ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A495:A508

Extra

PDB:
ATOM 1 O3' U A 494 -120.715 17.143 -40.973 1.00 22.70 O
ATOM 2 P G A 495 -121.649 17.104 -39.667 1.00 33.60 P
ATOM 3 OP1 G A 495 -121.745 15.679 -39.270 1.00 36.42 O
ATOM 4 OP2 G A 495 -122.897 17.869 -39.934 1.00 36.68 O
ATOM 5 O5' G A 495 -120.786 17.866 -38.565 1.00 48.11 O
ATOM 6 C5' G A 495 -119.461 17.410 -38.240 1.00 46.88 C
ATOM 7 C4' G A 495 -118.746 18.438 -37.405 1.00 46.20 C
ATOM 8 O4' G A 495 -118.902 19.707 -38.079 1.00 47.33 O
ATOM 9 C3' G A 495 -119.259 18.629 -35.978 1.00 45.32 C
ATOM 10 O3' G A 495 -118.148 18.971 -35.135 1.00 42.92 O
ATOM 11 C2' G A 495 -120.201 19.820 -36.108 1.00 46.64 C
ATOM 12 O2' G A 495 -120.273 20.579 -34.915 1.00 46.94 O
ATOM 13 C1' G A 495 -119.538 20.626 -37.225 1.00 47.79 C
ATOM 14 N9 G A 495 -120.467 21.412 -38.033 1.00 35.24 N
ATOM 15 C8 G A 495 -121.611 20.976 -38.655 1.00 36.27 C
ATOM 16 N7 G A 495 -122.232 21.923 -39.308 1.00 37.42 N
ATOM 17 C5 G A 495 -121.450 23.053 -39.108 1.00 37.47 C
ATOM 18 C6 G A 495 -121.618 24.385 -39.571 1.00 37.66 C
ATOM 19 O6 G A 495 -122.520 24.850 -40.277 1.00 37.83 O
ATOM 20 N1 G A 495 -120.592 25.210 -39.129 1.00 37.46 N
ATOM 21 C2 G A 495 -119.538 24.813 -38.340 1.00 37.70 C
ATOM 22 N2 G A 495 -118.648 25.759 -38.005 1.00 38.66 N
ATOM 23 N3 G A 495 -119.368 23.579 -37.906 1.00 36.88 N
ATOM 24 C4 G A 495 -120.356 22.756 -38.323 1.00 36.62 C
ATOM 25 P C A 496 -118.009 18.330 -33.655 1.00 16.73 P
ATOM 26 OP1 C A 496 -118.772 17.048 -33.608 1.00 34.89 O
ATOM 27 OP2 C A 496 -118.295 19.388 -32.633 1.00 34.30 O
ATOM 28 O5' C A 496 -116.458 17.992 -33.560 1.00 25.82 O
TER

ATOM 1 O3' G B 507 -114.875 24.868 -36.428 1.00 11.26 O
ATOM 2 P G B 508 -115.485 25.471 -35.090 1.00 49.01 P
ATOM 3 OP1 G B 508 -116.859 25.965 -35.384 1.00 25.53 O
ATOM 4 OP2 G B 508 -114.439 26.410 -34.569 1.00 24.84 O
ATOM 5 O5' G B 508 -115.618 24.219 -34.115 1.00 22.69 O
ATOM 6 C5' G B 508 -116.392 23.057 -34.487 1.00 26.99 C
ATOM 7 C4' G B 508 -117.254 22.589 -33.323 1.00 31.06 C
ATOM 8 O4' G B 508 -116.430 22.017 -32.266 1.00 32.17 O
ATOM 9 C3' G B 508 -118.111 23.664 -32.671 1.00 33.47 C
ATOM 10 O3' G B 508 -119.381 23.122 -32.349 1.00 36.59 O
ATOM 11 C2' G B 508 -117.334 24.013 -31.403 1.00 33.59 C
ATOM 12 O2' G B 508 -118.156 24.492 -30.364 1.00 34.41 O
ATOM 13 C1' G B 508 -116.694 22.671 -31.038 1.00 33.62 C
ATOM 14 N9 G B 508 -115.433 22.771 -30.302 1.00 29.20 N
ATOM 15 C8 G B 508 -114.480 23.758 -30.411 1.00 29.96 C
ATOM 16 N7 G B 508 -113.442 23.557 -29.647 1.00 31.20 N
ATOM 17 C5 G B 508 -113.726 22.368 -28.988 1.00 31.49 C
ATOM 18 C6 G B 508 -112.965 21.646 -28.048 1.00 32.66 C
ATOM 19 O6 G B 508 -111.842 21.916 -27.588 1.00 34.16 O
ATOM 20 N1 G B 508 -113.624 20.496 -27.639 1.00 32.04 N
ATOM 21 C2 G B 508 -114.857 20.090 -28.080 1.00 31.37 C
ATOM 22 N2 G B 508 -115.324 18.938 -27.568 1.00 30.41 N
ATOM 23 N3 G B 508 -115.576 20.757 -28.958 1.00 30.92 N
ATOM 24 C4 G B 508 -114.954 21.877 -29.370 1.00 30.39 C
ATOM 25 P U B 509 -120.685 24.051 -32.454 1.00 37.62 P
ATOM 26 OP1 U B 509 -120.269 25.436 -32.112 1.00 64.04 O
ATOM 27 OP2 U B 509 -121.786 23.408 -31.695 1.00 64.75 O
ATOM 28 O5' U B 509 -121.084 23.992 -33.991 1.00 29.90 O
TER

Atoms:
OP1: (-121.745,15.679,-39.270)
OP2: (-122.897,17.869,-39.934)
C3': (-119.259,18.629,-35.978)
C1': (-119.538,20.626,-37.225)
C5': (-119.461,17.410,-38.240)
O6: (-122.520,24.850,-40.277)
O4': (-118.902,19.707,-38.079)
C8: (-121.611,20.976,-38.655)
C2: (-119.538,24.813,-38.340)
C6: (-121.618,24.385,-39.571)
C5: (-121.450,23.053,-39.108)
C4: (-120.356,22.756,-38.323)
P: (-121.649,17.104,-39.667)
C4': (-118.746,18.438,-37.405)
C2': (-120.201,19.820,-36.108)
O2': (-120.273,20.579,-34.915)
N1: (-120.592,25.210,-39.129)
N2: (-118.648,25.759,-38.005)
N3: (-119.368,23.579,-37.906)
N7: (-122.232,21.923,-39.308)
N9: (-120.467,21.412,-38.033)
O5': (-120.786,17.866,-38.565)
O3': (-118.148,18.971,-35.135)
OP1: (-116.859,25.965,-35.384)
OP2: (-114.439,26.410,-34.569)
C3': (-118.111,23.664,-32.671)
C1': (-116.694,22.671,-31.038)
C5': (-116.392,23.057,-34.487)
O6: (-111.842,21.916,-27.588)
O4': (-116.430,22.017,-32.266)
C8: (-114.480,23.758,-30.411)
C2: (-114.857,20.090,-28.080)
C6: (-112.965,21.646,-28.048)
C5: (-113.726,22.368,-28.988)
C4: (-114.954,21.877,-29.370)
P: (-115.485,25.471,-35.090)
C4': (-117.254,22.589,-33.323)
C2': (-117.334,24.013,-31.403)
O2': (-118.156,24.492,-30.364)
N1: (-113.624,20.496,-27.639)
N2: (-115.324,18.938,-27.568)
N3: (-115.576,20.757,-28.958)
N7: (-113.442,23.557,-29.647)
N9: (-115.433,22.771,-30.302)
O5': (-115.618,24.219,-34.115)
O3': (-119.381,23.122,-32.349)
Image (generated by PyMOL):
PyMOL image
show in jmol