ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:A14:A15

Extra

PDB:
ATOM 1 O3' U A 13 13.431 34.142 32.217 1.00 20.46 O
ATOM 2 P G A 14 14.792 34.659 31.564 1.00 21.12 P
ATOM 3 OP1 G A 14 15.805 34.200 32.548 1.00 23.27 O
ATOM 4 OP2 G A 14 14.681 36.103 31.262 1.00 17.31 O
ATOM 5 O5' G A 14 14.922 33.902 30.158 1.00 19.39 O
ATOM 6 C5' G A 14 15.069 32.492 29.994 1.00 20.68 C
ATOM 7 C4' G A 14 15.356 32.186 28.542 1.00 21.78 C
ATOM 8 O4' G A 14 14.212 32.642 27.767 1.00 20.38 O
ATOM 9 C3' G A 14 16.564 32.941 27.992 1.00 20.45 C
ATOM 10 O3' G A 14 17.137 32.213 26.912 1.00 21.12 O
ATOM 11 C2' G A 14 15.919 34.212 27.455 1.00 22.42 C
ATOM 12 O2' G A 14 16.661 34.910 26.472 1.00 21.97 O
ATOM 13 C1' G A 14 14.588 33.694 26.916 1.00 16.82 C
ATOM 14 N9 G A 14 13.583 34.758 26.914 1.00 18.71 N
ATOM 15 C8 G A 14 13.362 35.678 27.918 1.00 17.83 C
ATOM 16 N7 G A 14 12.438 36.548 27.613 1.00 19.14 N
ATOM 17 C5 G A 14 12.064 36.214 26.323 1.00 17.31 C
ATOM 18 C6 G A 14 11.112 36.816 25.469 1.00 18.00 C
ATOM 19 O6 G A 14 10.402 37.804 25.698 1.00 16.62 O
ATOM 20 N1 G A 14 11.031 36.141 24.249 1.00 16.08 N
ATOM 21 C2 G A 14 11.785 35.044 23.898 1.00 17.22 C
ATOM 22 N2 G A 14 11.588 34.531 22.673 1.00 15.77 N
ATOM 23 N3 G A 14 12.669 34.482 24.697 1.00 15.63 N
ATOM 24 C4 G A 14 12.763 35.116 25.873 1.00 16.34 C
ATOM 25 P A A 15 18.494 31.396 27.109 1.00 36.46 P
ATOM 26 OP1 A A 15 18.040 30.060 27.581 1.00 29.51 O
ATOM 27 OP2 A A 15 19.444 32.175 27.933 1.00 29.06 O
ATOM 28 O5' A A 15 19.003 31.359 25.584 1.00 24.23 O
TER

ATOM 1 O3' G B 14 17.137 32.213 26.912 1.00 21.12 O
ATOM 2 P A B 15 18.494 31.396 27.109 1.00 36.46 P
ATOM 3 OP1 A B 15 18.040 30.060 27.581 1.00 29.51 O
ATOM 4 OP2 A B 15 19.444 32.175 27.933 1.00 29.06 O
ATOM 5 O5' A B 15 19.003 31.359 25.584 1.00 24.23 O
ATOM 6 C5' A B 15 19.467 30.114 25.113 1.00 21.65 C
ATOM 7 C4' A B 15 19.257 29.959 23.634 1.00 21.12 C
ATOM 8 O4' A B 15 17.847 30.018 23.300 1.00 18.98 O
ATOM 9 C3' A B 15 19.887 31.018 22.752 1.00 17.16 C
ATOM 10 O3' A B 15 21.294 30.852 22.630 1.00 17.68 O
ATOM 11 C2' A B 15 19.135 30.759 21.456 1.00 17.21 C
ATOM 12 O2' A B 15 19.629 29.555 20.894 1.00 19.61 O
ATOM 13 C1' A B 15 17.714 30.514 21.984 1.00 18.66 C
ATOM 14 N9 A B 15 16.961 31.782 21.994 1.00 16.27 N
ATOM 15 C8 A B 15 16.684 32.655 23.026 1.00 18.93 C
ATOM 16 N7 A B 15 16.027 33.731 22.641 1.00 17.13 N
ATOM 17 C5 A B 15 15.870 33.548 21.265 1.00 16.51 C
ATOM 18 C6 A B 15 15.262 34.315 20.256 1.00 17.29 C
ATOM 19 N6 A B 15 14.663 35.473 20.510 1.00 15.21 N
ATOM 20 N1 A B 15 15.290 33.838 18.982 1.00 16.94 N
ATOM 21 C2 A B 15 15.903 32.675 18.746 1.00 17.41 C
ATOM 22 N3 A B 15 16.517 31.874 19.610 1.00 16.41 N
ATOM 23 C4 A B 15 16.457 32.369 20.858 1.00 16.99 C
ATOM 24 P G B 16 22.241 32.131 22.559 1.00 19.33 P
ATOM 25 OP1 G B 16 23.612 31.591 22.385 1.00 19.20 O
ATOM 26 OP2 G B 16 21.919 32.985 23.733 1.00 17.99 O
ATOM 27 O5' G B 16 21.718 32.899 21.274 1.00 16.57 O
TER

Atoms:
OP1: (15.805,34.200,32.548)
OP2: (14.681,36.103,31.262)
C3': (16.564,32.941,27.992)
C1': (14.588,33.694,26.916)
C5': (15.069,32.492,29.994)
O6: (10.402,37.804,25.698)
O4': (14.212,32.642,27.767)
C8: (13.362,35.678,27.918)
C2: (11.785,35.044,23.898)
C6: (11.112,36.816,25.469)
C5: (12.064,36.214,26.323)
C4: (12.763,35.116,25.873)
P: (14.792,34.659,31.564)
C4': (15.356,32.186,28.542)
C2': (15.919,34.212,27.455)
O2': (16.661,34.910,26.472)
N1: (11.031,36.141,24.249)
N2: (11.588,34.531,22.673)
N3: (12.669,34.482,24.697)
N7: (12.438,36.548,27.613)
N9: (13.583,34.758,26.914)
O5': (14.922,33.902,30.158)
O3': (17.137,32.213,26.912)
OP1: (18.040,30.060,27.581)
OP2: (19.444,32.175,27.933)
C3': (19.887,31.018,22.752)
C1': (17.714,30.514,21.984)
C5': (19.467,30.114,25.113)
O4': (17.847,30.018,23.300)
C8: (16.684,32.655,23.026)
O2': (19.629,29.555,20.894)
C6: (15.262,34.315,20.256)
C5: (15.870,33.548,21.265)
C4: (16.457,32.369,20.858)
P: (18.494,31.396,27.109)
C4': (19.257,29.959,23.634)
C2': (19.135,30.759,21.456)
C2: (15.903,32.675,18.746)
N1: (15.290,33.838,18.982)
N3: (16.517,31.874,19.610)
N6: (14.663,35.473,20.510)
N7: (16.027,33.731,22.641)
N9: (16.961,31.782,21.994)
O5': (19.003,31.359,25.584)
O3': (21.294,30.852,22.630)
Image (generated by PyMOL):
PyMOL image
show in jmol