 63.87 C
ATOM 8 O4' A B 501 29.913 155.671 59.804 1.00 65.51 O
ATOM 9 C3' A B 501 32.056 155.623 60.838 1.00 66.84 C
ATOM 10 O3' A B 501 32.976 154.873 60.077 1.00 71.07 O
ATOM 11 C2' A B 501 31.804 157.006 60.254 1.00 67.54 C
ATOM 12 O2' A B 501 32.922 157.546 59.580 1.00 69.03 O
ATOM 13 C1' A B 501 30.654 156.755 59.281 1.00 67.15 C
ATOM 14 N9 A B 501 29.770 157.922 59.250 1.00 68.83 N
ATOM 15 C8 A B 501 28.926 158.340 60.255 1.00 69.48 C
ATOM 16 N7 A B 501 28.287 159.453 59.989 1.00 68.87 N
ATOM 17 C5 A B 501 28.727 159.789 58.719 1.00 68.99 C
ATOM 18 C6 A B 501 28.429 160.868 57.883 1.00 68.24 C
ATOM 19 N6 A B 501 27.591 161.847 58.223 1.00 67.85 N
ATOM 20 N1 A B 501 29.029 160.912 56.673 1.00 68.34 N
ATOM 21 C2 A B 501 29.875 159.926 56.342 1.00 68.71 C
ATOM 22 N3 A B 501 30.240 158.858 57.046 1.00 68.61 N
ATOM 23 C4 A B 501 29.628 158.847 58.241 1.00 69.22 C
ATOM 24 P G B 502 34.336 154.369 60.772 1.00 76.06 P
ATOM 25 OP1 G B 502 34.091 154.226 62.240 1.00 73.04 O
ATOM 26 OP2 G B 502 35.443 155.246 60.299 1.00 76.26 O
ATOM 27 O5' G B 502 34.572 152.918 60.153 1.00 78.93 O
TER
Atoms:
OP1: (24.999,153.416,64.028)
OP2: (22.545,154.068,63.775)
C3': (26.490,156.489,62.602)
C1': (25.202,158.036,61.391)
C5': (25.373,154.611,61.255)
O6: (20.492,160.861,59.003)
O4': (25.389,156.924,60.535)
C8: (22.803,158.738,61.900)
C2: (23.753,160.067,57.848)
C6: (21.633,160.399,59.031)
C5: (22.273,159.713,60.084)
C4: (23.570,159.282,59.907)
P: (23.829,153.668,63.162)
C4': (26.155,155.903,61.231)
C2': (25.371,157.497,62.813)
O2': (25.742,158.524,63.712)
N1: (22.464,160.529,57.925)
N2: (24.403,160.300,56.702)
N3: (24.364,159.426,58.826)
N7: (21.804,159.367,61.343)
N9: (23.910,158.653,61.085)
O5': (24.208,154.762,62.076)
O3': (27.716,157.202,62.513)
OP2: (22.545,154.068,63.775)
C3': (26.490,156.489,62.602)
C1': (25.202,158.036,61.391)
C5': (25.373,154.611,61.255)
O6: (20.492,160.861,59.003)
O4': (25.389,156.924,60.535)
C8: (22.803,158.738,61.900)
C2: (23.753,160.067,57.848)
C6: (21.633,160.399,59.031)
C5: (22.273,159.713,60.084)
C4: (23.570,159.282,59.907)
P: (23.829,153.668,63.162)
C4': (26.155,155.903,61.231)
C2': (25.371,157.497,62.813)
O2': (25.742,158.524,63.712)
N1: (22.464,160.529,57.925)
N2: (24.403,160.300,56.702)
N3: (24.364,159.426,58.826)
N7: (21.804,159.367,61.343)
N9: (23.910,158.653,61.085)
O5': (24.208,154.762,62.076)
O3': (27.716,157.202,62.513)
OP1: (28.433,155.905,64.557)
OP2: (29.312,158.280,64.072)
C3': (32.056,155.623,60.838)
C1': (30.654,156.755,59.281)
C5': (29.942,155.034,62.128)
O4': (29.913,155.671,59.804)
C8: (28.926,158.340,60.255)
O2': (32.922,157.546,59.580)
C6: (28.429,160.868,57.883)
C5: (28.727,159.789,58.719)
C4: (29.628,158.847,58.241)
P: (28.883,156.944,63.585)
C4': (30.681,154.980,60.820)
C2': (31.804,157.006,60.254)
C2: (29.875,159.926,56.342)
N1: (29.029,160.912,56.673)
N3: (30.240,158.858,57.046)
N6: (27.591,161.847,58.223)
N7: (28.287,159.453,59.989)
N9: (29.770,157.922,59.250)
O5': (30.061,156.338,62.707)
O3': (32.976,154.873,60.077)
OP2: (29.312,158.280,64.072)
C3': (32.056,155.623,60.838)
C1': (30.654,156.755,59.281)
C5': (29.942,155.034,62.128)
O4': (29.913,155.671,59.804)
C8: (28.926,158.340,60.255)
O2': (32.922,157.546,59.580)
C6: (28.429,160.868,57.883)
C5: (28.727,159.789,58.719)
C4: (29.628,158.847,58.241)
P: (28.883,156.944,63.585)
C4': (30.681,154.980,60.820)
C2': (31.804,157.006,60.254)
C2: (29.875,159.926,56.342)
N1: (29.029,160.912,56.673)
N3: (30.240,158.858,57.046)
N6: (27.591,161.847,58.223)
N7: (28.287,159.453,59.989)
N9: (29.770,157.922,59.250)
O5': (30.061,156.338,62.707)
O3': (32.976,154.873,60.077)
Image (generated by PyMOL):