Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1277:1278
Extra
PDB:
ATOM 1 O3' U A 276 43.084 -34.255 104.320 1.00 38.62 O
ATOM 2 P U A 277 43.685 -34.830 102.991 1.00 43.30 P
ATOM 3 OP1 U A 277 44.814 -33.961 102.615 1.00 43.14 O
ATOM 4 OP2 U A 277 42.571 -34.996 102.057 1.00 43.07 O
ATOM 5 O5' U A 277 44.221 -36.249 103.437 1.00 43.65 O
ATOM 6 C5' U A 277 45.436 -36.391 104.130 1.00 43.90 C
ATOM 7 C4' U A 277 45.773 -37.833 104.274 1.00 44.19 C
ATOM 8 O4' U A 277 44.703 -38.493 104.995 1.00 44.42 O
ATOM 9 C3' U A 277 45.873 -38.615 102.975 1.00 44.02 C
ATOM 10 O3' U A 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 11 C2' U A 277 45.580 -40.028 103.426 1.00 44.37 C
ATOM 12 O2' U A 277 46.710 -40.553 104.076 1.00 44.68 O
ATOM 13 C1' U A 277 44.515 -39.796 104.484 1.00 44.52 C
ATOM 14 N1 U A 277 43.148 -39.912 103.944 1.00 44.35 N
ATOM 15 C2 U A 277 42.650 -41.166 103.819 1.00 44.54 C
ATOM 16 O2 U A 277 43.319 -42.110 104.107 1.00 44.81 O
ATOM 17 N3 U A 277 41.366 -41.241 103.333 1.00 44.39 N
ATOM 18 C4 U A 277 40.561 -40.132 102.979 1.00 44.08 C
ATOM 19 O4 U A 277 39.402 -40.289 102.557 1.00 43.98 O
ATOM 20 C5 U A 277 41.147 -38.838 103.152 1.00 43.90 C
ATOM 21 C6 U A 277 42.391 -38.808 103.615 1.00 44.05 C
ATOM 22 P G A 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 23 OP1 G A 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 24 OP2 G A 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 25 O5' G A 278 46.969 -39.797 100.254 1.00 42.24 O
TER
ATOM 1 O3' U B 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 2 P G B 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 3 OP1 G B 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 4 OP2 G B 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 5 O5' G B 278 46.969 -39.797 100.254 1.00 42.24 O
ATOM 6 C5' G B 278 46.948 -40.054 98.867 1.00 41.99 C
ATOM 7 C4' G B 278 46.978 -41.518 98.615 1.00 42.22 C
ATOM 8 O4' G B 278 48.301 -42.025 98.937 1.00 42.47 O
ATOM 9 C3' G B 278 46.068 -42.297 99.501 1.00 42.51 C
ATOM 10 O3' G B 278 44.757 -42.309 99.007 1.00 42.35 O
ATOM 11 C2' G B 278 46.737 -43.666 99.563 1.00 42.84 C
ATOM 12 O2' G B 278 46.468 -44.374 98.392 1.00 42.74 O
ATOM 13 C1' G B 278 48.203 -43.304 99.527 1.00 42.84 C
ATOM 14 N9 G B 278 48.854 -43.269 100.852 1.00 43.16 N
ATOM 15 C8 G B 278 49.422 -42.160 101.417 1.00 43.10 C
ATOM 16 N7 G B 278 50.012 -42.330 102.576 1.00 43.43 N
ATOM 17 C5 G B 278 49.875 -43.697 102.771 1.00 43.75 C
ATOM 18 C6 G B 278 50.326 -44.538 103.842 1.00 44.21 C
ATOM 19 O6 G B 278 50.956 -44.192 104.846 1.00 44.43 O
ATOM 20 N1 G B 278 49.934 -45.873 103.687 1.00 44.44 N
ATOM 21 C2 G B 278 49.215 -46.284 102.591 1.00 44.22 C
ATOM 22 N2 G B 278 48.870 -47.568 102.491 1.00 44.47 N
ATOM 23 N3 G B 278 48.840 -45.520 101.586 1.00 43.80 N
ATOM 24 C4 G B 278 49.179 -44.256 101.715 1.00 43.58 C
ATOM 25 P G B 279 43.505 -42.356 100.014 1.00 39.19 P
ATOM 26 OP1 G B 279 42.357 -42.740 99.225 1.00 39.06 O
ATOM 27 OP2 G B 279 43.463 -41.089 100.790 1.00 39.10 O
ATOM 28 O5' G B 279 43.897 -43.542 100.936 1.00 39.64 O
TER
ATOM 2 P U A 277 43.685 -34.830 102.991 1.00 43.30 P
ATOM 3 OP1 U A 277 44.814 -33.961 102.615 1.00 43.14 O
ATOM 4 OP2 U A 277 42.571 -34.996 102.057 1.00 43.07 O
ATOM 5 O5' U A 277 44.221 -36.249 103.437 1.00 43.65 O
ATOM 6 C5' U A 277 45.436 -36.391 104.130 1.00 43.90 C
ATOM 7 C4' U A 277 45.773 -37.833 104.274 1.00 44.19 C
ATOM 8 O4' U A 277 44.703 -38.493 104.995 1.00 44.42 O
ATOM 9 C3' U A 277 45.873 -38.615 102.975 1.00 44.02 C
ATOM 10 O3' U A 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 11 C2' U A 277 45.580 -40.028 103.426 1.00 44.37 C
ATOM 12 O2' U A 277 46.710 -40.553 104.076 1.00 44.68 O
ATOM 13 C1' U A 277 44.515 -39.796 104.484 1.00 44.52 C
ATOM 14 N1 U A 277 43.148 -39.912 103.944 1.00 44.35 N
ATOM 15 C2 U A 277 42.650 -41.166 103.819 1.00 44.54 C
ATOM 16 O2 U A 277 43.319 -42.110 104.107 1.00 44.81 O
ATOM 17 N3 U A 277 41.366 -41.241 103.333 1.00 44.39 N
ATOM 18 C4 U A 277 40.561 -40.132 102.979 1.00 44.08 C
ATOM 19 O4 U A 277 39.402 -40.289 102.557 1.00 43.98 O
ATOM 20 C5 U A 277 41.147 -38.838 103.152 1.00 43.90 C
ATOM 21 C6 U A 277 42.391 -38.808 103.615 1.00 44.05 C
ATOM 22 P G A 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 23 OP1 G A 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 24 OP2 G A 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 25 O5' G A 278 46.969 -39.797 100.254 1.00 42.24 O
TER
ATOM 1 O3' U B 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 2 P G B 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 3 OP1 G B 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 4 OP2 G B 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 5 O5' G B 278 46.969 -39.797 100.254 1.00 42.24 O
ATOM 6 C5' G B 278 46.948 -40.054 98.867 1.00 41.99 C
ATOM 7 C4' G B 278 46.978 -41.518 98.615 1.00 42.22 C
ATOM 8 O4' G B 278 48.301 -42.025 98.937 1.00 42.47 O
ATOM 9 C3' G B 278 46.068 -42.297 99.501 1.00 42.51 C
ATOM 10 O3' G B 278 44.757 -42.309 99.007 1.00 42.35 O
ATOM 11 C2' G B 278 46.737 -43.666 99.563 1.00 42.84 C
ATOM 12 O2' G B 278 46.468 -44.374 98.392 1.00 42.74 O
ATOM 13 C1' G B 278 48.203 -43.304 99.527 1.00 42.84 C
ATOM 14 N9 G B 278 48.854 -43.269 100.852 1.00 43.16 N
ATOM 15 C8 G B 278 49.422 -42.160 101.417 1.00 43.10 C
ATOM 16 N7 G B 278 50.012 -42.330 102.576 1.00 43.43 N
ATOM 17 C5 G B 278 49.875 -43.697 102.771 1.00 43.75 C
ATOM 18 C6 G B 278 50.326 -44.538 103.842 1.00 44.21 C
ATOM 19 O6 G B 278 50.956 -44.192 104.846 1.00 44.43 O
ATOM 20 N1 G B 278 49.934 -45.873 103.687 1.00 44.44 N
ATOM 21 C2 G B 278 49.215 -46.284 102.591 1.00 44.22 C
ATOM 22 N2 G B 278 48.870 -47.568 102.491 1.00 44.47 N
ATOM 23 N3 G B 278 48.840 -45.520 101.586 1.00 43.80 N
ATOM 24 C4 G B 278 49.179 -44.256 101.715 1.00 43.58 C
ATOM 25 P G B 279 43.505 -42.356 100.014 1.00 39.19 P
ATOM 26 OP1 G B 279 42.357 -42.740 99.225 1.00 39.06 O
ATOM 27 OP2 G B 279 43.463 -41.089 100.790 1.00 39.10 O
ATOM 28 O5' G B 279 43.897 -43.542 100.936 1.00 39.64 O
TER
Atoms:
C4: (40.561,-40.132,102.979)
N3: (41.366,-41.241,103.333)
OP1: (44.814,-33.961,102.615)
OP2: (42.571,-34.996,102.057)
C2: (42.650,-41.166,103.819)
C1': (44.515,-39.796,104.484)
C3': (45.873,-38.615,102.975)
O5': (44.221,-36.249,103.437)
O4': (44.703,-38.493,104.995)
C5': (45.436,-36.391,104.130)
P: (43.685,-34.830,102.991)
C4': (45.773,-37.833,104.274)
C2': (45.580,-40.028,103.426)
O2': (46.710,-40.553,104.076)
N1: (43.148,-39.912,103.944)
O4: (39.402,-40.289,102.557)
O2: (43.319,-42.110,104.107)
C6: (42.391,-38.808,103.615)
C5: (41.147,-38.838,103.152)
O3': (47.131,-38.490,102.361)
N3: (41.366,-41.241,103.333)
OP1: (44.814,-33.961,102.615)
OP2: (42.571,-34.996,102.057)
C2: (42.650,-41.166,103.819)
C1': (44.515,-39.796,104.484)
C3': (45.873,-38.615,102.975)
O5': (44.221,-36.249,103.437)
O4': (44.703,-38.493,104.995)
C5': (45.436,-36.391,104.130)
P: (43.685,-34.830,102.991)
C4': (45.773,-37.833,104.274)
C2': (45.580,-40.028,103.426)
O2': (46.710,-40.553,104.076)
N1: (43.148,-39.912,103.944)
O4: (39.402,-40.289,102.557)
O2: (43.319,-42.110,104.107)
C6: (42.391,-38.808,103.615)
C5: (41.147,-38.838,103.152)
O3': (47.131,-38.490,102.361)
OP1: (48.664,-38.011,100.483)
OP2: (46.208,-37.424,100.293)
C3': (46.068,-42.297,99.501)
C1': (48.203,-43.304,99.527)
C5': (46.948,-40.054,98.867)
O6: (50.956,-44.192,104.846)
O4': (48.301,-42.025,98.937)
C8: (49.422,-42.160,101.417)
C2: (49.215,-46.284,102.591)
C6: (50.326,-44.538,103.842)
C5: (49.875,-43.697,102.771)
C4: (49.179,-44.256,101.715)
P: (47.264,-38.356,100.768)
C4': (46.978,-41.518,98.615)
C2': (46.737,-43.666,99.563)
O2': (46.468,-44.374,98.392)
N1: (49.934,-45.873,103.687)
N2: (48.870,-47.568,102.491)
N3: (48.840,-45.520,101.586)
N7: (50.012,-42.330,102.576)
N9: (48.854,-43.269,100.852)
O5': (46.969,-39.797,100.254)
O3': (44.757,-42.309,99.007)
OP2: (46.208,-37.424,100.293)
C3': (46.068,-42.297,99.501)
C1': (48.203,-43.304,99.527)
C5': (46.948,-40.054,98.867)
O6: (50.956,-44.192,104.846)
O4': (48.301,-42.025,98.937)
C8: (49.422,-42.160,101.417)
C2: (49.215,-46.284,102.591)
C6: (50.326,-44.538,103.842)
C5: (49.875,-43.697,102.771)
C4: (49.179,-44.256,101.715)
P: (47.264,-38.356,100.768)
C4': (46.978,-41.518,98.615)
C2': (46.737,-43.666,99.563)
O2': (46.468,-44.374,98.392)
N1: (49.934,-45.873,103.687)
N2: (48.870,-47.568,102.491)
N3: (48.840,-45.520,101.586)
N7: (50.012,-42.330,102.576)
N9: (48.854,-43.269,100.852)
O5': (46.969,-39.797,100.254)
O3': (44.757,-42.309,99.007)
Image (generated by PyMOL):