Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0500:0501
Extra
PDB:
ATOM 1 O3' A A 499 23.457 152.125 62.262 1.00 45.86 O
ATOM 2 P G A 500 23.706 153.439 63.143 1.00 42.66 P
ATOM 3 OP1 G A 500 24.894 153.165 63.985 1.00 43.46 O
ATOM 4 OP2 G A 500 22.437 153.856 63.782 1.00 42.65 O
ATOM 5 O5' G A 500 24.110 154.527 62.064 1.00 42.52 O
ATOM 6 C5' G A 500 25.267 154.340 61.239 1.00 44.80 C
ATOM 7 C4' G A 500 26.077 155.611 61.193 1.00 45.59 C
ATOM 8 O4' G A 500 25.306 156.641 60.514 1.00 44.57 O
ATOM 9 C3' G A 500 26.450 156.191 62.557 1.00 46.81 C
ATOM 10 O3' G A 500 27.683 156.892 62.431 1.00 49.88 O
ATOM 11 C2' G A 500 25.327 157.191 62.796 1.00 46.32 C
ATOM 12 O2' G A 500 25.674 158.218 63.703 1.00 46.16 O
ATOM 13 C1' G A 500 25.131 157.742 61.384 1.00 46.15 C
ATOM 14 N9 G A 500 23.836 158.362 61.115 1.00 45.70 N
ATOM 15 C8 G A 500 22.775 158.491 61.983 1.00 45.60 C
ATOM 16 N7 G A 500 21.770 159.143 61.468 1.00 45.72 N
ATOM 17 C5 G A 500 22.184 159.455 60.181 1.00 45.16 C
ATOM 18 C6 G A 500 21.517 160.157 59.160 1.00 45.42 C
ATOM 19 O6 G A 500 20.402 160.680 59.196 1.00 47.29 O
ATOM 20 N1 G A 500 22.283 160.227 58.001 1.00 44.07 N
ATOM 21 C2 G A 500 23.535 159.693 57.851 1.00 42.76 C
ATOM 22 N2 G A 500 24.100 159.844 56.648 1.00 41.84 N
ATOM 23 N3 G A 500 24.181 159.052 58.808 1.00 43.21 N
ATOM 24 C4 G A 500 23.449 158.967 59.940 1.00 44.87 C
ATOM 25 P A A 501 28.791 156.805 63.590 1.00 51.43 P
ATOM 26 OP1 A A 501 28.347 155.819 64.612 1.00 49.80 O
ATOM 27 OP2 A A 501 29.111 158.199 63.994 1.00 51.54 O
ATOM 28 O5' A A 501 30.065 156.215 62.841 1.00 51.65 O
TER
ATOM 1 O3' G B 500 27.683 156.892 62.431 1.00 49.88 O
ATOM 2 P A B 501 28.791 156.805 63.590 1.00 51.43 P
ATOM 3 OP1 A B 501 28.347 155.819 64.612 1.00 49.80 O
ATOM 4 OP2 A B 501 29.111 158.199 63.994 1.00 51.54 O
ATOM 5 O5' A B 501 30.065 156.215 62.841 1.00 51.65 O
ATOM 6 C5' A B 501 30.073 154.863 62.379 1.00 54.66 C
ATOM 7 C4' A B 501 30.758 154.771 61.042 1.00 57.55 C
ATOM 8 O4' A B 501 29.918 155.381 60.029 1.00 57.88 O
ATOM 9 C3' A B 501 32.116 155.445 60.953 1.00 60.01 C
ATOM 10 O3' A B 501 33.013 154.668 60.184 1.00 64.49 O
ATOM 11 C2' A B 501 31.803 156.771 60.276 1.00 60.15 C
ATOM 12 O2' A B 501 32.876 157.260 59.500 1.00 61.99 O
ATOM 13 C1' A B 501 30.617 156.423 59.381 1.00 58.79 C
ATOM 14 N9 A B 501 29.720 157.577 59.305 1.00 59.90 N
ATOM 15 C8 A B 501 28.892 158.035 60.303 1.00 60.40 C
ATOM 16 N7 A B 501 28.238 159.128 59.995 1.00 60.53 N
ATOM 17 C5 A B 501 28.651 159.405 58.702 1.00 61.66 C
ATOM 18 C6 A B 501 28.328 160.445 57.816 1.00 62.30 C
ATOM 19 N6 A B 501 27.485 161.434 58.121 1.00 62.07 N
ATOM 20 N1 A B 501 28.911 160.435 56.595 1.00 62.50 N
ATOM 21 C2 A B 501 29.762 159.439 56.300 1.00 62.32 C
ATOM 22 N3 A B 501 30.147 158.406 57.052 1.00 61.86 N
ATOM 23 C4 A B 501 29.552 158.448 58.255 1.00 61.42 C
ATOM 24 P G B 502 34.415 154.215 60.831 1.00 69.24 P
ATOM 25 OP1 G B 502 34.258 154.095 62.314 1.00 66.69 O
ATOM 26 OP2 G B 502 35.471 155.105 60.276 1.00 68.62 O
ATOM 27 O5' G B 502 34.650 152.746 60.254 1.00 72.37 O
TER
ATOM 2 P G A 500 23.706 153.439 63.143 1.00 42.66 P
ATOM 3 OP1 G A 500 24.894 153.165 63.985 1.00 43.46 O
ATOM 4 OP2 G A 500 22.437 153.856 63.782 1.00 42.65 O
ATOM 5 O5' G A 500 24.110 154.527 62.064 1.00 42.52 O
ATOM 6 C5' G A 500 25.267 154.340 61.239 1.00 44.80 C
ATOM 7 C4' G A 500 26.077 155.611 61.193 1.00 45.59 C
ATOM 8 O4' G A 500 25.306 156.641 60.514 1.00 44.57 O
ATOM 9 C3' G A 500 26.450 156.191 62.557 1.00 46.81 C
ATOM 10 O3' G A 500 27.683 156.892 62.431 1.00 49.88 O
ATOM 11 C2' G A 500 25.327 157.191 62.796 1.00 46.32 C
ATOM 12 O2' G A 500 25.674 158.218 63.703 1.00 46.16 O
ATOM 13 C1' G A 500 25.131 157.742 61.384 1.00 46.15 C
ATOM 14 N9 G A 500 23.836 158.362 61.115 1.00 45.70 N
ATOM 15 C8 G A 500 22.775 158.491 61.983 1.00 45.60 C
ATOM 16 N7 G A 500 21.770 159.143 61.468 1.00 45.72 N
ATOM 17 C5 G A 500 22.184 159.455 60.181 1.00 45.16 C
ATOM 18 C6 G A 500 21.517 160.157 59.160 1.00 45.42 C
ATOM 19 O6 G A 500 20.402 160.680 59.196 1.00 47.29 O
ATOM 20 N1 G A 500 22.283 160.227 58.001 1.00 44.07 N
ATOM 21 C2 G A 500 23.535 159.693 57.851 1.00 42.76 C
ATOM 22 N2 G A 500 24.100 159.844 56.648 1.00 41.84 N
ATOM 23 N3 G A 500 24.181 159.052 58.808 1.00 43.21 N
ATOM 24 C4 G A 500 23.449 158.967 59.940 1.00 44.87 C
ATOM 25 P A A 501 28.791 156.805 63.590 1.00 51.43 P
ATOM 26 OP1 A A 501 28.347 155.819 64.612 1.00 49.80 O
ATOM 27 OP2 A A 501 29.111 158.199 63.994 1.00 51.54 O
ATOM 28 O5' A A 501 30.065 156.215 62.841 1.00 51.65 O
TER
ATOM 1 O3' G B 500 27.683 156.892 62.431 1.00 49.88 O
ATOM 2 P A B 501 28.791 156.805 63.590 1.00 51.43 P
ATOM 3 OP1 A B 501 28.347 155.819 64.612 1.00 49.80 O
ATOM 4 OP2 A B 501 29.111 158.199 63.994 1.00 51.54 O
ATOM 5 O5' A B 501 30.065 156.215 62.841 1.00 51.65 O
ATOM 6 C5' A B 501 30.073 154.863 62.379 1.00 54.66 C
ATOM 7 C4' A B 501 30.758 154.771 61.042 1.00 57.55 C
ATOM 8 O4' A B 501 29.918 155.381 60.029 1.00 57.88 O
ATOM 9 C3' A B 501 32.116 155.445 60.953 1.00 60.01 C
ATOM 10 O3' A B 501 33.013 154.668 60.184 1.00 64.49 O
ATOM 11 C2' A B 501 31.803 156.771 60.276 1.00 60.15 C
ATOM 12 O2' A B 501 32.876 157.260 59.500 1.00 61.99 O
ATOM 13 C1' A B 501 30.617 156.423 59.381 1.00 58.79 C
ATOM 14 N9 A B 501 29.720 157.577 59.305 1.00 59.90 N
ATOM 15 C8 A B 501 28.892 158.035 60.303 1.00 60.40 C
ATOM 16 N7 A B 501 28.238 159.128 59.995 1.00 60.53 N
ATOM 17 C5 A B 501 28.651 159.405 58.702 1.00 61.66 C
ATOM 18 C6 A B 501 28.328 160.445 57.816 1.00 62.30 C
ATOM 19 N6 A B 501 27.485 161.434 58.121 1.00 62.07 N
ATOM 20 N1 A B 501 28.911 160.435 56.595 1.00 62.50 N
ATOM 21 C2 A B 501 29.762 159.439 56.300 1.00 62.32 C
ATOM 22 N3 A B 501 30.147 158.406 57.052 1.00 61.86 N
ATOM 23 C4 A B 501 29.552 158.448 58.255 1.00 61.42 C
ATOM 24 P G B 502 34.415 154.215 60.831 1.00 69.24 P
ATOM 25 OP1 G B 502 34.258 154.095 62.314 1.00 66.69 O
ATOM 26 OP2 G B 502 35.471 155.105 60.276 1.00 68.62 O
ATOM 27 O5' G B 502 34.650 152.746 60.254 1.00 72.37 O
TER
Atoms:
OP1: (24.894,153.165,63.985)
OP2: (22.437,153.856,63.782)
C3': (26.450,156.191,62.557)
C1': (25.131,157.742,61.384)
C5': (25.267,154.340,61.239)
O6: (20.402,160.680,59.196)
O4': (25.306,156.641,60.514)
C8: (22.775,158.491,61.983)
C2: (23.535,159.693,57.851)
C6: (21.517,160.157,59.160)
C5: (22.184,159.455,60.181)
C4: (23.449,158.967,59.940)
P: (23.706,153.439,63.143)
C4': (26.077,155.611,61.193)
C2': (25.327,157.191,62.796)
O2': (25.674,158.218,63.703)
N1: (22.283,160.227,58.001)
N2: (24.100,159.844,56.648)
N3: (24.181,159.052,58.808)
N7: (21.770,159.143,61.468)
N9: (23.836,158.362,61.115)
O5': (24.110,154.527,62.064)
O3': (27.683,156.892,62.431)
OP2: (22.437,153.856,63.782)
C3': (26.450,156.191,62.557)
C1': (25.131,157.742,61.384)
C5': (25.267,154.340,61.239)
O6: (20.402,160.680,59.196)
O4': (25.306,156.641,60.514)
C8: (22.775,158.491,61.983)
C2: (23.535,159.693,57.851)
C6: (21.517,160.157,59.160)
C5: (22.184,159.455,60.181)
C4: (23.449,158.967,59.940)
P: (23.706,153.439,63.143)
C4': (26.077,155.611,61.193)
C2': (25.327,157.191,62.796)
O2': (25.674,158.218,63.703)
N1: (22.283,160.227,58.001)
N2: (24.100,159.844,56.648)
N3: (24.181,159.052,58.808)
N7: (21.770,159.143,61.468)
N9: (23.836,158.362,61.115)
O5': (24.110,154.527,62.064)
O3': (27.683,156.892,62.431)
OP1: (28.347,155.819,64.612)
OP2: (29.111,158.199,63.994)
C3': (32.116,155.445,60.953)
C1': (30.617,156.423,59.381)
C5': (30.073,154.863,62.379)
O4': (29.918,155.381,60.029)
C8: (28.892,158.035,60.303)
O2': (32.876,157.260,59.500)
C6: (28.328,160.445,57.816)
C5: (28.651,159.405,58.702)
C4: (29.552,158.448,58.255)
P: (28.791,156.805,63.590)
C4': (30.758,154.771,61.042)
C2': (31.803,156.771,60.276)
C2: (29.762,159.439,56.300)
N1: (28.911,160.435,56.595)
N3: (30.147,158.406,57.052)
N6: (27.485,161.434,58.121)
N7: (28.238,159.128,59.995)
N9: (29.720,157.577,59.305)
O5': (30.065,156.215,62.841)
O3': (33.013,154.668,60.184)
OP2: (29.111,158.199,63.994)
C3': (32.116,155.445,60.953)
C1': (30.617,156.423,59.381)
C5': (30.073,154.863,62.379)
O4': (29.918,155.381,60.029)
C8: (28.892,158.035,60.303)
O2': (32.876,157.260,59.500)
C6: (28.328,160.445,57.816)
C5: (28.651,159.405,58.702)
C4: (29.552,158.448,58.255)
P: (28.791,156.805,63.590)
C4': (30.758,154.771,61.042)
C2': (31.803,156.771,60.276)
C2: (29.762,159.439,56.300)
N1: (28.911,160.435,56.595)
N3: (30.147,158.406,57.052)
N6: (27.485,161.434,58.121)
N7: (28.238,159.128,59.995)
N9: (29.720,157.577,59.305)
O5': (30.065,156.215,62.841)
O3': (33.013,154.668,60.184)
Image (generated by PyMOL):