ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A118:A185

Extra

PDB:
ATOM 1 O3' U A 117 108.169 74.367 -21.735 1.00 63.67 O
ATOM 2 P G A 118 106.745 74.224 -21.009 1.00 62.47 P
ATOM 3 OP1 G A 118 106.133 75.571 -20.821 1.00 61.52 O
ATOM 4 OP2 G A 118 106.968 73.358 -19.828 1.00 65.46 O
ATOM 5 O5' G A 118 105.908 73.451 -22.113 1.00 61.46 O
ATOM 6 C5' G A 118 106.494 72.336 -22.816 1.00 63.33 C
ATOM 7 C4' G A 118 106.453 72.590 -24.297 1.00 64.57 C
ATOM 8 O4' G A 118 105.073 72.758 -24.659 1.00 66.26 O
ATOM 9 C3' G A 118 107.142 73.878 -24.714 1.00 66.03 C
ATOM 10 O3' G A 118 108.565 73.652 -25.006 1.00 65.83 O
ATOM 11 C2' G A 118 106.277 74.460 -25.839 1.00 67.35 C
ATOM 12 O2' G A 118 106.779 74.392 -27.152 1.00 69.51 O
ATOM 13 C1' G A 118 104.973 73.667 -25.725 1.00 67.30 C
ATOM 14 N9 G A 118 103.773 74.473 -25.538 1.00 67.39 N
ATOM 15 C8 G A 118 103.468 75.271 -24.463 1.00 67.81 C
ATOM 16 N7 G A 118 102.323 75.884 -24.590 1.00 67.89 N
ATOM 17 C5 G A 118 101.844 75.466 -25.824 1.00 67.21 C
ATOM 18 C6 G A 118 100.655 75.809 -26.501 1.00 67.53 C
ATOM 19 O6 G A 118 99.766 76.590 -26.137 1.00 68.89 O
ATOM 20 N1 G A 118 100.549 75.148 -27.724 1.00 66.96 N
ATOM 21 C2 G A 118 101.475 74.269 -28.229 1.00 66.79 C
ATOM 22 N2 G A 118 101.184 73.716 -29.416 1.00 64.55 N
ATOM 23 N3 G A 118 102.603 73.951 -27.609 1.00 67.47 N
ATOM 24 C4 G A 118 102.720 74.585 -26.417 1.00 67.13 C
ATOM 25 P A A 119 109.019 72.728 -26.260 1.00 63.94 P
ATOM 26 OP1 A A 119 110.171 73.390 -26.875 1.00 63.39 O
ATOM 27 OP2 A A 119 107.878 72.366 -27.093 1.00 63.35 O
ATOM 28 O5' A A 119 109.530 71.389 -25.583 1.00 65.19 O
TER

ATOM 1 O3' U B 184 105.030 71.849 -30.933 1.00 73.08 O
ATOM 2 P G B 185 103.801 70.842 -30.724 1.00 73.84 P
ATOM 3 OP1 G B 185 104.120 69.557 -31.426 1.00 72.78 O
ATOM 4 OP2 G B 185 102.598 71.610 -31.099 1.00 75.98 O
ATOM 5 O5' G B 185 103.775 70.571 -29.149 1.00 73.33 O
ATOM 6 C5' G B 185 102.639 69.935 -28.533 1.00 72.33 C
ATOM 7 C4' G B 185 103.090 68.914 -27.515 1.00 71.56 C
ATOM 8 O4' G B 185 104.076 68.048 -28.134 1.00 71.37 O
ATOM 9 C3' G B 185 103.731 69.442 -26.228 1.00 71.50 C
ATOM 10 O3' G B 185 103.408 68.559 -25.167 1.00 71.97 O
ATOM 11 C2' G B 185 105.223 69.239 -26.481 1.00 71.27 C
ATOM 12 O2' G B 185 105.978 69.015 -25.309 1.00 71.04 O
ATOM 13 C1' G B 185 105.189 67.948 -27.279 1.00 71.19 C
ATOM 14 N9 G B 185 106.381 67.583 -28.037 1.00 70.69 N
ATOM 15 C8 G B 185 106.699 67.895 -29.338 1.00 71.75 C
ATOM 16 N7 G B 185 107.805 67.329 -29.743 1.00 71.43 N
ATOM 17 C5 G B 185 108.250 66.619 -28.636 1.00 70.20 C
ATOM 18 C6 G B 185 109.379 65.790 -28.475 1.00 69.99 C
ATOM 19 O6 G B 185 110.246 65.500 -29.308 1.00 71.36 O
ATOM 20 N1 G B 185 109.444 65.265 -27.188 1.00 68.80 N
ATOM 21 C2 G B 185 108.535 65.506 -26.188 1.00 67.34 C
ATOM 22 N2 G B 185 108.761 64.907 -25.016 1.00 66.49 N
ATOM 23 N3 G B 185 107.480 66.276 -26.328 1.00 67.53 N
ATOM 24 C4 G B 185 107.396 66.791 -27.570 1.00 69.69 C
ATOM 25 P G B 186 102.006 68.681 -24.398 1.00 73.00 P
ATOM 26 OP1 G B 186 102.282 68.072 -23.057 1.00 73.40 O
ATOM 27 OP2 G B 186 100.940 68.118 -25.266 1.00 72.53 O
ATOM 28 O5' G B 186 101.768 70.241 -24.204 1.00 73.44 O
TER

Atoms:
OP1: (106.133,75.571,-20.821)
OP2: (106.968,73.358,-19.828)
C3': (107.142,73.878,-24.714)
C1': (104.973,73.667,-25.725)
C5': (106.494,72.336,-22.816)
O6: (99.766,76.590,-26.137)
O4': (105.073,72.758,-24.659)
C8: (103.468,75.271,-24.463)
C2: (101.475,74.269,-28.229)
C6: (100.655,75.809,-26.501)
C5: (101.844,75.466,-25.824)
C4: (102.720,74.585,-26.417)
P: (106.745,74.224,-21.009)
C4': (106.453,72.590,-24.297)
C2': (106.277,74.460,-25.839)
O2': (106.779,74.392,-27.152)
N1: (100.549,75.148,-27.724)
N2: (101.184,73.716,-29.416)
N3: (102.603,73.951,-27.609)
N7: (102.323,75.884,-24.590)
N9: (103.773,74.473,-25.538)
O5': (105.908,73.451,-22.113)
O3': (108.565,73.652,-25.006)
OP1: (104.120,69.557,-31.426)
OP2: (102.598,71.610,-31.099)
C3': (103.731,69.442,-26.228)
C1': (105.189,67.948,-27.279)
C5': (102.639,69.935,-28.533)
O6: (110.246,65.500,-29.308)
O4': (104.076,68.048,-28.134)
C8: (106.699,67.895,-29.338)
C2: (108.535,65.506,-26.188)
C6: (109.379,65.790,-28.475)
C5: (108.250,66.619,-28.636)
C4: (107.396,66.791,-27.570)
P: (103.801,70.842,-30.724)
C4': (103.090,68.914,-27.515)
C2': (105.223,69.239,-26.481)
O2': (105.978,69.015,-25.309)
N1: (109.444,65.265,-27.188)
N2: (108.761,64.907,-25.016)
N3: (107.480,66.276,-26.328)
N7: (107.805,67.329,-29.743)
N9: (106.381,67.583,-28.037)
O5': (103.775,70.571,-29.149)
O3': (103.408,68.559,-25.167)
Image (generated by PyMOL):
PyMOL image
show in jmol