ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A519:A520

Extra

PDB:
ATOM 1 O3' A A 518 47.174-102.804 -30.501 1.00 41.95 O
ATOM 2 P G A 519 46.357-102.950 -29.151 1.00 46.61 P
ATOM 3 OP1 G A 519 46.842-101.891 -28.225 1.00 58.16 O
ATOM 4 OP2 G A 519 46.452-104.372 -28.740 1.00 55.96 O
ATOM 5 O5' G A 519 44.879-102.619 -29.621 1.00 38.92 O
ATOM 6 C5' G A 519 44.598-101.420 -30.320 1.00 31.56 C
ATOM 7 C4' G A 519 43.310-100.806 -29.856 1.00 40.26 C
ATOM 8 O4' G A 519 42.219-101.673 -30.237 1.00 43.86 O
ATOM 9 C3' G A 519 43.186-100.606 -28.351 1.00 40.28 C
ATOM 10 O3' G A 519 42.437 -99.425 -28.098 1.00 40.56 O
ATOM 11 C2' G A 519 42.379-101.815 -27.912 1.00 35.15 C
ATOM 12 O2' G A 519 41.656-101.620 -26.722 1.00 40.03 O
ATOM 13 C1' G A 519 41.454-102.005 -29.102 1.00 40.90 C
ATOM 14 N9 G A 519 40.964-103.371 -29.270 1.00 40.71 N
ATOM 15 C8 G A 519 41.379-104.478 -28.584 1.00 45.24 C
ATOM 16 N7 G A 519 40.753-105.555 -28.959 1.00 47.07 N
ATOM 17 C5 G A 519 39.883-105.125 -29.938 1.00 38.78 C
ATOM 18 C6 G A 519 38.955-105.859 -30.682 1.00 42.45 C
ATOM 19 O6 G A 519 38.738-107.068 -30.601 1.00 51.67 O
ATOM 20 N1 G A 519 38.263-105.054 -31.573 1.00 42.30 N
ATOM 21 C2 G A 519 38.459-103.710 -31.719 1.00 41.28 C
ATOM 22 N2 G A 519 37.701-103.107 -32.640 1.00 41.23 N
ATOM 23 N3 G A 519 39.325-103.007 -31.018 1.00 38.43 N
ATOM 24 C4 G A 519 39.994-103.783 -30.149 1.00 36.75 C
ATOM 25 P A A 520 43.033 -98.269 -27.150 1.00 45.09 P
ATOM 26 OP1 A A 520 44.495 -98.481 -27.069 1.00 49.45 O
ATOM 27 OP2 A A 520 42.243 -98.277 -25.880 1.00 38.45 O
ATOM 28 O5' A A 520 42.718 -96.952 -27.990 1.00 36.79 O
TER

ATOM 1 O3' G B 519 42.437 -99.425 -28.098 1.00 40.56 O
ATOM 2 P A B 520 43.033 -98.269 -27.150 1.00 45.09 P
ATOM 3 OP1 A B 520 44.495 -98.481 -27.069 1.00 49.45 O
ATOM 4 OP2 A B 520 42.243 -98.277 -25.880 1.00 38.45 O
ATOM 5 O5' A B 520 42.718 -96.952 -27.990 1.00 36.79 O
ATOM 6 C5' A B 520 43.599 -96.516 -29.015 1.00 44.34 C
ATOM 7 C4' A B 520 42.847 -95.991 -30.212 1.00 51.58 C
ATOM 8 O4' A B 520 42.251 -97.092 -30.927 1.00 43.86 O
ATOM 9 C3' A B 520 41.693 -95.037 -29.920 1.00 55.31 C
ATOM 10 O3' A B 520 42.128 -93.699 -29.820 1.00 67.04 O
ATOM 11 C2' A B 520 40.759 -95.250 -31.093 1.00 48.89 C
ATOM 12 O2' A B 520 41.152 -94.433 -32.179 1.00 59.89 O
ATOM 13 C1' A B 520 41.019 -96.710 -31.469 1.00 46.30 C
ATOM 14 N9 A B 520 39.985 -97.620 -30.953 1.00 46.52 N
ATOM 15 C8 A B 520 40.077 -98.453 -29.875 1.00 42.82 C
ATOM 16 N7 A B 520 38.990 -99.156 -29.658 1.00 44.52 N
ATOM 17 C5 A B 520 38.147 -98.756 -30.671 1.00 46.49 C
ATOM 18 C6 A B 520 36.857 -99.134 -31.003 1.00 41.80 C
ATOM 19 N6 A B 520 36.207-100.032 -30.287 1.00 47.35 N
ATOM 20 N1 A B 520 36.269 -98.568 -32.079 1.00 42.59 N
ATOM 21 C2 A B 520 36.951 -97.661 -32.777 1.00 44.64 C
ATOM 22 N3 A B 520 38.192 -97.224 -32.565 1.00 54.55 N
ATOM 23 C4 A B 520 38.738 -97.819 -31.483 1.00 51.77 C
ATOM 24 P G B 521 41.797 -92.846 -28.522 1.00 49.35 P
ATOM 25 OP1 G B 521 41.743 -93.787 -27.390 1.00 68.88 O
ATOM 26 OP2 G B 521 40.606 -92.054 -28.836 1.00 91.84 O
ATOM 27 O5' G B 521 43.068 -91.870 -28.389 1.00 93.79 O
TER

Atoms:
OP1: (46.842,-101.891,-28.225)
OP2: (46.452,-104.372,-28.740)
C3': (43.186,-100.606,-28.351)
C1': (41.454,-102.005,-29.102)
C5': (44.598,-101.420,-30.320)
O6: (38.738,-107.068,-30.601)
O4': (42.219,-101.673,-30.237)
C8: (41.379,-104.478,-28.584)
C2: (38.459,-103.710,-31.719)
C6: (38.955,-105.859,-30.682)
C5: (39.883,-105.125,-29.938)
C4: (39.994,-103.783,-30.149)
P: (46.357,-102.950,-29.151)
C4': (43.310,-100.806,-29.856)
C2': (42.379,-101.815,-27.912)
O2': (41.656,-101.620,-26.722)
N1: (38.263,-105.054,-31.573)
N2: (37.701,-103.107,-32.640)
N3: (39.325,-103.007,-31.018)
N7: (40.753,-105.555,-28.959)
N9: (40.964,-103.371,-29.270)
O5': (44.879,-102.619,-29.621)
O3': (42.437,-99.425,-28.098)
OP1: (44.495,-98.481,-27.069)
OP2: (42.243,-98.277,-25.880)
C3': (41.693,-95.037,-29.920)
C1': (41.019,-96.710,-31.469)
C5': (43.599,-96.516,-29.015)
O4': (42.251,-97.092,-30.927)
C8: (40.077,-98.453,-29.875)
O2': (41.152,-94.433,-32.179)
C6: (36.857,-99.134,-31.003)
C5: (38.147,-98.756,-30.671)
C4: (38.738,-97.819,-31.483)
P: (43.033,-98.269,-27.150)
C4': (42.847,-95.991,-30.212)
C2': (40.759,-95.250,-31.093)
C2: (36.951,-97.661,-32.777)
N1: (36.269,-98.568,-32.079)
N3: (38.192,-97.224,-32.565)
N6: (36.207,-100.032,-30.287)
N7: (38.990,-99.156,-29.658)
N9: (39.985,-97.620,-30.953)
O5': (42.718,-96.952,-27.990)
O3': (42.128,-93.699,-29.820)
Image (generated by PyMOL):
PyMOL image
show in jmol