Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2219:A2112
Extra
PDB:
ATOM 1 O3' A A2218 125.140 -43.218 -39.688 1.00 32.96 O
ATOM 2 P G A2219 124.938 -42.757 -41.197 1.00 50.45 P
ATOM 3 OP1 G A2219 123.612 -43.254 -41.637 1.00 43.58 O
ATOM 4 OP2 G A2219 126.140 -43.170 -41.953 1.00 39.69 O
ATOM 5 O5' G A2219 124.893 -41.185 -41.047 1.00 38.01 O
ATOM 6 C5' G A2219 123.930 -40.574 -40.221 1.00 38.53 C
ATOM 7 C4' G A2219 123.980 -39.095 -40.373 1.00 44.43 C
ATOM 8 O4' G A2219 124.934 -38.562 -39.442 1.00 51.33 O
ATOM 9 C3' G A2219 124.436 -38.605 -41.740 1.00 45.14 C
ATOM 10 O3' G A2219 123.357 -38.477 -42.639 1.00 49.93 O
ATOM 11 C2' G A2219 125.135 -37.286 -41.444 1.00 44.18 C
ATOM 12 O2' G A2219 124.196 -36.219 -41.401 1.00 51.40 O
ATOM 13 C1' G A2219 125.679 -37.525 -40.034 1.00 52.32 C
ATOM 14 N9 G A2219 127.106 -37.918 -40.031 1.00 49.09 N
ATOM 15 C8 G A2219 127.793 -38.812 -40.824 1.00 50.37 C
ATOM 16 N7 G A2219 129.068 -38.926 -40.522 1.00 43.94 N
ATOM 17 C5 G A2219 129.227 -38.058 -39.452 1.00 47.28 C
ATOM 18 C6 G A2219 130.384 -37.726 -38.702 1.00 47.56 C
ATOM 19 O6 G A2219 131.533 -38.160 -38.846 1.00 46.36 O
ATOM 20 N1 G A2219 130.087 -36.798 -37.703 1.00 46.52 N
ATOM 21 C2 G A2219 128.842 -36.260 -37.477 1.00 43.26 C
ATOM 22 N2 G A2219 128.734 -35.378 -36.486 1.00 47.34 N
ATOM 23 N3 G A2219 127.765 -36.538 -38.170 1.00 43.12 N
ATOM 24 C4 G A2219 128.031 -37.441 -39.134 1.00 47.08 C
ATOM 25 P U A2220 123.601 -38.457 -44.217 1.00 47.38 P
ATOM 26 OP1 U A2220 124.997 -38.886 -44.455 1.00 72.29 O
ATOM 27 OP2 U A2220 123.176 -37.129 -44.695 1.00 51.62 O
ATOM 28 O5' U A2220 122.610 -39.585 -44.724 1.00 37.76 O
TER
ATOM 1 O3' C B2111 125.478 -35.156 -35.438 1.00 32.03 O
ATOM 2 P G B2112 124.499 -33.953 -35.812 1.00 52.32 P
ATOM 3 OP1 G B2112 125.273 -33.020 -36.663 1.00 53.67 O
ATOM 4 OP2 G B2112 123.913 -33.448 -34.537 1.00 52.20 O
ATOM 5 O5' G B2112 123.364 -34.664 -36.674 1.00 48.14 O
ATOM 6 C5' G B2112 123.649 -35.227 -37.953 1.00 45.19 C
ATOM 7 C4' G B2112 122.390 -35.412 -38.761 1.00 49.72 C
ATOM 8 O4' G B2112 121.559 -36.438 -38.129 1.00 48.34 O
ATOM 9 C3' G B2112 121.511 -34.161 -38.871 1.00 58.92 C
ATOM 10 O3' G B2112 120.902 -34.097 -40.166 1.00 60.40 O
ATOM 11 C2' G B2112 120.444 -34.413 -37.816 1.00 51.86 C
ATOM 12 O2' G B2112 119.231 -33.714 -38.017 1.00 58.19 O
ATOM 13 C1' G B2112 120.264 -35.921 -37.934 1.00 44.35 C
ATOM 14 N9 G B2112 119.666 -36.530 -36.748 1.00 53.16 N
ATOM 15 C8 G B2112 119.775 -36.078 -35.454 1.00 49.94 C
ATOM 16 N7 G B2112 119.056 -36.758 -34.605 1.00 46.03 N
ATOM 17 C5 G B2112 118.402 -37.702 -35.394 1.00 46.89 C
ATOM 18 C6 G B2112 117.484 -38.721 -35.045 1.00 39.69 C
ATOM 19 O6 G B2112 117.035 -39.043 -33.947 1.00 45.85 O
ATOM 20 N1 G B2112 117.083 -39.431 -36.144 1.00 39.99 N
ATOM 21 C2 G B2112 117.486 -39.214 -37.421 1.00 45.61 C
ATOM 22 N2 G B2112 116.952 -40.037 -38.332 1.00 52.45 N
ATOM 23 N3 G B2112 118.334 -38.275 -37.774 1.00 51.15 N
ATOM 24 C4 G B2112 118.752 -37.559 -36.717 1.00 50.92 C
ATOM 25 P C B2113 121.438 -33.040 -41.246 1.00 54.09 P
ATOM 26 OP1 C B2113 121.222 -31.687 -40.666 1.00 55.44 O
ATOM 27 OP2 C B2113 120.806 -33.371 -42.546 1.00 69.24 O
ATOM 28 O5' C B2113 122.997 -33.384 -41.293 1.00 58.41 O
TER
ATOM 2 P G A2219 124.938 -42.757 -41.197 1.00 50.45 P
ATOM 3 OP1 G A2219 123.612 -43.254 -41.637 1.00 43.58 O
ATOM 4 OP2 G A2219 126.140 -43.170 -41.953 1.00 39.69 O
ATOM 5 O5' G A2219 124.893 -41.185 -41.047 1.00 38.01 O
ATOM 6 C5' G A2219 123.930 -40.574 -40.221 1.00 38.53 C
ATOM 7 C4' G A2219 123.980 -39.095 -40.373 1.00 44.43 C
ATOM 8 O4' G A2219 124.934 -38.562 -39.442 1.00 51.33 O
ATOM 9 C3' G A2219 124.436 -38.605 -41.740 1.00 45.14 C
ATOM 10 O3' G A2219 123.357 -38.477 -42.639 1.00 49.93 O
ATOM 11 C2' G A2219 125.135 -37.286 -41.444 1.00 44.18 C
ATOM 12 O2' G A2219 124.196 -36.219 -41.401 1.00 51.40 O
ATOM 13 C1' G A2219 125.679 -37.525 -40.034 1.00 52.32 C
ATOM 14 N9 G A2219 127.106 -37.918 -40.031 1.00 49.09 N
ATOM 15 C8 G A2219 127.793 -38.812 -40.824 1.00 50.37 C
ATOM 16 N7 G A2219 129.068 -38.926 -40.522 1.00 43.94 N
ATOM 17 C5 G A2219 129.227 -38.058 -39.452 1.00 47.28 C
ATOM 18 C6 G A2219 130.384 -37.726 -38.702 1.00 47.56 C
ATOM 19 O6 G A2219 131.533 -38.160 -38.846 1.00 46.36 O
ATOM 20 N1 G A2219 130.087 -36.798 -37.703 1.00 46.52 N
ATOM 21 C2 G A2219 128.842 -36.260 -37.477 1.00 43.26 C
ATOM 22 N2 G A2219 128.734 -35.378 -36.486 1.00 47.34 N
ATOM 23 N3 G A2219 127.765 -36.538 -38.170 1.00 43.12 N
ATOM 24 C4 G A2219 128.031 -37.441 -39.134 1.00 47.08 C
ATOM 25 P U A2220 123.601 -38.457 -44.217 1.00 47.38 P
ATOM 26 OP1 U A2220 124.997 -38.886 -44.455 1.00 72.29 O
ATOM 27 OP2 U A2220 123.176 -37.129 -44.695 1.00 51.62 O
ATOM 28 O5' U A2220 122.610 -39.585 -44.724 1.00 37.76 O
TER
ATOM 1 O3' C B2111 125.478 -35.156 -35.438 1.00 32.03 O
ATOM 2 P G B2112 124.499 -33.953 -35.812 1.00 52.32 P
ATOM 3 OP1 G B2112 125.273 -33.020 -36.663 1.00 53.67 O
ATOM 4 OP2 G B2112 123.913 -33.448 -34.537 1.00 52.20 O
ATOM 5 O5' G B2112 123.364 -34.664 -36.674 1.00 48.14 O
ATOM 6 C5' G B2112 123.649 -35.227 -37.953 1.00 45.19 C
ATOM 7 C4' G B2112 122.390 -35.412 -38.761 1.00 49.72 C
ATOM 8 O4' G B2112 121.559 -36.438 -38.129 1.00 48.34 O
ATOM 9 C3' G B2112 121.511 -34.161 -38.871 1.00 58.92 C
ATOM 10 O3' G B2112 120.902 -34.097 -40.166 1.00 60.40 O
ATOM 11 C2' G B2112 120.444 -34.413 -37.816 1.00 51.86 C
ATOM 12 O2' G B2112 119.231 -33.714 -38.017 1.00 58.19 O
ATOM 13 C1' G B2112 120.264 -35.921 -37.934 1.00 44.35 C
ATOM 14 N9 G B2112 119.666 -36.530 -36.748 1.00 53.16 N
ATOM 15 C8 G B2112 119.775 -36.078 -35.454 1.00 49.94 C
ATOM 16 N7 G B2112 119.056 -36.758 -34.605 1.00 46.03 N
ATOM 17 C5 G B2112 118.402 -37.702 -35.394 1.00 46.89 C
ATOM 18 C6 G B2112 117.484 -38.721 -35.045 1.00 39.69 C
ATOM 19 O6 G B2112 117.035 -39.043 -33.947 1.00 45.85 O
ATOM 20 N1 G B2112 117.083 -39.431 -36.144 1.00 39.99 N
ATOM 21 C2 G B2112 117.486 -39.214 -37.421 1.00 45.61 C
ATOM 22 N2 G B2112 116.952 -40.037 -38.332 1.00 52.45 N
ATOM 23 N3 G B2112 118.334 -38.275 -37.774 1.00 51.15 N
ATOM 24 C4 G B2112 118.752 -37.559 -36.717 1.00 50.92 C
ATOM 25 P C B2113 121.438 -33.040 -41.246 1.00 54.09 P
ATOM 26 OP1 C B2113 121.222 -31.687 -40.666 1.00 55.44 O
ATOM 27 OP2 C B2113 120.806 -33.371 -42.546 1.00 69.24 O
ATOM 28 O5' C B2113 122.997 -33.384 -41.293 1.00 58.41 O
TER
Atoms:
OP1: (123.612,-43.254,-41.637)
OP2: (126.140,-43.170,-41.953)
C3': (124.436,-38.605,-41.740)
C1': (125.679,-37.525,-40.034)
C5': (123.930,-40.574,-40.221)
O6: (131.533,-38.160,-38.846)
O4': (124.934,-38.562,-39.442)
C8: (127.793,-38.812,-40.824)
C2: (128.842,-36.260,-37.477)
C6: (130.384,-37.726,-38.702)
C5: (129.227,-38.058,-39.452)
C4: (128.031,-37.441,-39.134)
P: (124.938,-42.757,-41.197)
C4': (123.980,-39.095,-40.373)
C2': (125.135,-37.286,-41.444)
O2': (124.196,-36.219,-41.401)
N1: (130.087,-36.798,-37.703)
N2: (128.734,-35.378,-36.486)
N3: (127.765,-36.538,-38.170)
N7: (129.068,-38.926,-40.522)
N9: (127.106,-37.918,-40.031)
O5': (124.893,-41.185,-41.047)
O3': (123.357,-38.477,-42.639)
OP2: (126.140,-43.170,-41.953)
C3': (124.436,-38.605,-41.740)
C1': (125.679,-37.525,-40.034)
C5': (123.930,-40.574,-40.221)
O6: (131.533,-38.160,-38.846)
O4': (124.934,-38.562,-39.442)
C8: (127.793,-38.812,-40.824)
C2: (128.842,-36.260,-37.477)
C6: (130.384,-37.726,-38.702)
C5: (129.227,-38.058,-39.452)
C4: (128.031,-37.441,-39.134)
P: (124.938,-42.757,-41.197)
C4': (123.980,-39.095,-40.373)
C2': (125.135,-37.286,-41.444)
O2': (124.196,-36.219,-41.401)
N1: (130.087,-36.798,-37.703)
N2: (128.734,-35.378,-36.486)
N3: (127.765,-36.538,-38.170)
N7: (129.068,-38.926,-40.522)
N9: (127.106,-37.918,-40.031)
O5': (124.893,-41.185,-41.047)
O3': (123.357,-38.477,-42.639)
OP1: (125.273,-33.020,-36.663)
OP2: (123.913,-33.448,-34.537)
C3': (121.511,-34.161,-38.871)
C1': (120.264,-35.921,-37.934)
C5': (123.649,-35.227,-37.953)
O6: (117.035,-39.043,-33.947)
O4': (121.559,-36.438,-38.129)
C8: (119.775,-36.078,-35.454)
C2: (117.486,-39.214,-37.421)
C6: (117.484,-38.721,-35.045)
C5: (118.402,-37.702,-35.394)
C4: (118.752,-37.559,-36.717)
P: (124.499,-33.953,-35.812)
C4': (122.390,-35.412,-38.761)
C2': (120.444,-34.413,-37.816)
O2': (119.231,-33.714,-38.017)
N1: (117.083,-39.431,-36.144)
N2: (116.952,-40.037,-38.332)
N3: (118.334,-38.275,-37.774)
N7: (119.056,-36.758,-34.605)
N9: (119.666,-36.530,-36.748)
O5': (123.364,-34.664,-36.674)
O3': (120.902,-34.097,-40.166)
OP2: (123.913,-33.448,-34.537)
C3': (121.511,-34.161,-38.871)
C1': (120.264,-35.921,-37.934)
C5': (123.649,-35.227,-37.953)
O6: (117.035,-39.043,-33.947)
O4': (121.559,-36.438,-38.129)
C8: (119.775,-36.078,-35.454)
C2: (117.486,-39.214,-37.421)
C6: (117.484,-38.721,-35.045)
C5: (118.402,-37.702,-35.394)
C4: (118.752,-37.559,-36.717)
P: (124.499,-33.953,-35.812)
C4': (122.390,-35.412,-38.761)
C2': (120.444,-34.413,-37.816)
O2': (119.231,-33.714,-38.017)
N1: (117.083,-39.431,-36.144)
N2: (116.952,-40.037,-38.332)
N3: (118.334,-38.275,-37.774)
N7: (119.056,-36.758,-34.605)
N9: (119.666,-36.530,-36.748)
O5': (123.364,-34.664,-36.674)
O3': (120.902,-34.097,-40.166)
Image (generated by PyMOL):