Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2424:A2425
Extra
PDB:
ATOM 1 O3' A A2423 -94.241 -49.773 40.176 1.00 0.14 O
ATOM 2 P U A2424 -94.861 -48.657 41.141 1.00 0.01 P
ATOM 3 OP1 U A2424 -94.889 -49.230 42.520 1.00 0.01 O
ATOM 4 OP2 U A2424 -96.114 -48.186 40.547 1.00 0.01 O
ATOM 5 O5' U A2424 -93.768 -47.518 41.037 1.00 0.01 O
ATOM 6 C5' U A2424 -92.553 -47.605 41.751 1.00 0.01 C
ATOM 7 C4' U A2424 -91.934 -46.250 41.896 1.00 0.01 C
ATOM 8 O4' U A2424 -91.338 -45.880 40.645 1.00 0.01 O
ATOM 9 C3' U A2424 -92.896 -45.111 42.195 1.00 0.01 C
ATOM 10 O3' U A2424 -93.219 -44.998 43.560 1.00 0.01 O
ATOM 11 C2' U A2424 -92.158 -43.920 41.668 1.00 0.01 C
ATOM 12 O2' U A2424 -91.157 -43.535 42.574 1.00 0.01 O
ATOM 13 C1' U A2424 -91.494 -44.508 40.431 1.00 0.01 C
ATOM 14 N1 U A2424 -92.309 -44.321 39.221 1.00 0.09 N
ATOM 15 C2 U A2424 -91.996 -43.191 38.543 1.00 0.09 C
ATOM 16 O2 U A2424 -91.140 -42.451 38.967 1.00 0.09 O
ATOM 17 N3 U A2424 -92.711 -42.961 37.406 1.00 0.09 N
ATOM 18 C4 U A2424 -93.706 -43.737 36.892 1.00 0.09 C
ATOM 19 O4 U A2424 -94.230 -43.361 35.853 1.00 0.09 O
ATOM 20 C5 U A2424 -93.986 -44.917 37.661 1.00 0.09 C
ATOM 21 C6 U A2424 -93.293 -45.169 38.781 1.00 0.09 C
ATOM 22 P A A2425 -94.705 -44.619 43.993 1.00 0.01 P
ATOM 23 OP1 A A2425 -94.887 -45.066 45.362 1.00 0.01 O
ATOM 24 OP2 A A2425 -95.621 -45.138 42.947 1.00 0.01 O
ATOM 25 O5' A A2425 -94.673 -43.048 43.943 1.00 0.01 O
TER
ATOM 1 O3' U B2424 -93.219 -44.998 43.560 1.00 0.01 O
ATOM 2 P A B2425 -94.705 -44.619 43.993 1.00 0.01 P
ATOM 3 OP1 A B2425 -94.887 -45.066 45.362 1.00 0.01 O
ATOM 4 OP2 A B2425 -95.621 -45.138 42.947 1.00 0.01 O
ATOM 5 O5' A B2425 -94.673 -43.048 43.943 1.00 0.01 O
ATOM 6 C5' A B2425 -95.810 -42.316 43.540 1.00 0.01 C
ATOM 7 C4' A B2425 -95.506 -40.853 43.500 1.00 0.01 C
ATOM 8 O4' A B2425 -94.795 -40.492 44.687 1.00 0.01 O
ATOM 9 C3' A B2425 -94.602 -40.422 42.379 1.00 0.01 C
ATOM 10 O3' A B2425 -95.308 -40.174 41.215 1.00 0.01 O
ATOM 11 C2' A B2425 -93.903 -39.201 42.919 1.00 0.01 C
ATOM 12 O2' A B2425 -94.710 -38.038 42.752 1.00 0.01 O
ATOM 13 C1' A B2425 -93.822 -39.536 44.395 1.00 0.01 C
ATOM 14 N9 A B2425 -92.529 -40.082 44.808 1.00 0.21 N
ATOM 15 C8 A B2425 -92.322 -41.344 45.282 1.00 0.21 C
ATOM 16 N7 A B2425 -91.096 -41.556 45.706 1.00 0.21 N
ATOM 17 C5 A B2425 -90.490 -40.340 45.529 1.00 0.21 C
ATOM 18 C6 A B2425 -89.206 -39.928 45.806 1.00 0.21 C
ATOM 19 N6 A B2425 -88.300 -40.740 46.310 1.00 0.21 N
ATOM 20 N1 A B2425 -88.892 -38.652 45.539 1.00 0.21 N
ATOM 21 C2 A B2425 -89.836 -37.847 45.021 1.00 0.21 C
ATOM 22 N3 A B2425 -91.100 -38.113 44.716 1.00 0.21 N
ATOM 23 C4 A B2425 -91.359 -39.403 45.005 1.00 0.21 C
ATOM 24 P A B2426 -94.937 -40.978 39.922 1.00 0.01 P
ATOM 25 OP1 A B2426 -96.111 -40.901 39.033 1.00 0.01 O
ATOM 26 OP2 A B2426 -94.460 -42.304 40.348 1.00 0.01 O
ATOM 27 O5' A B2426 -93.727 -40.114 39.337 1.00 0.01 O
TER
ATOM 2 P U A2424 -94.861 -48.657 41.141 1.00 0.01 P
ATOM 3 OP1 U A2424 -94.889 -49.230 42.520 1.00 0.01 O
ATOM 4 OP2 U A2424 -96.114 -48.186 40.547 1.00 0.01 O
ATOM 5 O5' U A2424 -93.768 -47.518 41.037 1.00 0.01 O
ATOM 6 C5' U A2424 -92.553 -47.605 41.751 1.00 0.01 C
ATOM 7 C4' U A2424 -91.934 -46.250 41.896 1.00 0.01 C
ATOM 8 O4' U A2424 -91.338 -45.880 40.645 1.00 0.01 O
ATOM 9 C3' U A2424 -92.896 -45.111 42.195 1.00 0.01 C
ATOM 10 O3' U A2424 -93.219 -44.998 43.560 1.00 0.01 O
ATOM 11 C2' U A2424 -92.158 -43.920 41.668 1.00 0.01 C
ATOM 12 O2' U A2424 -91.157 -43.535 42.574 1.00 0.01 O
ATOM 13 C1' U A2424 -91.494 -44.508 40.431 1.00 0.01 C
ATOM 14 N1 U A2424 -92.309 -44.321 39.221 1.00 0.09 N
ATOM 15 C2 U A2424 -91.996 -43.191 38.543 1.00 0.09 C
ATOM 16 O2 U A2424 -91.140 -42.451 38.967 1.00 0.09 O
ATOM 17 N3 U A2424 -92.711 -42.961 37.406 1.00 0.09 N
ATOM 18 C4 U A2424 -93.706 -43.737 36.892 1.00 0.09 C
ATOM 19 O4 U A2424 -94.230 -43.361 35.853 1.00 0.09 O
ATOM 20 C5 U A2424 -93.986 -44.917 37.661 1.00 0.09 C
ATOM 21 C6 U A2424 -93.293 -45.169 38.781 1.00 0.09 C
ATOM 22 P A A2425 -94.705 -44.619 43.993 1.00 0.01 P
ATOM 23 OP1 A A2425 -94.887 -45.066 45.362 1.00 0.01 O
ATOM 24 OP2 A A2425 -95.621 -45.138 42.947 1.00 0.01 O
ATOM 25 O5' A A2425 -94.673 -43.048 43.943 1.00 0.01 O
TER
ATOM 1 O3' U B2424 -93.219 -44.998 43.560 1.00 0.01 O
ATOM 2 P A B2425 -94.705 -44.619 43.993 1.00 0.01 P
ATOM 3 OP1 A B2425 -94.887 -45.066 45.362 1.00 0.01 O
ATOM 4 OP2 A B2425 -95.621 -45.138 42.947 1.00 0.01 O
ATOM 5 O5' A B2425 -94.673 -43.048 43.943 1.00 0.01 O
ATOM 6 C5' A B2425 -95.810 -42.316 43.540 1.00 0.01 C
ATOM 7 C4' A B2425 -95.506 -40.853 43.500 1.00 0.01 C
ATOM 8 O4' A B2425 -94.795 -40.492 44.687 1.00 0.01 O
ATOM 9 C3' A B2425 -94.602 -40.422 42.379 1.00 0.01 C
ATOM 10 O3' A B2425 -95.308 -40.174 41.215 1.00 0.01 O
ATOM 11 C2' A B2425 -93.903 -39.201 42.919 1.00 0.01 C
ATOM 12 O2' A B2425 -94.710 -38.038 42.752 1.00 0.01 O
ATOM 13 C1' A B2425 -93.822 -39.536 44.395 1.00 0.01 C
ATOM 14 N9 A B2425 -92.529 -40.082 44.808 1.00 0.21 N
ATOM 15 C8 A B2425 -92.322 -41.344 45.282 1.00 0.21 C
ATOM 16 N7 A B2425 -91.096 -41.556 45.706 1.00 0.21 N
ATOM 17 C5 A B2425 -90.490 -40.340 45.529 1.00 0.21 C
ATOM 18 C6 A B2425 -89.206 -39.928 45.806 1.00 0.21 C
ATOM 19 N6 A B2425 -88.300 -40.740 46.310 1.00 0.21 N
ATOM 20 N1 A B2425 -88.892 -38.652 45.539 1.00 0.21 N
ATOM 21 C2 A B2425 -89.836 -37.847 45.021 1.00 0.21 C
ATOM 22 N3 A B2425 -91.100 -38.113 44.716 1.00 0.21 N
ATOM 23 C4 A B2425 -91.359 -39.403 45.005 1.00 0.21 C
ATOM 24 P A B2426 -94.937 -40.978 39.922 1.00 0.01 P
ATOM 25 OP1 A B2426 -96.111 -40.901 39.033 1.00 0.01 O
ATOM 26 OP2 A B2426 -94.460 -42.304 40.348 1.00 0.01 O
ATOM 27 O5' A B2426 -93.727 -40.114 39.337 1.00 0.01 O
TER
Atoms:
C4: (-93.706,-43.737,36.892)
N3: (-92.711,-42.961,37.406)
OP1: (-94.889,-49.230,42.520)
OP2: (-96.114,-48.186,40.547)
C2: (-91.996,-43.191,38.543)
C1': (-91.494,-44.508,40.431)
C3': (-92.896,-45.111,42.195)
O5': (-93.768,-47.518,41.037)
O4': (-91.338,-45.880,40.645)
C5': (-92.553,-47.605,41.751)
P: (-94.861,-48.657,41.141)
C4': (-91.934,-46.250,41.896)
C2': (-92.158,-43.920,41.668)
O2': (-91.157,-43.535,42.574)
N1: (-92.309,-44.321,39.221)
O4: (-94.230,-43.361,35.853)
O2: (-91.140,-42.451,38.967)
C6: (-93.293,-45.169,38.781)
C5: (-93.986,-44.917,37.661)
O3': (-93.219,-44.998,43.560)
N3: (-92.711,-42.961,37.406)
OP1: (-94.889,-49.230,42.520)
OP2: (-96.114,-48.186,40.547)
C2: (-91.996,-43.191,38.543)
C1': (-91.494,-44.508,40.431)
C3': (-92.896,-45.111,42.195)
O5': (-93.768,-47.518,41.037)
O4': (-91.338,-45.880,40.645)
C5': (-92.553,-47.605,41.751)
P: (-94.861,-48.657,41.141)
C4': (-91.934,-46.250,41.896)
C2': (-92.158,-43.920,41.668)
O2': (-91.157,-43.535,42.574)
N1: (-92.309,-44.321,39.221)
O4: (-94.230,-43.361,35.853)
O2: (-91.140,-42.451,38.967)
C6: (-93.293,-45.169,38.781)
C5: (-93.986,-44.917,37.661)
O3': (-93.219,-44.998,43.560)
OP1: (-94.887,-45.066,45.362)
OP2: (-95.621,-45.138,42.947)
C3': (-94.602,-40.422,42.379)
C1': (-93.822,-39.536,44.395)
C5': (-95.810,-42.316,43.540)
O4': (-94.795,-40.492,44.687)
C8: (-92.322,-41.344,45.282)
O2': (-94.710,-38.038,42.752)
C6: (-89.206,-39.928,45.806)
C5: (-90.490,-40.340,45.529)
C4: (-91.359,-39.403,45.005)
P: (-94.705,-44.619,43.993)
C4': (-95.506,-40.853,43.500)
C2': (-93.903,-39.201,42.919)
C2: (-89.836,-37.847,45.021)
N1: (-88.892,-38.652,45.539)
N3: (-91.100,-38.113,44.716)
N6: (-88.300,-40.740,46.310)
N7: (-91.096,-41.556,45.706)
N9: (-92.529,-40.082,44.808)
O5': (-94.673,-43.048,43.943)
O3': (-95.308,-40.174,41.215)
OP2: (-95.621,-45.138,42.947)
C3': (-94.602,-40.422,42.379)
C1': (-93.822,-39.536,44.395)
C5': (-95.810,-42.316,43.540)
O4': (-94.795,-40.492,44.687)
C8: (-92.322,-41.344,45.282)
O2': (-94.710,-38.038,42.752)
C6: (-89.206,-39.928,45.806)
C5: (-90.490,-40.340,45.529)
C4: (-91.359,-39.403,45.005)
P: (-94.705,-44.619,43.993)
C4': (-95.506,-40.853,43.500)
C2': (-93.903,-39.201,42.919)
C2: (-89.836,-37.847,45.021)
N1: (-88.892,-38.652,45.539)
N3: (-91.100,-38.113,44.716)
N6: (-88.300,-40.740,46.310)
N7: (-91.096,-41.556,45.706)
N9: (-92.529,-40.082,44.808)
O5': (-94.673,-43.048,43.943)
O3': (-95.308,-40.174,41.215)
Image (generated by PyMOL):