ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OI1:A519:A520

Extra

PDB:
ATOM 1 O3' A A 518 217.167 -79.730 -98.450 1.00 54.80 O
ATOM 2 P G A 519 218.046 -81.074 -98.382 1.00 59.24 P
ATOM 3 OP1 G A 519 217.625 -81.924 -99.527 1.00 62.65 O
ATOM 4 OP2 G A 519 217.914 -81.617 -97.009 1.00 59.86 O
ATOM 5 O5' G A 519 219.531 -80.542 -98.628 1.00 50.21 O
ATOM 6 C5' G A 519 219.841 -79.725 -99.754 1.00 44.42 C
ATOM 7 C4' G A 519 221.050 -80.239-100.506 1.00 51.21 C
ATOM 8 O4' G A 519 222.252 -79.932 -99.755 1.00 48.60 O
ATOM 9 C3' G A 519 221.072 -81.751-100.727 1.00 51.97 C
ATOM 10 O3' G A 519 221.858 -82.062-101.891 1.00 55.56 O
ATOM 11 C2' G A 519 221.798 -82.243 -99.502 1.00 50.77 C
ATOM 12 O2' G A 519 222.360 -83.531 -99.657 1.00 61.27 O
ATOM 13 C1' G A 519 222.871 -81.144 -99.341 1.00 57.79 C
ATOM 14 N9 G A 519 223.335 -80.952 -97.963 1.00 58.55 N
ATOM 15 C8 G A 519 222.886 -81.529 -96.789 1.00 62.01 C
ATOM 16 N7 G A 519 223.520 -81.105 -95.723 1.00 65.15 N
ATOM 17 C5 G A 519 224.431 -80.190 -96.239 1.00 59.67 C
ATOM 18 C6 G A 519 225.389 -79.405 -95.580 1.00 58.62 C
ATOM 19 O6 G A 519 225.618 -79.372 -94.361 1.00 64.04 O
ATOM 20 N1 G A 519 226.095 -78.614 -96.479 1.00 56.42 N
ATOM 21 C2 G A 519 225.900 -78.578 -97.834 1.00 58.96 C
ATOM 22 N2 G A 519 226.669 -77.735 -98.541 1.00 60.97 N
ATOM 23 N3 G A 519 225.009 -79.315 -98.463 1.00 58.95 N
ATOM 24 C4 G A 519 224.325 -80.086 -97.605 1.00 55.22 C
ATOM 25 P A A 520 221.261 -83.040-103.045 1.00 76.03 P
ATOM 26 OP1 A A 520 219.774 -83.000-102.943 1.00 63.95 O
ATOM 27 OP2 A A 520 221.947 -84.368-102.909 1.00 49.05 O
ATOM 28 O5' A A 520 221.708 -82.298-104.379 1.00 48.75 O
TER

ATOM 1 O3' G B 519 221.858 -82.062-101.891 1.00 55.56 O
ATOM 2 P A B 520 221.261 -83.040-103.045 1.00 76.03 P
ATOM 3 OP1 A B 520 219.774 -83.000-102.943 1.00 63.95 O
ATOM 4 OP2 A B 520 221.947 -84.368-102.909 1.00 49.05 O
ATOM 5 O5' A B 520 221.708 -82.298-104.379 1.00 48.75 O
ATOM 6 C5' A B 520 220.772 -81.484-105.074 1.00 54.90 C
ATOM 7 C4' A B 520 221.393 -80.204-105.548 1.00 58.24 C
ATOM 8 O4' A B 520 221.839 -79.447-104.407 1.00 48.49 O
ATOM 9 C3' A B 520 222.630 -80.356-106.446 1.00 68.09 C
ATOM 10 O3' A B 520 222.301 -80.474-107.825 1.00 70.85 O
ATOM 11 C2' A B 520 223.443 -79.109-106.144 1.00 60.92 C
ATOM 12 O2' A B 520 223.004 -78.018-106.940 1.00 77.79 O
ATOM 13 C1' A B 520 223.081 -78.834-104.685 1.00 65.89 C
ATOM 14 N9 A B 520 224.097 -79.380-103.765 1.00 69.00 N
ATOM 15 C8 A B 520 224.001 -80.424-102.862 1.00 60.22 C
ATOM 16 N7 A B 520 225.117 -80.625-102.195 1.00 57.16 N
ATOM 17 C5 A B 520 225.988 -79.655-102.706 1.00 59.11 C
ATOM 18 C6 A B 520 227.320 -79.332-102.422 1.00 56.77 C
ATOM 19 N6 A B 520 228.040 -79.994-101.514 1.00 64.79 N
ATOM 20 N1 A B 520 227.885 -78.301-103.097 1.00 53.29 N
ATOM 21 C2 A B 520 227.159 -77.625-103.998 1.00 58.39 C
ATOM 22 N3 A B 520 225.895 -77.827-104.360 1.00 62.59 N
ATOM 23 C4 A B 520 225.373 -78.871-103.669 1.00 67.47 C
ATOM 24 P G B 521 222.448 -81.878-108.584 1.00 68.07 P
ATOM 25 OP1 G B 521 222.418 -82.947-107.548 1.00 73.96 O
ATOM 26 OP2 G B 521 223.638 -81.766-109.450 1.00 98.92 O
ATOM 27 O5' G B 521 221.117 -81.935-109.493 1.00105.63 O
TER

Atoms:
OP1: (217.625,-81.924,-99.527)
OP2: (217.914,-81.617,-97.009)
C3': (221.072,-81.751,-100.727)
C1': (222.871,-81.144,-99.341)
C5': (219.841,-79.725,-99.754)
O6: (225.618,-79.372,-94.361)
O4': (222.252,-79.932,-99.755)
C8: (222.886,-81.529,-96.789)
C2: (225.900,-78.578,-97.834)
C6: (225.389,-79.405,-95.580)
C5: (224.431,-80.190,-96.239)
C4: (224.325,-80.086,-97.605)
P: (218.046,-81.074,-98.382)
C4': (221.050,-80.239,-100.506)
C2': (221.798,-82.243,-99.502)
O2': (222.360,-83.531,-99.657)
N1: (226.095,-78.614,-96.479)
N2: (226.669,-77.735,-98.541)
N3: (225.009,-79.315,-98.463)
N7: (223.520,-81.105,-95.723)
N9: (223.335,-80.952,-97.963)
O5': (219.531,-80.542,-98.628)
O3': (221.858,-82.062,-101.891)
OP1: (219.774,-83.000,-102.943)
OP2: (221.947,-84.368,-102.909)
C3': (222.630,-80.356,-106.446)
C1': (223.081,-78.834,-104.685)
C5': (220.772,-81.484,-105.074)
O4': (221.839,-79.447,-104.407)
C8: (224.001,-80.424,-102.862)
O2': (223.004,-78.018,-106.940)
C6: (227.320,-79.332,-102.422)
C5: (225.988,-79.655,-102.706)
C4: (225.373,-78.871,-103.669)
P: (221.261,-83.040,-103.045)
C4': (221.393,-80.204,-105.548)
C2': (223.443,-79.109,-106.144)
C2: (227.159,-77.625,-103.998)
N1: (227.885,-78.301,-103.097)
N3: (225.895,-77.827,-104.360)
N6: (228.040,-79.994,-101.514)
N7: (225.117,-80.625,-102.195)
N9: (224.097,-79.380,-103.765)
O5': (221.708,-82.298,-104.379)
O3': (222.301,-80.474,-107.825)
Image (generated by PyMOL):
PyMOL image
show in jmol