Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A505:A506
Extra
PDB:
ATOM 1 O3' A A 504 -14.299 147.076 213.726 1.00 7.40 O
ATOM 2 P G A 505 -13.313 145.834 213.728 1.00 7.29 P
ATOM 3 OP1 G A 505 -13.694 145.012 212.561 1.00 7.29 O
ATOM 4 OP2 G A 505 -13.345 145.214 215.087 1.00 7.29 O
ATOM 5 O5' G A 505 -11.904 146.511 213.489 1.00 7.29 O
ATOM 6 C5' G A 505 -11.443 146.796 212.178 1.00 7.29 C
ATOM 7 C4' G A 505 -10.143 146.098 211.905 1.00 7.29 C
ATOM 8 O4' G A 505 -9.185 146.478 212.931 1.00 7.29 O
ATOM 9 C3' G A 505 -10.220 144.579 211.951 1.00 7.29 C
ATOM 10 O3' G A 505 -9.240 144.025 211.071 1.00 7.29 O
ATOM 11 C2' G A 505 -9.844 144.289 213.385 1.00 7.29 C
ATOM 12 O2' G A 505 -9.400 142.978 213.601 1.00 7.29 O
ATOM 13 C1' G A 505 -8.741 145.327 213.603 1.00 7.29 C
ATOM 14 N9 G A 505 -8.495 145.689 215.002 1.00 7.28 N
ATOM 15 C8 G A 505 -9.188 145.247 216.096 1.00 7.28 C
ATOM 16 N7 G A 505 -8.744 145.725 217.235 1.00 7.28 N
ATOM 17 C5 G A 505 -7.683 146.525 216.869 1.00 7.28 C
ATOM 18 C6 G A 505 -6.828 147.291 217.679 1.00 7.28 C
ATOM 19 O6 G A 505 -6.852 147.403 218.902 1.00 7.28 O
ATOM 20 N1 G A 505 -5.872 147.978 216.971 1.00 7.28 N
ATOM 21 C2 G A 505 -5.771 147.926 215.624 1.00 7.28 C
ATOM 22 N2 G A 505 -4.773 148.667 215.112 1.00 7.28 N
ATOM 23 N3 G A 505 -6.577 147.205 214.847 1.00 7.28 N
ATOM 24 C4 G A 505 -7.513 146.520 215.520 1.00 7.28 C
ATOM 25 P A A 506 -9.681 143.409 209.644 1.00 7.47 P
ATOM 26 OP1 A A 506 -11.162 143.435 209.596 1.00 7.47 O
ATOM 27 OP2 A A 506 -8.994 142.108 209.510 1.00 7.47 O
ATOM 28 O5' A A 506 -9.099 144.449 208.577 1.00 7.47 O
TER
ATOM 1 O3' G B 505 -9.240 144.025 211.071 1.00 7.29 O
ATOM 2 P A B 506 -9.681 143.409 209.644 1.00 7.47 P
ATOM 3 OP1 A B 506 -11.162 143.435 209.596 1.00 7.47 O
ATOM 4 OP2 A B 506 -8.994 142.108 209.510 1.00 7.47 O
ATOM 5 O5' A B 506 -9.099 144.449 208.577 1.00 7.47 O
ATOM 6 C5' A B 506 -9.926 145.462 208.003 1.00 7.47 C
ATOM 7 C4' A B 506 -9.089 146.582 207.451 1.00 7.47 C
ATOM 8 O4' A B 506 -8.500 147.307 208.543 1.00 7.47 O
ATOM 9 C3' A B 506 -7.917 146.142 206.574 1.00 7.47 C
ATOM 10 O3' A B 506 -8.257 146.122 205.199 1.00 7.47 O
ATOM 11 C2' A B 506 -6.816 147.134 206.875 1.00 7.47 C
ATOM 12 O2' A B 506 -6.883 148.229 205.975 1.00 7.47 O
ATOM 13 C1' A B 506 -7.159 147.614 208.278 1.00 7.47 C
ATOM 14 N9 A B 506 -6.321 146.983 209.311 1.00 8.13 N
ATOM 15 C8 A B 506 -6.550 145.910 210.145 1.00 8.13 C
ATOM 16 N7 A B 506 -5.580 145.664 211.002 1.00 8.13 N
ATOM 17 C5 A B 506 -4.651 146.646 210.697 1.00 8.13 C
ATOM 18 C6 A B 506 -3.389 146.962 211.207 1.00 8.13 C
ATOM 19 N6 A B 506 -2.774 146.307 212.189 1.00 8.13 N
ATOM 20 N1 A B 506 -2.756 148.023 210.681 1.00 8.13 N
ATOM 21 C2 A B 506 -3.331 148.711 209.705 1.00 8.13 C
ATOM 22 N3 A B 506 -4.506 148.521 209.135 1.00 8.13 N
ATOM 23 C4 A B 506 -5.107 147.464 209.682 1.00 8.13 C
ATOM 24 P A B 507 -7.846 144.880 204.264 1.00 43.09 P
ATOM 25 OP1 A B 507 -7.317 143.799 205.154 1.00 43.09 O
ATOM 26 OP2 A B 507 -6.975 145.423 203.190 1.00 43.09 O
ATOM 27 O5' A B 507 -9.246 144.442 203.654 1.00 43.09 O
TER
ATOM 2 P G A 505 -13.313 145.834 213.728 1.00 7.29 P
ATOM 3 OP1 G A 505 -13.694 145.012 212.561 1.00 7.29 O
ATOM 4 OP2 G A 505 -13.345 145.214 215.087 1.00 7.29 O
ATOM 5 O5' G A 505 -11.904 146.511 213.489 1.00 7.29 O
ATOM 6 C5' G A 505 -11.443 146.796 212.178 1.00 7.29 C
ATOM 7 C4' G A 505 -10.143 146.098 211.905 1.00 7.29 C
ATOM 8 O4' G A 505 -9.185 146.478 212.931 1.00 7.29 O
ATOM 9 C3' G A 505 -10.220 144.579 211.951 1.00 7.29 C
ATOM 10 O3' G A 505 -9.240 144.025 211.071 1.00 7.29 O
ATOM 11 C2' G A 505 -9.844 144.289 213.385 1.00 7.29 C
ATOM 12 O2' G A 505 -9.400 142.978 213.601 1.00 7.29 O
ATOM 13 C1' G A 505 -8.741 145.327 213.603 1.00 7.29 C
ATOM 14 N9 G A 505 -8.495 145.689 215.002 1.00 7.28 N
ATOM 15 C8 G A 505 -9.188 145.247 216.096 1.00 7.28 C
ATOM 16 N7 G A 505 -8.744 145.725 217.235 1.00 7.28 N
ATOM 17 C5 G A 505 -7.683 146.525 216.869 1.00 7.28 C
ATOM 18 C6 G A 505 -6.828 147.291 217.679 1.00 7.28 C
ATOM 19 O6 G A 505 -6.852 147.403 218.902 1.00 7.28 O
ATOM 20 N1 G A 505 -5.872 147.978 216.971 1.00 7.28 N
ATOM 21 C2 G A 505 -5.771 147.926 215.624 1.00 7.28 C
ATOM 22 N2 G A 505 -4.773 148.667 215.112 1.00 7.28 N
ATOM 23 N3 G A 505 -6.577 147.205 214.847 1.00 7.28 N
ATOM 24 C4 G A 505 -7.513 146.520 215.520 1.00 7.28 C
ATOM 25 P A A 506 -9.681 143.409 209.644 1.00 7.47 P
ATOM 26 OP1 A A 506 -11.162 143.435 209.596 1.00 7.47 O
ATOM 27 OP2 A A 506 -8.994 142.108 209.510 1.00 7.47 O
ATOM 28 O5' A A 506 -9.099 144.449 208.577 1.00 7.47 O
TER
ATOM 1 O3' G B 505 -9.240 144.025 211.071 1.00 7.29 O
ATOM 2 P A B 506 -9.681 143.409 209.644 1.00 7.47 P
ATOM 3 OP1 A B 506 -11.162 143.435 209.596 1.00 7.47 O
ATOM 4 OP2 A B 506 -8.994 142.108 209.510 1.00 7.47 O
ATOM 5 O5' A B 506 -9.099 144.449 208.577 1.00 7.47 O
ATOM 6 C5' A B 506 -9.926 145.462 208.003 1.00 7.47 C
ATOM 7 C4' A B 506 -9.089 146.582 207.451 1.00 7.47 C
ATOM 8 O4' A B 506 -8.500 147.307 208.543 1.00 7.47 O
ATOM 9 C3' A B 506 -7.917 146.142 206.574 1.00 7.47 C
ATOM 10 O3' A B 506 -8.257 146.122 205.199 1.00 7.47 O
ATOM 11 C2' A B 506 -6.816 147.134 206.875 1.00 7.47 C
ATOM 12 O2' A B 506 -6.883 148.229 205.975 1.00 7.47 O
ATOM 13 C1' A B 506 -7.159 147.614 208.278 1.00 7.47 C
ATOM 14 N9 A B 506 -6.321 146.983 209.311 1.00 8.13 N
ATOM 15 C8 A B 506 -6.550 145.910 210.145 1.00 8.13 C
ATOM 16 N7 A B 506 -5.580 145.664 211.002 1.00 8.13 N
ATOM 17 C5 A B 506 -4.651 146.646 210.697 1.00 8.13 C
ATOM 18 C6 A B 506 -3.389 146.962 211.207 1.00 8.13 C
ATOM 19 N6 A B 506 -2.774 146.307 212.189 1.00 8.13 N
ATOM 20 N1 A B 506 -2.756 148.023 210.681 1.00 8.13 N
ATOM 21 C2 A B 506 -3.331 148.711 209.705 1.00 8.13 C
ATOM 22 N3 A B 506 -4.506 148.521 209.135 1.00 8.13 N
ATOM 23 C4 A B 506 -5.107 147.464 209.682 1.00 8.13 C
ATOM 24 P A B 507 -7.846 144.880 204.264 1.00 43.09 P
ATOM 25 OP1 A B 507 -7.317 143.799 205.154 1.00 43.09 O
ATOM 26 OP2 A B 507 -6.975 145.423 203.190 1.00 43.09 O
ATOM 27 O5' A B 507 -9.246 144.442 203.654 1.00 43.09 O
TER
Atoms:
OP1: (-13.694,145.012,212.561)
OP2: (-13.345,145.214,215.087)
C3': (-10.220,144.579,211.951)
C1': (-8.741,145.327,213.603)
C5': (-11.443,146.796,212.178)
O6: (-6.852,147.403,218.902)
O4': (-9.185,146.478,212.931)
C8: (-9.188,145.247,216.096)
C2: (-5.771,147.926,215.624)
C6: (-6.828,147.291,217.679)
C5: (-7.683,146.525,216.869)
C4: (-7.513,146.520,215.520)
P: (-13.313,145.834,213.728)
C4': (-10.143,146.098,211.905)
C2': (-9.844,144.289,213.385)
O2': (-9.400,142.978,213.601)
N1: (-5.872,147.978,216.971)
N2: (-4.773,148.667,215.112)
N3: (-6.577,147.205,214.847)
N7: (-8.744,145.725,217.235)
N9: (-8.495,145.689,215.002)
O5': (-11.904,146.511,213.489)
O3': (-9.240,144.025,211.071)
OP2: (-13.345,145.214,215.087)
C3': (-10.220,144.579,211.951)
C1': (-8.741,145.327,213.603)
C5': (-11.443,146.796,212.178)
O6: (-6.852,147.403,218.902)
O4': (-9.185,146.478,212.931)
C8: (-9.188,145.247,216.096)
C2: (-5.771,147.926,215.624)
C6: (-6.828,147.291,217.679)
C5: (-7.683,146.525,216.869)
C4: (-7.513,146.520,215.520)
P: (-13.313,145.834,213.728)
C4': (-10.143,146.098,211.905)
C2': (-9.844,144.289,213.385)
O2': (-9.400,142.978,213.601)
N1: (-5.872,147.978,216.971)
N2: (-4.773,148.667,215.112)
N3: (-6.577,147.205,214.847)
N7: (-8.744,145.725,217.235)
N9: (-8.495,145.689,215.002)
O5': (-11.904,146.511,213.489)
O3': (-9.240,144.025,211.071)
OP1: (-11.162,143.435,209.596)
OP2: (-8.994,142.108,209.510)
C3': (-7.917,146.142,206.574)
C1': (-7.159,147.614,208.278)
C5': (-9.926,145.462,208.003)
O4': (-8.500,147.307,208.543)
C8: (-6.550,145.910,210.145)
O2': (-6.883,148.229,205.975)
C6: (-3.389,146.962,211.207)
C5: (-4.651,146.646,210.697)
C4: (-5.107,147.464,209.682)
P: (-9.681,143.409,209.644)
C4': (-9.089,146.582,207.451)
C2': (-6.816,147.134,206.875)
C2: (-3.331,148.711,209.705)
N1: (-2.756,148.023,210.681)
N3: (-4.506,148.521,209.135)
N6: (-2.774,146.307,212.189)
N7: (-5.580,145.664,211.002)
N9: (-6.321,146.983,209.311)
O5': (-9.099,144.449,208.577)
O3': (-8.257,146.122,205.199)
OP2: (-8.994,142.108,209.510)
C3': (-7.917,146.142,206.574)
C1': (-7.159,147.614,208.278)
C5': (-9.926,145.462,208.003)
O4': (-8.500,147.307,208.543)
C8: (-6.550,145.910,210.145)
O2': (-6.883,148.229,205.975)
C6: (-3.389,146.962,211.207)
C5: (-4.651,146.646,210.697)
C4: (-5.107,147.464,209.682)
P: (-9.681,143.409,209.644)
C4': (-9.089,146.582,207.451)
C2': (-6.816,147.134,206.875)
C2: (-3.331,148.711,209.705)
N1: (-2.756,148.023,210.681)
N3: (-4.506,148.521,209.135)
N6: (-2.774,146.307,212.189)
N7: (-5.580,145.664,211.002)
N9: (-6.321,146.983,209.311)
O5': (-9.099,144.449,208.577)
O3': (-8.257,146.122,205.199)
Image (generated by PyMOL):