Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:6560:6573
Extra
PDB:
ATOM 1 O3' U A 559 230.129 4.685 281.730 1.00 67.59 O
ATOM 2 P G A 560 229.775 3.165 281.318 1.00 72.89 P
ATOM 3 OP1 G A 560 228.309 3.105 281.114 1.00 72.56 O
ATOM 4 OP2 G A 560 230.392 2.282 282.328 1.00 73.96 O
ATOM 5 O5' G A 560 230.513 2.985 279.932 1.00 72.14 O
ATOM 6 C5' G A 560 229.854 3.232 278.698 1.00 71.16 C
ATOM 7 C4' G A 560 230.759 2.897 277.543 1.00 70.69 C
ATOM 8 O4' G A 560 232.122 3.237 277.920 1.00 71.06 O
ATOM 9 C3' G A 560 230.791 1.414 277.160 1.00 70.93 C
ATOM 10 O3' G A 560 231.051 1.267 275.763 1.00 70.18 O
ATOM 11 C2' G A 560 231.979 0.883 277.935 1.00 71.78 C
ATOM 12 O2' G A 560 232.555 -0.263 277.364 1.00 71.91 O
ATOM 13 C1' G A 560 232.937 2.067 277.889 1.00 71.56 C
ATOM 14 N9 G A 560 233.884 2.119 279.021 1.00 72.44 N
ATOM 15 C8 G A 560 233.552 2.083 280.365 1.00 73.26 C
ATOM 16 N7 G A 560 234.587 2.159 281.176 1.00 74.00 N
ATOM 17 C5 G A 560 235.681 2.249 280.322 1.00 73.64 C
ATOM 18 C6 G A 560 237.057 2.356 280.626 1.00 74.14 C
ATOM 19 O6 G A 560 237.585 2.393 281.738 1.00 75.02 O
ATOM 20 N1 G A 560 237.855 2.436 279.494 1.00 73.58 N
ATOM 21 C2 G A 560 237.389 2.406 278.219 1.00 72.65 C
ATOM 22 N2 G A 560 238.331 2.477 277.279 1.00 72.30 N
ATOM 23 N3 G A 560 236.103 2.319 277.904 1.00 72.17 N
ATOM 24 C4 G A 560 235.286 2.232 278.993 1.00 72.69 C
ATOM 25 P C A 561 229.872 0.838 274.753 1.00 79.21 P
ATOM 26 OP1 C A 561 228.662 0.539 275.563 1.00 79.61 O
ATOM 27 OP2 C A 561 230.424 -0.226 273.870 1.00 79.16 O
ATOM 28 O5' C A 561 229.620 2.186 273.938 1.00 78.28 O
TER
ATOM 1 O3' G B 572 237.160 3.614 273.909 1.00 62.10 O
ATOM 2 P G B 573 237.500 2.100 273.504 1.00 95.33 P
ATOM 3 OP1 G B 573 238.213 1.520 274.625 1.00 96.31 O
ATOM 4 OP2 G B 573 238.150 2.118 272.187 1.00 94.79 O
ATOM 5 O5' G B 573 236.074 1.445 273.395 1.00 95.12 O
ATOM 6 C5' G B 573 235.147 1.549 274.463 1.00 95.47 C
ATOM 7 C4' G B 573 234.118 0.447 274.403 1.00 95.57 C
ATOM 8 O4' G B 573 233.376 0.531 273.145 1.00 94.69 O
ATOM 9 C3' G B 573 234.676 -0.965 274.384 1.00 96.14 C
ATOM 10 O3' G B 573 235.027 -1.463 275.646 1.00 97.11 O
ATOM 11 C2' G B 573 233.574 -1.741 273.687 1.00 95.79 C
ATOM 12 O2' G B 573 232.429 -1.851 274.527 1.00 96.09 O
ATOM 13 C1' G B 573 233.246 -0.762 272.582 1.00 94.79 C
ATOM 14 N9 G B 573 234.207 -0.873 271.469 1.00 94.44 N
ATOM 15 C8 G B 573 235.588 -0.829 271.489 1.00 94.73 C
ATOM 16 N7 G B 573 236.165 -0.947 270.332 1.00 94.32 N
ATOM 17 C5 G B 573 235.088 -1.064 269.481 1.00 93.70 C
ATOM 18 C6 G B 573 235.076 -1.224 268.076 1.00 93.09 C
ATOM 19 O6 G B 573 236.052 -1.283 267.305 1.00 92.98 O
ATOM 20 N1 G B 573 233.763 -1.316 267.593 1.00 92.63 N
ATOM 21 C2 G B 573 232.628 -1.260 268.384 1.00 92.76 C
ATOM 22 N2 G B 573 231.451 -1.374 267.758 1.00 92.31 N
ATOM 23 N3 G B 573 232.629 -1.104 269.704 1.00 93.33 N
ATOM 24 C4 G B 573 233.887 -1.016 270.164 1.00 93.77 C
ATOM 25 P U B 574 235.957 -2.750 275.727 1.00125.49 P
ATOM 26 OP1 U B 574 236.302 -3.128 274.331 1.00124.90 O
ATOM 27 OP2 U B 574 235.250 -3.731 276.579 1.00126.19 O
ATOM 28 O5' U B 574 237.249 -2.205 276.477 1.00126.04 O
TER
ATOM 2 P G A 560 229.775 3.165 281.318 1.00 72.89 P
ATOM 3 OP1 G A 560 228.309 3.105 281.114 1.00 72.56 O
ATOM 4 OP2 G A 560 230.392 2.282 282.328 1.00 73.96 O
ATOM 5 O5' G A 560 230.513 2.985 279.932 1.00 72.14 O
ATOM 6 C5' G A 560 229.854 3.232 278.698 1.00 71.16 C
ATOM 7 C4' G A 560 230.759 2.897 277.543 1.00 70.69 C
ATOM 8 O4' G A 560 232.122 3.237 277.920 1.00 71.06 O
ATOM 9 C3' G A 560 230.791 1.414 277.160 1.00 70.93 C
ATOM 10 O3' G A 560 231.051 1.267 275.763 1.00 70.18 O
ATOM 11 C2' G A 560 231.979 0.883 277.935 1.00 71.78 C
ATOM 12 O2' G A 560 232.555 -0.263 277.364 1.00 71.91 O
ATOM 13 C1' G A 560 232.937 2.067 277.889 1.00 71.56 C
ATOM 14 N9 G A 560 233.884 2.119 279.021 1.00 72.44 N
ATOM 15 C8 G A 560 233.552 2.083 280.365 1.00 73.26 C
ATOM 16 N7 G A 560 234.587 2.159 281.176 1.00 74.00 N
ATOM 17 C5 G A 560 235.681 2.249 280.322 1.00 73.64 C
ATOM 18 C6 G A 560 237.057 2.356 280.626 1.00 74.14 C
ATOM 19 O6 G A 560 237.585 2.393 281.738 1.00 75.02 O
ATOM 20 N1 G A 560 237.855 2.436 279.494 1.00 73.58 N
ATOM 21 C2 G A 560 237.389 2.406 278.219 1.00 72.65 C
ATOM 22 N2 G A 560 238.331 2.477 277.279 1.00 72.30 N
ATOM 23 N3 G A 560 236.103 2.319 277.904 1.00 72.17 N
ATOM 24 C4 G A 560 235.286 2.232 278.993 1.00 72.69 C
ATOM 25 P C A 561 229.872 0.838 274.753 1.00 79.21 P
ATOM 26 OP1 C A 561 228.662 0.539 275.563 1.00 79.61 O
ATOM 27 OP2 C A 561 230.424 -0.226 273.870 1.00 79.16 O
ATOM 28 O5' C A 561 229.620 2.186 273.938 1.00 78.28 O
TER
ATOM 1 O3' G B 572 237.160 3.614 273.909 1.00 62.10 O
ATOM 2 P G B 573 237.500 2.100 273.504 1.00 95.33 P
ATOM 3 OP1 G B 573 238.213 1.520 274.625 1.00 96.31 O
ATOM 4 OP2 G B 573 238.150 2.118 272.187 1.00 94.79 O
ATOM 5 O5' G B 573 236.074 1.445 273.395 1.00 95.12 O
ATOM 6 C5' G B 573 235.147 1.549 274.463 1.00 95.47 C
ATOM 7 C4' G B 573 234.118 0.447 274.403 1.00 95.57 C
ATOM 8 O4' G B 573 233.376 0.531 273.145 1.00 94.69 O
ATOM 9 C3' G B 573 234.676 -0.965 274.384 1.00 96.14 C
ATOM 10 O3' G B 573 235.027 -1.463 275.646 1.00 97.11 O
ATOM 11 C2' G B 573 233.574 -1.741 273.687 1.00 95.79 C
ATOM 12 O2' G B 573 232.429 -1.851 274.527 1.00 96.09 O
ATOM 13 C1' G B 573 233.246 -0.762 272.582 1.00 94.79 C
ATOM 14 N9 G B 573 234.207 -0.873 271.469 1.00 94.44 N
ATOM 15 C8 G B 573 235.588 -0.829 271.489 1.00 94.73 C
ATOM 16 N7 G B 573 236.165 -0.947 270.332 1.00 94.32 N
ATOM 17 C5 G B 573 235.088 -1.064 269.481 1.00 93.70 C
ATOM 18 C6 G B 573 235.076 -1.224 268.076 1.00 93.09 C
ATOM 19 O6 G B 573 236.052 -1.283 267.305 1.00 92.98 O
ATOM 20 N1 G B 573 233.763 -1.316 267.593 1.00 92.63 N
ATOM 21 C2 G B 573 232.628 -1.260 268.384 1.00 92.76 C
ATOM 22 N2 G B 573 231.451 -1.374 267.758 1.00 92.31 N
ATOM 23 N3 G B 573 232.629 -1.104 269.704 1.00 93.33 N
ATOM 24 C4 G B 573 233.887 -1.016 270.164 1.00 93.77 C
ATOM 25 P U B 574 235.957 -2.750 275.727 1.00125.49 P
ATOM 26 OP1 U B 574 236.302 -3.128 274.331 1.00124.90 O
ATOM 27 OP2 U B 574 235.250 -3.731 276.579 1.00126.19 O
ATOM 28 O5' U B 574 237.249 -2.205 276.477 1.00126.04 O
TER
Atoms:
OP1: (228.309,3.105,281.114)
OP2: (230.392,2.282,282.328)
C3': (230.791,1.414,277.160)
C1': (232.937,2.067,277.889)
C5': (229.854,3.232,278.698)
O6: (237.585,2.393,281.738)
O4': (232.122,3.237,277.920)
C8: (233.552,2.083,280.365)
C2: (237.389,2.406,278.219)
C6: (237.057,2.356,280.626)
C5: (235.681,2.249,280.322)
C4: (235.286,2.232,278.993)
P: (229.775,3.165,281.318)
C4': (230.759,2.897,277.543)
C2': (231.979,0.883,277.935)
O2': (232.555,-0.263,277.364)
N1: (237.855,2.436,279.494)
N2: (238.331,2.477,277.279)
N3: (236.103,2.319,277.904)
N7: (234.587,2.159,281.176)
N9: (233.884,2.119,279.021)
O5': (230.513,2.985,279.932)
O3': (231.051,1.267,275.763)
OP2: (230.392,2.282,282.328)
C3': (230.791,1.414,277.160)
C1': (232.937,2.067,277.889)
C5': (229.854,3.232,278.698)
O6: (237.585,2.393,281.738)
O4': (232.122,3.237,277.920)
C8: (233.552,2.083,280.365)
C2: (237.389,2.406,278.219)
C6: (237.057,2.356,280.626)
C5: (235.681,2.249,280.322)
C4: (235.286,2.232,278.993)
P: (229.775,3.165,281.318)
C4': (230.759,2.897,277.543)
C2': (231.979,0.883,277.935)
O2': (232.555,-0.263,277.364)
N1: (237.855,2.436,279.494)
N2: (238.331,2.477,277.279)
N3: (236.103,2.319,277.904)
N7: (234.587,2.159,281.176)
N9: (233.884,2.119,279.021)
O5': (230.513,2.985,279.932)
O3': (231.051,1.267,275.763)
OP1: (238.213,1.520,274.625)
OP2: (238.150,2.118,272.187)
C3': (234.676,-0.965,274.384)
C1': (233.246,-0.762,272.582)
C5': (235.147,1.549,274.463)
O6: (236.052,-1.283,267.305)
O4': (233.376,0.531,273.145)
C8: (235.588,-0.829,271.489)
C2: (232.628,-1.260,268.384)
C6: (235.076,-1.224,268.076)
C5: (235.088,-1.064,269.481)
C4: (233.887,-1.016,270.164)
P: (237.500,2.100,273.504)
C4': (234.118,0.447,274.403)
C2': (233.574,-1.741,273.687)
O2': (232.429,-1.851,274.527)
N1: (233.763,-1.316,267.593)
N2: (231.451,-1.374,267.758)
N3: (232.629,-1.104,269.704)
N7: (236.165,-0.947,270.332)
N9: (234.207,-0.873,271.469)
O5': (236.074,1.445,273.395)
O3': (235.027,-1.463,275.646)
OP2: (238.150,2.118,272.187)
C3': (234.676,-0.965,274.384)
C1': (233.246,-0.762,272.582)
C5': (235.147,1.549,274.463)
O6: (236.052,-1.283,267.305)
O4': (233.376,0.531,273.145)
C8: (235.588,-0.829,271.489)
C2: (232.628,-1.260,268.384)
C6: (235.076,-1.224,268.076)
C5: (235.088,-1.064,269.481)
C4: (233.887,-1.016,270.164)
P: (237.500,2.100,273.504)
C4': (234.118,0.447,274.403)
C2': (233.574,-1.741,273.687)
O2': (232.429,-1.851,274.527)
N1: (233.763,-1.316,267.593)
N2: (231.451,-1.374,267.758)
N3: (232.629,-1.104,269.704)
N7: (236.165,-0.947,270.332)
N9: (234.207,-0.873,271.469)
O5': (236.074,1.445,273.395)
O3': (235.027,-1.463,275.646)
Image (generated by PyMOL):