Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21237:21238
Extra
PDB:
ATOM 1 O3' U A1236 -72.421 -38.532 -3.699 1.00109.50 O
ATOM 2 P G A1237 -73.468 -37.764 -4.638 1.00119.01 P
ATOM 3 OP1 G A1237 -74.817 -38.140 -4.168 1.00119.22 O
ATOM 4 OP2 G A1237 -73.089 -38.049 -6.046 1.00119.63 O
ATOM 5 O5' G A1237 -73.192 -36.244 -4.293 1.00118.90 O
ATOM 6 C5' G A1237 -73.207 -35.806 -2.946 1.00118.21 C
ATOM 7 C4' G A1237 -72.785 -34.371 -2.829 1.00118.17 C
ATOM 8 O4' G A1237 -71.462 -34.218 -3.405 1.00118.03 O
ATOM 9 C3' G A1237 -73.690 -33.374 -3.544 1.00119.04 C
ATOM 10 O3' G A1237 -73.796 -32.188 -2.770 1.00118.81 O
ATOM 11 C2' G A1237 -72.945 -33.079 -4.843 1.00119.54 C
ATOM 12 O2' G A1237 -73.188 -31.791 -5.380 1.00120.14 O
ATOM 13 C1' G A1237 -71.486 -33.248 -4.429 1.00118.75 C
ATOM 14 N9 G A1237 -70.629 -33.720 -5.510 1.00119.01 N
ATOM 15 C8 G A1237 -70.964 -34.448 -6.629 1.00119.67 C
ATOM 16 N7 G A1237 -69.937 -34.699 -7.403 1.00119.74 N
ATOM 17 C5 G A1237 -68.871 -34.103 -6.747 1.00119.08 C
ATOM 18 C6 G A1237 -67.498 -34.024 -7.082 1.00118.85 C
ATOM 19 O6 G A1237 -66.915 -34.479 -8.062 1.00119.19 O
ATOM 20 N1 G A1237 -66.774 -33.317 -6.128 1.00118.16 N
ATOM 21 C2 G A1237 -67.313 -32.753 -4.985 1.00117.74 C
ATOM 22 N2 G A1237 -66.464 -32.096 -4.179 1.00117.10 N
ATOM 23 N3 G A1237 -68.593 -32.813 -4.653 1.00117.95 N
ATOM 24 C4 G A1237 -69.291 -33.499 -5.579 1.00118.62 C
ATOM 25 P A A1238 -75.228 -31.716 -2.238 1.00122.16 P
ATOM 26 OP1 A A1238 -75.752 -32.800 -1.368 1.00121.73 O
ATOM 27 OP2 A A1238 -76.020 -31.309 -3.427 1.00123.21 O
ATOM 28 O5' A A1238 -74.867 -30.444 -1.362 1.00121.71 O
TER
ATOM 1 O3' G B1237 -73.796 -32.188 -2.770 1.00118.81 O
ATOM 2 P A B1238 -75.228 -31.716 -2.238 1.00122.16 P
ATOM 3 OP1 A B1238 -75.752 -32.800 -1.368 1.00121.73 O
ATOM 4 OP2 A B1238 -76.020 -31.309 -3.427 1.00123.21 O
ATOM 5 O5' A B1238 -74.867 -30.444 -1.362 1.00121.71 O
ATOM 6 C5' A B1238 -74.336 -30.595 -0.059 1.00120.77 C
ATOM 7 C4' A B1238 -73.543 -29.392 0.349 1.00120.41 C
ATOM 8 O4' A B1238 -72.247 -29.422 -0.306 1.00120.28 O
ATOM 9 C3' A B1238 -74.174 -28.042 0.001 1.00121.06 C
ATOM 10 O3' A B1238 -73.913 -27.117 1.053 1.00120.52 O
ATOM 11 C2' A B1238 -73.398 -27.614 -1.239 1.00121.52 C
ATOM 12 O2' A B1238 -73.359 -26.217 -1.446 1.00121.86 O
ATOM 13 C1' A B1238 -72.015 -28.176 -0.928 1.00120.73 C
ATOM 14 N9 A B1238 -71.161 -28.386 -2.106 1.00121.05 N
ATOM 15 C8 A B1238 -71.222 -29.365 -3.077 1.00121.47 C
ATOM 16 N7 A B1238 -70.293 -29.258 -3.998 1.00121.69 N
ATOM 17 C5 A B1238 -69.567 -28.138 -3.605 1.00121.39 C
ATOM 18 C6 A B1238 -68.447 -27.489 -4.152 1.00121.44 C
ATOM 19 N6 A B1238 -67.831 -27.892 -5.263 1.00121.83 N
ATOM 20 N1 A B1238 -67.971 -26.403 -3.510 1.00121.09 N
ATOM 21 C2 A B1238 -68.596 -25.992 -2.404 1.00120.72 C
ATOM 22 N3 A B1238 -69.645 -26.515 -1.784 1.00120.63 N
ATOM 23 C4 A B1238 -70.086 -27.599 -2.442 1.00120.99 C
ATOM 24 P U B1239 -74.805 -27.146 2.388 1.00113.43 P
ATOM 25 OP1 U B1239 -76.228 -27.216 1.950 1.00114.24 O
ATOM 26 OP2 U B1239 -74.365 -25.997 3.233 1.00112.98 O
ATOM 27 O5' U B1239 -74.376 -28.532 3.068 1.00112.69 O
TER
ATOM 2 P G A1237 -73.468 -37.764 -4.638 1.00119.01 P
ATOM 3 OP1 G A1237 -74.817 -38.140 -4.168 1.00119.22 O
ATOM 4 OP2 G A1237 -73.089 -38.049 -6.046 1.00119.63 O
ATOM 5 O5' G A1237 -73.192 -36.244 -4.293 1.00118.90 O
ATOM 6 C5' G A1237 -73.207 -35.806 -2.946 1.00118.21 C
ATOM 7 C4' G A1237 -72.785 -34.371 -2.829 1.00118.17 C
ATOM 8 O4' G A1237 -71.462 -34.218 -3.405 1.00118.03 O
ATOM 9 C3' G A1237 -73.690 -33.374 -3.544 1.00119.04 C
ATOM 10 O3' G A1237 -73.796 -32.188 -2.770 1.00118.81 O
ATOM 11 C2' G A1237 -72.945 -33.079 -4.843 1.00119.54 C
ATOM 12 O2' G A1237 -73.188 -31.791 -5.380 1.00120.14 O
ATOM 13 C1' G A1237 -71.486 -33.248 -4.429 1.00118.75 C
ATOM 14 N9 G A1237 -70.629 -33.720 -5.510 1.00119.01 N
ATOM 15 C8 G A1237 -70.964 -34.448 -6.629 1.00119.67 C
ATOM 16 N7 G A1237 -69.937 -34.699 -7.403 1.00119.74 N
ATOM 17 C5 G A1237 -68.871 -34.103 -6.747 1.00119.08 C
ATOM 18 C6 G A1237 -67.498 -34.024 -7.082 1.00118.85 C
ATOM 19 O6 G A1237 -66.915 -34.479 -8.062 1.00119.19 O
ATOM 20 N1 G A1237 -66.774 -33.317 -6.128 1.00118.16 N
ATOM 21 C2 G A1237 -67.313 -32.753 -4.985 1.00117.74 C
ATOM 22 N2 G A1237 -66.464 -32.096 -4.179 1.00117.10 N
ATOM 23 N3 G A1237 -68.593 -32.813 -4.653 1.00117.95 N
ATOM 24 C4 G A1237 -69.291 -33.499 -5.579 1.00118.62 C
ATOM 25 P A A1238 -75.228 -31.716 -2.238 1.00122.16 P
ATOM 26 OP1 A A1238 -75.752 -32.800 -1.368 1.00121.73 O
ATOM 27 OP2 A A1238 -76.020 -31.309 -3.427 1.00123.21 O
ATOM 28 O5' A A1238 -74.867 -30.444 -1.362 1.00121.71 O
TER
ATOM 1 O3' G B1237 -73.796 -32.188 -2.770 1.00118.81 O
ATOM 2 P A B1238 -75.228 -31.716 -2.238 1.00122.16 P
ATOM 3 OP1 A B1238 -75.752 -32.800 -1.368 1.00121.73 O
ATOM 4 OP2 A B1238 -76.020 -31.309 -3.427 1.00123.21 O
ATOM 5 O5' A B1238 -74.867 -30.444 -1.362 1.00121.71 O
ATOM 6 C5' A B1238 -74.336 -30.595 -0.059 1.00120.77 C
ATOM 7 C4' A B1238 -73.543 -29.392 0.349 1.00120.41 C
ATOM 8 O4' A B1238 -72.247 -29.422 -0.306 1.00120.28 O
ATOM 9 C3' A B1238 -74.174 -28.042 0.001 1.00121.06 C
ATOM 10 O3' A B1238 -73.913 -27.117 1.053 1.00120.52 O
ATOM 11 C2' A B1238 -73.398 -27.614 -1.239 1.00121.52 C
ATOM 12 O2' A B1238 -73.359 -26.217 -1.446 1.00121.86 O
ATOM 13 C1' A B1238 -72.015 -28.176 -0.928 1.00120.73 C
ATOM 14 N9 A B1238 -71.161 -28.386 -2.106 1.00121.05 N
ATOM 15 C8 A B1238 -71.222 -29.365 -3.077 1.00121.47 C
ATOM 16 N7 A B1238 -70.293 -29.258 -3.998 1.00121.69 N
ATOM 17 C5 A B1238 -69.567 -28.138 -3.605 1.00121.39 C
ATOM 18 C6 A B1238 -68.447 -27.489 -4.152 1.00121.44 C
ATOM 19 N6 A B1238 -67.831 -27.892 -5.263 1.00121.83 N
ATOM 20 N1 A B1238 -67.971 -26.403 -3.510 1.00121.09 N
ATOM 21 C2 A B1238 -68.596 -25.992 -2.404 1.00120.72 C
ATOM 22 N3 A B1238 -69.645 -26.515 -1.784 1.00120.63 N
ATOM 23 C4 A B1238 -70.086 -27.599 -2.442 1.00120.99 C
ATOM 24 P U B1239 -74.805 -27.146 2.388 1.00113.43 P
ATOM 25 OP1 U B1239 -76.228 -27.216 1.950 1.00114.24 O
ATOM 26 OP2 U B1239 -74.365 -25.997 3.233 1.00112.98 O
ATOM 27 O5' U B1239 -74.376 -28.532 3.068 1.00112.69 O
TER
Atoms:
OP1: (-74.817,-38.140,-4.168)
OP2: (-73.089,-38.049,-6.046)
C3': (-73.690,-33.374,-3.544)
C1': (-71.486,-33.248,-4.429)
C5': (-73.207,-35.806,-2.946)
O6: (-66.915,-34.479,-8.062)
O4': (-71.462,-34.218,-3.405)
C8: (-70.964,-34.448,-6.629)
C2: (-67.313,-32.753,-4.985)
C6: (-67.498,-34.024,-7.082)
C5: (-68.871,-34.103,-6.747)
C4: (-69.291,-33.499,-5.579)
P: (-73.468,-37.764,-4.638)
C4': (-72.785,-34.371,-2.829)
C2': (-72.945,-33.079,-4.843)
O2': (-73.188,-31.791,-5.380)
N1: (-66.774,-33.317,-6.128)
N2: (-66.464,-32.096,-4.179)
N3: (-68.593,-32.813,-4.653)
N7: (-69.937,-34.699,-7.403)
N9: (-70.629,-33.720,-5.510)
O5': (-73.192,-36.244,-4.293)
O3': (-73.796,-32.188,-2.770)
OP2: (-73.089,-38.049,-6.046)
C3': (-73.690,-33.374,-3.544)
C1': (-71.486,-33.248,-4.429)
C5': (-73.207,-35.806,-2.946)
O6: (-66.915,-34.479,-8.062)
O4': (-71.462,-34.218,-3.405)
C8: (-70.964,-34.448,-6.629)
C2: (-67.313,-32.753,-4.985)
C6: (-67.498,-34.024,-7.082)
C5: (-68.871,-34.103,-6.747)
C4: (-69.291,-33.499,-5.579)
P: (-73.468,-37.764,-4.638)
C4': (-72.785,-34.371,-2.829)
C2': (-72.945,-33.079,-4.843)
O2': (-73.188,-31.791,-5.380)
N1: (-66.774,-33.317,-6.128)
N2: (-66.464,-32.096,-4.179)
N3: (-68.593,-32.813,-4.653)
N7: (-69.937,-34.699,-7.403)
N9: (-70.629,-33.720,-5.510)
O5': (-73.192,-36.244,-4.293)
O3': (-73.796,-32.188,-2.770)
OP1: (-75.752,-32.800,-1.368)
OP2: (-76.020,-31.309,-3.427)
C3': (-74.174,-28.042,0.001)
C1': (-72.015,-28.176,-0.928)
C5': (-74.336,-30.595,-0.059)
O4': (-72.247,-29.422,-0.306)
C8: (-71.222,-29.365,-3.077)
O2': (-73.359,-26.217,-1.446)
C6: (-68.447,-27.489,-4.152)
C5: (-69.567,-28.138,-3.605)
C4: (-70.086,-27.599,-2.442)
P: (-75.228,-31.716,-2.238)
C4': (-73.543,-29.392,0.349)
C2': (-73.398,-27.614,-1.239)
C2: (-68.596,-25.992,-2.404)
N1: (-67.971,-26.403,-3.510)
N3: (-69.645,-26.515,-1.784)
N6: (-67.831,-27.892,-5.263)
N7: (-70.293,-29.258,-3.998)
N9: (-71.161,-28.386,-2.106)
O5': (-74.867,-30.444,-1.362)
O3': (-73.913,-27.117,1.053)
OP2: (-76.020,-31.309,-3.427)
C3': (-74.174,-28.042,0.001)
C1': (-72.015,-28.176,-0.928)
C5': (-74.336,-30.595,-0.059)
O4': (-72.247,-29.422,-0.306)
C8: (-71.222,-29.365,-3.077)
O2': (-73.359,-26.217,-1.446)
C6: (-68.447,-27.489,-4.152)
C5: (-69.567,-28.138,-3.605)
C4: (-70.086,-27.599,-2.442)
P: (-75.228,-31.716,-2.238)
C4': (-73.543,-29.392,0.349)
C2': (-73.398,-27.614,-1.239)
C2: (-68.596,-25.992,-2.404)
N1: (-67.971,-26.403,-3.510)
N3: (-69.645,-26.515,-1.784)
N6: (-67.831,-27.892,-5.263)
N7: (-70.293,-29.258,-3.998)
N9: (-71.161,-28.386,-2.106)
O5': (-74.867,-30.444,-1.362)
O3': (-73.913,-27.117,1.053)
Image (generated by PyMOL):