Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A505:A506
Extra
PDB:
ATOM 1 O3' A A 504 -36.730-101.639 27.395 1.00 0.01 O
ATOM 2 P G A 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 3 OP1 G A 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 4 OP2 G A 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 5 O5' G A 505 -34.511-101.122 26.483 1.00 0.01 O
ATOM 6 C5' G A 505 -34.371-100.088 27.430 1.00 0.01 C
ATOM 7 C4' G A 505 -33.215 -99.206 27.092 1.00 0.01 C
ATOM 8 O4' G A 505 -31.993 -99.854 27.518 1.00 0.01 O
ATOM 9 C3' G A 505 -33.036 -98.928 25.625 1.00 0.01 C
ATOM 10 O3' G A 505 -32.407 -97.669 25.493 1.00 0.01 O
ATOM 11 C2' G A 505 -32.082-100.034 25.204 1.00 0.01 C
ATOM 12 O2' G A 505 -31.355 -99.768 24.025 1.00 0.01 O
ATOM 13 C1' G A 505 -31.175-100.104 26.414 1.00 0.01 C
ATOM 14 N9 G A 505 -30.542-101.395 26.615 1.00 0.01 N
ATOM 15 C8 G A 505 -30.747-102.525 25.887 1.00 0.01 C
ATOM 16 N7 G A 505 -30.013-103.520 26.294 1.00 0.01 N
ATOM 17 C5 G A 505 -29.298-103.014 27.359 1.00 0.01 C
ATOM 18 C6 G A 505 -28.344-103.639 28.175 1.00 0.01 C
ATOM 19 O6 G A 505 -27.947-104.794 28.111 1.00 0.01 O
ATOM 20 N1 G A 505 -27.853-102.788 29.147 1.00 0.01 N
ATOM 21 C2 G A 505 -28.250-101.489 29.297 1.00 0.01 C
ATOM 22 N2 G A 505 -27.656-100.818 30.294 1.00 0.01 N
ATOM 23 N3 G A 505 -29.143-100.891 28.525 1.00 0.01 N
ATOM 24 C4 G A 505 -29.618-101.707 27.577 1.00 0.01 C
ATOM 25 P A A 506 -32.958 -96.598 24.447 1.00 0.01 P
ATOM 26 OP1 A A 506 -34.397 -96.877 24.251 1.00 0.01 O
ATOM 27 OP2 A A 506 -32.049 -96.645 23.272 1.00 0.01 O
ATOM 28 O5' A A 506 -32.773 -95.223 25.218 1.00 0.01 O
TER
ATOM 1 O3' G B 505 -32.407 -97.669 25.493 1.00 0.01 O
ATOM 2 P A B 506 -32.958 -96.598 24.447 1.00 0.01 P
ATOM 3 OP1 A B 506 -34.397 -96.877 24.251 1.00 0.01 O
ATOM 4 OP2 A B 506 -32.049 -96.645 23.272 1.00 0.01 O
ATOM 5 O5' A B 506 -32.773 -95.223 25.218 1.00 0.01 O
ATOM 6 C5' A B 506 -33.822 -94.668 25.997 1.00 0.01 C
ATOM 7 C4' A B 506 -33.364 -94.340 27.382 1.00 0.01 C
ATOM 8 O4' A B 506 -32.783 -95.509 27.962 1.00 0.01 O
ATOM 9 C3' A B 506 -32.267 -93.305 27.488 1.00 0.01 C
ATOM 10 O3' A B 506 -32.758 -91.979 27.432 1.00 0.01 O
ATOM 11 C2' A B 506 -31.610 -93.641 28.818 1.00 0.01 C
ATOM 12 O2' A B 506 -32.323 -93.063 29.903 1.00 0.01 O
ATOM 13 C1' A B 506 -31.776 -95.150 28.880 1.00 0.01 C
ATOM 14 N9 A B 506 -30.529 -95.869 28.542 1.00 0.01 N
ATOM 15 C8 A B 506 -30.332 -96.759 27.520 1.00 0.01 C
ATOM 16 N7 A B 506 -29.126 -97.256 27.465 1.00 0.01 N
ATOM 17 C5 A B 506 -28.483 -96.660 28.529 1.00 0.01 C
ATOM 18 C6 A B 506 -27.173 -96.788 28.983 1.00 0.01 C
ATOM 19 N6 A B 506 -26.275 -97.584 28.434 1.00 0.01 N
ATOM 20 N1 A B 506 -26.836 -96.070 30.057 1.00 0.01 N
ATOM 21 C2 A B 506 -27.768 -95.290 30.634 1.00 0.01 C
ATOM 22 N3 A B 506 -29.039 -95.086 30.303 1.00 0.01 N
ATOM 23 C4 A B 506 -29.335 -95.811 29.213 1.00 0.01 C
ATOM 24 P A B 507 -32.502 -91.067 26.132 1.00 15.07 P
ATOM 25 OP1 A B 507 -31.881 -91.921 25.080 1.00 15.07 O
ATOM 26 OP2 A B 507 -31.783 -89.870 26.597 1.00 15.07 O
ATOM 27 O5' A B 507 -33.969 -90.677 25.691 1.00 15.07 O
TER
ATOM 2 P G A 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 3 OP1 G A 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 4 OP2 G A 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 5 O5' G A 505 -34.511-101.122 26.483 1.00 0.01 O
ATOM 6 C5' G A 505 -34.371-100.088 27.430 1.00 0.01 C
ATOM 7 C4' G A 505 -33.215 -99.206 27.092 1.00 0.01 C
ATOM 8 O4' G A 505 -31.993 -99.854 27.518 1.00 0.01 O
ATOM 9 C3' G A 505 -33.036 -98.928 25.625 1.00 0.01 C
ATOM 10 O3' G A 505 -32.407 -97.669 25.493 1.00 0.01 O
ATOM 11 C2' G A 505 -32.082-100.034 25.204 1.00 0.01 C
ATOM 12 O2' G A 505 -31.355 -99.768 24.025 1.00 0.01 O
ATOM 13 C1' G A 505 -31.175-100.104 26.414 1.00 0.01 C
ATOM 14 N9 G A 505 -30.542-101.395 26.615 1.00 0.01 N
ATOM 15 C8 G A 505 -30.747-102.525 25.887 1.00 0.01 C
ATOM 16 N7 G A 505 -30.013-103.520 26.294 1.00 0.01 N
ATOM 17 C5 G A 505 -29.298-103.014 27.359 1.00 0.01 C
ATOM 18 C6 G A 505 -28.344-103.639 28.175 1.00 0.01 C
ATOM 19 O6 G A 505 -27.947-104.794 28.111 1.00 0.01 O
ATOM 20 N1 G A 505 -27.853-102.788 29.147 1.00 0.01 N
ATOM 21 C2 G A 505 -28.250-101.489 29.297 1.00 0.01 C
ATOM 22 N2 G A 505 -27.656-100.818 30.294 1.00 0.01 N
ATOM 23 N3 G A 505 -29.143-100.891 28.525 1.00 0.01 N
ATOM 24 C4 G A 505 -29.618-101.707 27.577 1.00 0.01 C
ATOM 25 P A A 506 -32.958 -96.598 24.447 1.00 0.01 P
ATOM 26 OP1 A A 506 -34.397 -96.877 24.251 1.00 0.01 O
ATOM 27 OP2 A A 506 -32.049 -96.645 23.272 1.00 0.01 O
ATOM 28 O5' A A 506 -32.773 -95.223 25.218 1.00 0.01 O
TER
ATOM 1 O3' G B 505 -32.407 -97.669 25.493 1.00 0.01 O
ATOM 2 P A B 506 -32.958 -96.598 24.447 1.00 0.01 P
ATOM 3 OP1 A B 506 -34.397 -96.877 24.251 1.00 0.01 O
ATOM 4 OP2 A B 506 -32.049 -96.645 23.272 1.00 0.01 O
ATOM 5 O5' A B 506 -32.773 -95.223 25.218 1.00 0.01 O
ATOM 6 C5' A B 506 -33.822 -94.668 25.997 1.00 0.01 C
ATOM 7 C4' A B 506 -33.364 -94.340 27.382 1.00 0.01 C
ATOM 8 O4' A B 506 -32.783 -95.509 27.962 1.00 0.01 O
ATOM 9 C3' A B 506 -32.267 -93.305 27.488 1.00 0.01 C
ATOM 10 O3' A B 506 -32.758 -91.979 27.432 1.00 0.01 O
ATOM 11 C2' A B 506 -31.610 -93.641 28.818 1.00 0.01 C
ATOM 12 O2' A B 506 -32.323 -93.063 29.903 1.00 0.01 O
ATOM 13 C1' A B 506 -31.776 -95.150 28.880 1.00 0.01 C
ATOM 14 N9 A B 506 -30.529 -95.869 28.542 1.00 0.01 N
ATOM 15 C8 A B 506 -30.332 -96.759 27.520 1.00 0.01 C
ATOM 16 N7 A B 506 -29.126 -97.256 27.465 1.00 0.01 N
ATOM 17 C5 A B 506 -28.483 -96.660 28.529 1.00 0.01 C
ATOM 18 C6 A B 506 -27.173 -96.788 28.983 1.00 0.01 C
ATOM 19 N6 A B 506 -26.275 -97.584 28.434 1.00 0.01 N
ATOM 20 N1 A B 506 -26.836 -96.070 30.057 1.00 0.01 N
ATOM 21 C2 A B 506 -27.768 -95.290 30.634 1.00 0.01 C
ATOM 22 N3 A B 506 -29.039 -95.086 30.303 1.00 0.01 N
ATOM 23 C4 A B 506 -29.335 -95.811 29.213 1.00 0.01 C
ATOM 24 P A B 507 -32.502 -91.067 26.132 1.00 15.07 P
ATOM 25 OP1 A B 507 -31.881 -91.921 25.080 1.00 15.07 O
ATOM 26 OP2 A B 507 -31.783 -89.870 26.597 1.00 15.07 O
ATOM 27 O5' A B 507 -33.969 -90.677 25.691 1.00 15.07 O
TER
Atoms:
OP1: (-36.564,-100.443,25.255)
OP2: (-35.903,-102.899,25.411)
C3': (-33.036,-98.928,25.625)
C1': (-31.175,-100.104,26.414)
C5': (-34.371,-100.088,27.430)
O6: (-27.947,-104.794,28.111)
O4': (-31.993,-99.854,27.518)
C8: (-30.747,-102.525,25.887)
C2: (-28.250,-101.489,29.297)
C6: (-28.344,-103.639,28.175)
C5: (-29.298,-103.014,27.359)
C4: (-29.618,-101.707,27.577)
P: (-35.943,-101.545,26.014)
C4': (-33.215,-99.206,27.092)
C2': (-32.082,-100.034,25.204)
O2': (-31.355,-99.768,24.025)
N1: (-27.853,-102.788,29.147)
N2: (-27.656,-100.818,30.294)
N3: (-29.143,-100.891,28.525)
N7: (-30.013,-103.520,26.294)
N9: (-30.542,-101.395,26.615)
O5': (-34.511,-101.122,26.483)
O3': (-32.407,-97.669,25.493)
OP2: (-35.903,-102.899,25.411)
C3': (-33.036,-98.928,25.625)
C1': (-31.175,-100.104,26.414)
C5': (-34.371,-100.088,27.430)
O6: (-27.947,-104.794,28.111)
O4': (-31.993,-99.854,27.518)
C8: (-30.747,-102.525,25.887)
C2: (-28.250,-101.489,29.297)
C6: (-28.344,-103.639,28.175)
C5: (-29.298,-103.014,27.359)
C4: (-29.618,-101.707,27.577)
P: (-35.943,-101.545,26.014)
C4': (-33.215,-99.206,27.092)
C2': (-32.082,-100.034,25.204)
O2': (-31.355,-99.768,24.025)
N1: (-27.853,-102.788,29.147)
N2: (-27.656,-100.818,30.294)
N3: (-29.143,-100.891,28.525)
N7: (-30.013,-103.520,26.294)
N9: (-30.542,-101.395,26.615)
O5': (-34.511,-101.122,26.483)
O3': (-32.407,-97.669,25.493)
OP1: (-34.397,-96.877,24.251)
OP2: (-32.049,-96.645,23.272)
C3': (-32.267,-93.305,27.488)
C1': (-31.776,-95.150,28.880)
C5': (-33.822,-94.668,25.997)
O4': (-32.783,-95.509,27.962)
C8: (-30.332,-96.759,27.520)
O2': (-32.323,-93.063,29.903)
C6: (-27.173,-96.788,28.983)
C5: (-28.483,-96.660,28.529)
C4: (-29.335,-95.811,29.213)
P: (-32.958,-96.598,24.447)
C4': (-33.364,-94.340,27.382)
C2': (-31.610,-93.641,28.818)
C2: (-27.768,-95.290,30.634)
N1: (-26.836,-96.070,30.057)
N3: (-29.039,-95.086,30.303)
N6: (-26.275,-97.584,28.434)
N7: (-29.126,-97.256,27.465)
N9: (-30.529,-95.869,28.542)
O5': (-32.773,-95.223,25.218)
O3': (-32.758,-91.979,27.432)
OP2: (-32.049,-96.645,23.272)
C3': (-32.267,-93.305,27.488)
C1': (-31.776,-95.150,28.880)
C5': (-33.822,-94.668,25.997)
O4': (-32.783,-95.509,27.962)
C8: (-30.332,-96.759,27.520)
O2': (-32.323,-93.063,29.903)
C6: (-27.173,-96.788,28.983)
C5: (-28.483,-96.660,28.529)
C4: (-29.335,-95.811,29.213)
P: (-32.958,-96.598,24.447)
C4': (-33.364,-94.340,27.382)
C2': (-31.610,-93.641,28.818)
C2: (-27.768,-95.290,30.634)
N1: (-26.836,-96.070,30.057)
N3: (-29.039,-95.086,30.303)
N6: (-26.275,-97.584,28.434)
N7: (-29.126,-97.256,27.465)
N9: (-30.529,-95.869,28.542)
O5': (-32.773,-95.223,25.218)
O3': (-32.758,-91.979,27.432)
Image (generated by PyMOL):