Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12076:12077
Extra
PDB:
ATOM 1 O3' U A2075 -14.665 -29.668 75.585 1.00 91.52 O
ATOM 2 P U A2076 -14.922 -29.987 77.142 1.00 81.65 P
ATOM 3 OP1 U A2076 -13.849 -30.924 77.581 1.00 81.50 O
ATOM 4 OP2 U A2076 -16.339 -30.403 77.284 1.00 82.05 O
ATOM 5 O5' U A2076 -14.712 -28.565 77.835 1.00 81.47 O
ATOM 6 C5' U A2076 -13.516 -27.812 77.645 1.00 81.10 C
ATOM 7 C4' U A2076 -13.529 -26.545 78.464 1.00 81.01 C
ATOM 8 O4' U A2076 -14.566 -25.664 77.980 1.00 81.17 O
ATOM 9 C3' U A2076 -13.856 -26.704 79.942 1.00 81.16 C
ATOM 10 O3' U A2076 -12.753 -27.174 80.719 1.00 80.98 O
ATOM 11 C2' U A2076 -14.330 -25.307 80.316 1.00 81.18 C
ATOM 12 O2' U A2076 -13.229 -24.426 80.475 1.00 80.85 O
ATOM 13 C1' U A2076 -15.077 -24.900 79.051 1.00 81.27 C
ATOM 14 N1 U A2076 -16.540 -25.126 79.157 1.00 81.66 N
ATOM 15 C2 U A2076 -17.305 -24.164 79.815 1.00 81.81 C
ATOM 16 O2 U A2076 -16.835 -23.157 80.306 1.00 81.65 O
ATOM 17 N3 U A2076 -18.660 -24.411 79.887 1.00 82.19 N
ATOM 18 C4 U A2076 -19.334 -25.491 79.363 1.00 82.43 C
ATOM 19 O4 U A2076 -20.557 -25.561 79.495 1.00 82.77 O
ATOM 20 C5 U A2076 -18.485 -26.438 78.695 1.00 82.26 C
ATOM 21 C6 U A2076 -17.158 -26.231 78.617 1.00 81.89 C
ATOM 22 P A A2077 -13.005 -28.054 82.053 1.00 61.97 P
ATOM 23 OP1 A A2077 -11.666 -28.584 82.488 1.00 61.74 O
ATOM 24 OP2 A A2077 -14.116 -29.005 81.750 1.00 62.31 O
ATOM 25 O5' A A2077 -13.523 -26.976 83.094 1.00 62.05 O
TER
ATOM 1 O3' U B2076 -12.753 -27.174 80.719 1.00 80.98 O
ATOM 2 P A B2077 -13.005 -28.054 82.053 1.00 61.97 P
ATOM 3 OP1 A B2077 -11.666 -28.584 82.488 1.00 61.74 O
ATOM 4 OP2 A B2077 -14.116 -29.005 81.750 1.00 62.31 O
ATOM 5 O5' A B2077 -13.523 -26.976 83.094 1.00 62.05 O
ATOM 6 C5' A B2077 -14.118 -27.358 84.320 1.00 62.31 C
ATOM 7 C4' A B2077 -14.370 -26.147 85.168 1.00 62.33 C
ATOM 8 O4' A B2077 -13.107 -25.517 85.487 1.00 62.01 O
ATOM 9 C3' A B2077 -15.182 -25.054 84.498 1.00 62.39 C
ATOM 10 O3' A B2077 -16.573 -25.274 84.641 1.00 62.76 O
ATOM 11 C2' A B2077 -14.699 -23.785 85.186 1.00 62.23 C
ATOM 12 O2' A B2077 -15.391 -23.597 86.412 1.00 62.49 O
ATOM 13 C1' A B2077 -13.243 -24.126 85.507 1.00 61.94 C
ATOM 14 N9 A B2077 -12.279 -23.575 84.549 1.00 61.60 N
ATOM 15 C8 A B2077 -11.657 -24.309 83.594 1.00 61.44 C
ATOM 16 N7 A B2077 -10.784 -23.651 82.875 1.00 61.14 N
ATOM 17 C5 A B2077 -10.807 -22.395 83.420 1.00 61.11 C
ATOM 18 C6 A B2077 -10.091 -21.246 83.101 1.00 60.86 C
ATOM 19 N6 A B2077 -9.195 -21.168 82.121 1.00 60.59 N
ATOM 20 N1 A B2077 -10.335 -20.147 83.836 1.00 60.91 N
ATOM 21 C2 A B2077 -11.246 -20.209 84.815 1.00 61.19 C
ATOM 22 N3 A B2077 -11.975 -21.244 85.214 1.00 61.44 N
ATOM 23 C4 A B2077 -11.709 -22.328 84.466 1.00 61.38 C
ATOM 24 P A B2078 -17.552 -25.318 83.372 1.00 57.50 P
ATOM 25 OP1 A B2078 -18.781 -25.945 83.835 1.00 57.90 O
ATOM 26 OP2 A B2078 -16.828 -25.936 82.249 1.00 57.30 O
ATOM 27 O5' A B2078 -17.811 -23.780 83.095 1.00 57.44 O
TER
ATOM 2 P U A2076 -14.922 -29.987 77.142 1.00 81.65 P
ATOM 3 OP1 U A2076 -13.849 -30.924 77.581 1.00 81.50 O
ATOM 4 OP2 U A2076 -16.339 -30.403 77.284 1.00 82.05 O
ATOM 5 O5' U A2076 -14.712 -28.565 77.835 1.00 81.47 O
ATOM 6 C5' U A2076 -13.516 -27.812 77.645 1.00 81.10 C
ATOM 7 C4' U A2076 -13.529 -26.545 78.464 1.00 81.01 C
ATOM 8 O4' U A2076 -14.566 -25.664 77.980 1.00 81.17 O
ATOM 9 C3' U A2076 -13.856 -26.704 79.942 1.00 81.16 C
ATOM 10 O3' U A2076 -12.753 -27.174 80.719 1.00 80.98 O
ATOM 11 C2' U A2076 -14.330 -25.307 80.316 1.00 81.18 C
ATOM 12 O2' U A2076 -13.229 -24.426 80.475 1.00 80.85 O
ATOM 13 C1' U A2076 -15.077 -24.900 79.051 1.00 81.27 C
ATOM 14 N1 U A2076 -16.540 -25.126 79.157 1.00 81.66 N
ATOM 15 C2 U A2076 -17.305 -24.164 79.815 1.00 81.81 C
ATOM 16 O2 U A2076 -16.835 -23.157 80.306 1.00 81.65 O
ATOM 17 N3 U A2076 -18.660 -24.411 79.887 1.00 82.19 N
ATOM 18 C4 U A2076 -19.334 -25.491 79.363 1.00 82.43 C
ATOM 19 O4 U A2076 -20.557 -25.561 79.495 1.00 82.77 O
ATOM 20 C5 U A2076 -18.485 -26.438 78.695 1.00 82.26 C
ATOM 21 C6 U A2076 -17.158 -26.231 78.617 1.00 81.89 C
ATOM 22 P A A2077 -13.005 -28.054 82.053 1.00 61.97 P
ATOM 23 OP1 A A2077 -11.666 -28.584 82.488 1.00 61.74 O
ATOM 24 OP2 A A2077 -14.116 -29.005 81.750 1.00 62.31 O
ATOM 25 O5' A A2077 -13.523 -26.976 83.094 1.00 62.05 O
TER
ATOM 1 O3' U B2076 -12.753 -27.174 80.719 1.00 80.98 O
ATOM 2 P A B2077 -13.005 -28.054 82.053 1.00 61.97 P
ATOM 3 OP1 A B2077 -11.666 -28.584 82.488 1.00 61.74 O
ATOM 4 OP2 A B2077 -14.116 -29.005 81.750 1.00 62.31 O
ATOM 5 O5' A B2077 -13.523 -26.976 83.094 1.00 62.05 O
ATOM 6 C5' A B2077 -14.118 -27.358 84.320 1.00 62.31 C
ATOM 7 C4' A B2077 -14.370 -26.147 85.168 1.00 62.33 C
ATOM 8 O4' A B2077 -13.107 -25.517 85.487 1.00 62.01 O
ATOM 9 C3' A B2077 -15.182 -25.054 84.498 1.00 62.39 C
ATOM 10 O3' A B2077 -16.573 -25.274 84.641 1.00 62.76 O
ATOM 11 C2' A B2077 -14.699 -23.785 85.186 1.00 62.23 C
ATOM 12 O2' A B2077 -15.391 -23.597 86.412 1.00 62.49 O
ATOM 13 C1' A B2077 -13.243 -24.126 85.507 1.00 61.94 C
ATOM 14 N9 A B2077 -12.279 -23.575 84.549 1.00 61.60 N
ATOM 15 C8 A B2077 -11.657 -24.309 83.594 1.00 61.44 C
ATOM 16 N7 A B2077 -10.784 -23.651 82.875 1.00 61.14 N
ATOM 17 C5 A B2077 -10.807 -22.395 83.420 1.00 61.11 C
ATOM 18 C6 A B2077 -10.091 -21.246 83.101 1.00 60.86 C
ATOM 19 N6 A B2077 -9.195 -21.168 82.121 1.00 60.59 N
ATOM 20 N1 A B2077 -10.335 -20.147 83.836 1.00 60.91 N
ATOM 21 C2 A B2077 -11.246 -20.209 84.815 1.00 61.19 C
ATOM 22 N3 A B2077 -11.975 -21.244 85.214 1.00 61.44 N
ATOM 23 C4 A B2077 -11.709 -22.328 84.466 1.00 61.38 C
ATOM 24 P A B2078 -17.552 -25.318 83.372 1.00 57.50 P
ATOM 25 OP1 A B2078 -18.781 -25.945 83.835 1.00 57.90 O
ATOM 26 OP2 A B2078 -16.828 -25.936 82.249 1.00 57.30 O
ATOM 27 O5' A B2078 -17.811 -23.780 83.095 1.00 57.44 O
TER
Atoms:
C4: (-19.334,-25.491,79.363)
N3: (-18.660,-24.411,79.887)
OP1: (-13.849,-30.924,77.581)
OP2: (-16.339,-30.403,77.284)
C2: (-17.305,-24.164,79.815)
C1': (-15.077,-24.900,79.051)
C3': (-13.856,-26.704,79.942)
O5': (-14.712,-28.565,77.835)
O4': (-14.566,-25.664,77.980)
C5': (-13.516,-27.812,77.645)
P: (-14.922,-29.987,77.142)
C4': (-13.529,-26.545,78.464)
C2': (-14.330,-25.307,80.316)
O2': (-13.229,-24.426,80.475)
N1: (-16.540,-25.126,79.157)
O4: (-20.557,-25.561,79.495)
O2: (-16.835,-23.157,80.306)
C6: (-17.158,-26.231,78.617)
C5: (-18.485,-26.438,78.695)
O3': (-12.753,-27.174,80.719)
N3: (-18.660,-24.411,79.887)
OP1: (-13.849,-30.924,77.581)
OP2: (-16.339,-30.403,77.284)
C2: (-17.305,-24.164,79.815)
C1': (-15.077,-24.900,79.051)
C3': (-13.856,-26.704,79.942)
O5': (-14.712,-28.565,77.835)
O4': (-14.566,-25.664,77.980)
C5': (-13.516,-27.812,77.645)
P: (-14.922,-29.987,77.142)
C4': (-13.529,-26.545,78.464)
C2': (-14.330,-25.307,80.316)
O2': (-13.229,-24.426,80.475)
N1: (-16.540,-25.126,79.157)
O4: (-20.557,-25.561,79.495)
O2: (-16.835,-23.157,80.306)
C6: (-17.158,-26.231,78.617)
C5: (-18.485,-26.438,78.695)
O3': (-12.753,-27.174,80.719)
OP1: (-11.666,-28.584,82.488)
OP2: (-14.116,-29.005,81.750)
C3': (-15.182,-25.054,84.498)
C1': (-13.243,-24.126,85.507)
C5': (-14.118,-27.358,84.320)
O4': (-13.107,-25.517,85.487)
C8: (-11.657,-24.309,83.594)
O2': (-15.391,-23.597,86.412)
C6: (-10.091,-21.246,83.101)
C5: (-10.807,-22.395,83.420)
C4: (-11.709,-22.328,84.466)
P: (-13.005,-28.054,82.053)
C4': (-14.370,-26.147,85.168)
C2': (-14.699,-23.785,85.186)
C2: (-11.246,-20.209,84.815)
N1: (-10.335,-20.147,83.836)
N3: (-11.975,-21.244,85.214)
N6: (-9.195,-21.168,82.121)
N7: (-10.784,-23.651,82.875)
N9: (-12.279,-23.575,84.549)
O5': (-13.523,-26.976,83.094)
O3': (-16.573,-25.274,84.641)
OP2: (-14.116,-29.005,81.750)
C3': (-15.182,-25.054,84.498)
C1': (-13.243,-24.126,85.507)
C5': (-14.118,-27.358,84.320)
O4': (-13.107,-25.517,85.487)
C8: (-11.657,-24.309,83.594)
O2': (-15.391,-23.597,86.412)
C6: (-10.091,-21.246,83.101)
C5: (-10.807,-22.395,83.420)
C4: (-11.709,-22.328,84.466)
P: (-13.005,-28.054,82.053)
C4': (-14.370,-26.147,85.168)
C2': (-14.699,-23.785,85.186)
C2: (-11.246,-20.209,84.815)
N1: (-10.335,-20.147,83.836)
N3: (-11.975,-21.244,85.214)
N6: (-9.195,-21.168,82.121)
N7: (-10.784,-23.651,82.875)
N9: (-12.279,-23.575,84.549)
O5': (-13.523,-26.976,83.094)
O3': (-16.573,-25.274,84.641)
Image (generated by PyMOL):