Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0725:02226
Extra
PDB:
ATOM 1 O3' A A 724 58.546 50.920 58.664 1.00 86.16 O
ATOM 2 P G A 725 57.234 51.788 58.331 1.00 83.11 P
ATOM 3 OP1 G A 725 56.066 51.150 58.988 1.00 83.37 O
ATOM 4 OP2 G A 725 57.210 52.024 56.867 1.00 83.77 O
ATOM 5 O5' G A 725 57.507 53.174 59.064 1.00 82.12 O
ATOM 6 C5' G A 725 57.856 53.210 60.464 1.00 78.84 C
ATOM 7 C4' G A 725 58.563 54.505 60.805 1.00 75.82 C
ATOM 8 O4' G A 725 59.788 54.609 60.029 1.00 75.26 O
ATOM 9 C3' G A 725 57.823 55.792 60.478 1.00 72.52 C
ATOM 10 O3' G A 725 56.839 56.129 61.450 1.00 70.66 O
ATOM 11 C2' G A 725 58.965 56.792 60.419 1.00 72.12 C
ATOM 12 O2' G A 725 59.447 57.139 61.701 1.00 70.27 O
ATOM 13 C1' G A 725 60.025 55.967 59.690 1.00 73.20 C
ATOM 14 N9 G A 725 59.901 56.110 58.240 1.00 73.30 N
ATOM 15 C8 G A 725 59.203 55.300 57.376 1.00 73.13 C
ATOM 16 N7 G A 725 59.239 55.718 56.140 1.00 73.24 N
ATOM 17 C5 G A 725 60.015 56.867 56.190 1.00 73.52 C
ATOM 18 C6 G A 725 60.398 57.761 55.162 1.00 73.43 C
ATOM 19 O6 G A 725 60.121 57.716 53.958 1.00 74.01 O
ATOM 20 N1 G A 725 61.184 58.795 55.653 1.00 73.02 N
ATOM 21 C2 G A 725 61.562 58.947 56.961 1.00 73.23 C
ATOM 22 N2 G A 725 62.336 60.005 57.240 1.00 73.65 N
ATOM 23 N3 G A 725 61.213 58.124 57.927 1.00 73.92 N
ATOM 24 C4 G A 725 60.442 57.115 57.475 1.00 73.50 C
ATOM 25 P G A 726 55.744 57.258 61.111 1.00 68.33 P
ATOM 26 OP1 G A 726 54.602 57.125 62.053 1.00 67.75 O
ATOM 27 OP2 G A 726 55.494 57.242 59.646 1.00 66.72 O
ATOM 28 O5' G A 726 56.498 58.608 61.483 1.00 66.62 O
TER
ATOM 1 O3' U B2225 63.596 60.713 60.166 1.00 56.00 O
ATOM 2 P G B2226 62.817 61.738 61.121 1.00 55.21 P
ATOM 3 OP1 G B2226 62.178 62.775 60.281 1.00 56.02 O
ATOM 4 OP2 G B2226 63.736 62.140 62.220 1.00 54.70 O
ATOM 5 O5' G B2226 61.658 60.836 61.715 1.00 54.31 O
ATOM 6 C5' G B2226 60.967 61.214 62.897 1.00 55.26 C
ATOM 7 C4' G B2226 60.306 60.007 63.496 1.00 55.31 C
ATOM 8 O4' G B2226 61.308 59.036 63.897 1.00 53.64 O
ATOM 9 C3' G B2226 59.530 60.279 64.763 1.00 55.57 C
ATOM 10 O3' G B2226 58.251 60.809 64.435 1.00 56.01 O
ATOM 11 C2' G B2226 59.467 58.893 65.394 1.00 55.61 C
ATOM 12 O2' G B2226 58.490 58.073 64.783 1.00 59.13 O
ATOM 13 C1' G B2226 60.849 58.334 65.040 1.00 53.58 C
ATOM 14 N9 G B2226 61.857 58.422 66.097 1.00 51.89 N
ATOM 15 C8 G B2226 63.081 59.044 66.030 1.00 51.92 C
ATOM 16 N7 G B2226 63.784 58.912 67.124 1.00 51.74 N
ATOM 17 C5 G B2226 62.972 58.168 67.970 1.00 50.98 C
ATOM 18 C6 G B2226 63.197 57.707 69.298 1.00 50.07 C
ATOM 19 O6 G B2226 64.195 57.858 70.009 1.00 48.93 O
ATOM 20 N1 G B2226 62.106 56.997 69.784 1.00 49.86 N
ATOM 21 C2 G B2226 60.952 56.750 69.085 1.00 50.29 C
ATOM 22 N2 G B2226 60.013 56.036 69.721 1.00 49.95 N
ATOM 23 N3 G B2226 60.732 57.167 67.851 1.00 51.45 N
ATOM 24 C4 G B2226 61.776 57.865 67.357 1.00 51.48 C
ATOM 25 P U B2227 57.603 61.954 65.357 1.00 58.27 P
ATOM 26 OP1 U B2227 56.426 62.495 64.624 1.00 56.70 O
ATOM 27 OP2 U B2227 58.683 62.876 65.818 1.00 56.60 O
ATOM 28 O5' U B2227 57.048 61.150 66.610 1.00 57.24 O
TER
ATOM 2 P G A 725 57.234 51.788 58.331 1.00 83.11 P
ATOM 3 OP1 G A 725 56.066 51.150 58.988 1.00 83.37 O
ATOM 4 OP2 G A 725 57.210 52.024 56.867 1.00 83.77 O
ATOM 5 O5' G A 725 57.507 53.174 59.064 1.00 82.12 O
ATOM 6 C5' G A 725 57.856 53.210 60.464 1.00 78.84 C
ATOM 7 C4' G A 725 58.563 54.505 60.805 1.00 75.82 C
ATOM 8 O4' G A 725 59.788 54.609 60.029 1.00 75.26 O
ATOM 9 C3' G A 725 57.823 55.792 60.478 1.00 72.52 C
ATOM 10 O3' G A 725 56.839 56.129 61.450 1.00 70.66 O
ATOM 11 C2' G A 725 58.965 56.792 60.419 1.00 72.12 C
ATOM 12 O2' G A 725 59.447 57.139 61.701 1.00 70.27 O
ATOM 13 C1' G A 725 60.025 55.967 59.690 1.00 73.20 C
ATOM 14 N9 G A 725 59.901 56.110 58.240 1.00 73.30 N
ATOM 15 C8 G A 725 59.203 55.300 57.376 1.00 73.13 C
ATOM 16 N7 G A 725 59.239 55.718 56.140 1.00 73.24 N
ATOM 17 C5 G A 725 60.015 56.867 56.190 1.00 73.52 C
ATOM 18 C6 G A 725 60.398 57.761 55.162 1.00 73.43 C
ATOM 19 O6 G A 725 60.121 57.716 53.958 1.00 74.01 O
ATOM 20 N1 G A 725 61.184 58.795 55.653 1.00 73.02 N
ATOM 21 C2 G A 725 61.562 58.947 56.961 1.00 73.23 C
ATOM 22 N2 G A 725 62.336 60.005 57.240 1.00 73.65 N
ATOM 23 N3 G A 725 61.213 58.124 57.927 1.00 73.92 N
ATOM 24 C4 G A 725 60.442 57.115 57.475 1.00 73.50 C
ATOM 25 P G A 726 55.744 57.258 61.111 1.00 68.33 P
ATOM 26 OP1 G A 726 54.602 57.125 62.053 1.00 67.75 O
ATOM 27 OP2 G A 726 55.494 57.242 59.646 1.00 66.72 O
ATOM 28 O5' G A 726 56.498 58.608 61.483 1.00 66.62 O
TER
ATOM 1 O3' U B2225 63.596 60.713 60.166 1.00 56.00 O
ATOM 2 P G B2226 62.817 61.738 61.121 1.00 55.21 P
ATOM 3 OP1 G B2226 62.178 62.775 60.281 1.00 56.02 O
ATOM 4 OP2 G B2226 63.736 62.140 62.220 1.00 54.70 O
ATOM 5 O5' G B2226 61.658 60.836 61.715 1.00 54.31 O
ATOM 6 C5' G B2226 60.967 61.214 62.897 1.00 55.26 C
ATOM 7 C4' G B2226 60.306 60.007 63.496 1.00 55.31 C
ATOM 8 O4' G B2226 61.308 59.036 63.897 1.00 53.64 O
ATOM 9 C3' G B2226 59.530 60.279 64.763 1.00 55.57 C
ATOM 10 O3' G B2226 58.251 60.809 64.435 1.00 56.01 O
ATOM 11 C2' G B2226 59.467 58.893 65.394 1.00 55.61 C
ATOM 12 O2' G B2226 58.490 58.073 64.783 1.00 59.13 O
ATOM 13 C1' G B2226 60.849 58.334 65.040 1.00 53.58 C
ATOM 14 N9 G B2226 61.857 58.422 66.097 1.00 51.89 N
ATOM 15 C8 G B2226 63.081 59.044 66.030 1.00 51.92 C
ATOM 16 N7 G B2226 63.784 58.912 67.124 1.00 51.74 N
ATOM 17 C5 G B2226 62.972 58.168 67.970 1.00 50.98 C
ATOM 18 C6 G B2226 63.197 57.707 69.298 1.00 50.07 C
ATOM 19 O6 G B2226 64.195 57.858 70.009 1.00 48.93 O
ATOM 20 N1 G B2226 62.106 56.997 69.784 1.00 49.86 N
ATOM 21 C2 G B2226 60.952 56.750 69.085 1.00 50.29 C
ATOM 22 N2 G B2226 60.013 56.036 69.721 1.00 49.95 N
ATOM 23 N3 G B2226 60.732 57.167 67.851 1.00 51.45 N
ATOM 24 C4 G B2226 61.776 57.865 67.357 1.00 51.48 C
ATOM 25 P U B2227 57.603 61.954 65.357 1.00 58.27 P
ATOM 26 OP1 U B2227 56.426 62.495 64.624 1.00 56.70 O
ATOM 27 OP2 U B2227 58.683 62.876 65.818 1.00 56.60 O
ATOM 28 O5' U B2227 57.048 61.150 66.610 1.00 57.24 O
TER
Atoms:
OP1: (56.066,51.150,58.988)
OP2: (57.210,52.024,56.867)
C3': (57.823,55.792,60.478)
C1': (60.025,55.967,59.690)
C5': (57.856,53.210,60.464)
O6: (60.121,57.716,53.958)
O4': (59.788,54.609,60.029)
C8: (59.203,55.300,57.376)
C2: (61.562,58.947,56.961)
C6: (60.398,57.761,55.162)
C5: (60.015,56.867,56.190)
C4: (60.442,57.115,57.475)
P: (57.234,51.788,58.331)
C4': (58.563,54.505,60.805)
C2': (58.965,56.792,60.419)
O2': (59.447,57.139,61.701)
N1: (61.184,58.795,55.653)
N2: (62.336,60.005,57.240)
N3: (61.213,58.124,57.927)
N7: (59.239,55.718,56.140)
N9: (59.901,56.110,58.240)
O5': (57.507,53.174,59.064)
O3': (56.839,56.129,61.450)
OP2: (57.210,52.024,56.867)
C3': (57.823,55.792,60.478)
C1': (60.025,55.967,59.690)
C5': (57.856,53.210,60.464)
O6: (60.121,57.716,53.958)
O4': (59.788,54.609,60.029)
C8: (59.203,55.300,57.376)
C2: (61.562,58.947,56.961)
C6: (60.398,57.761,55.162)
C5: (60.015,56.867,56.190)
C4: (60.442,57.115,57.475)
P: (57.234,51.788,58.331)
C4': (58.563,54.505,60.805)
C2': (58.965,56.792,60.419)
O2': (59.447,57.139,61.701)
N1: (61.184,58.795,55.653)
N2: (62.336,60.005,57.240)
N3: (61.213,58.124,57.927)
N7: (59.239,55.718,56.140)
N9: (59.901,56.110,58.240)
O5': (57.507,53.174,59.064)
O3': (56.839,56.129,61.450)
OP1: (62.178,62.775,60.281)
OP2: (63.736,62.140,62.220)
C3': (59.530,60.279,64.763)
C1': (60.849,58.334,65.040)
C5': (60.967,61.214,62.897)
O6: (64.195,57.858,70.009)
O4': (61.308,59.036,63.897)
C8: (63.081,59.044,66.030)
C2: (60.952,56.750,69.085)
C6: (63.197,57.707,69.298)
C5: (62.972,58.168,67.970)
C4: (61.776,57.865,67.357)
P: (62.817,61.738,61.121)
C4': (60.306,60.007,63.496)
C2': (59.467,58.893,65.394)
O2': (58.490,58.073,64.783)
N1: (62.106,56.997,69.784)
N2: (60.013,56.036,69.721)
N3: (60.732,57.167,67.851)
N7: (63.784,58.912,67.124)
N9: (61.857,58.422,66.097)
O5': (61.658,60.836,61.715)
O3': (58.251,60.809,64.435)
OP2: (63.736,62.140,62.220)
C3': (59.530,60.279,64.763)
C1': (60.849,58.334,65.040)
C5': (60.967,61.214,62.897)
O6: (64.195,57.858,70.009)
O4': (61.308,59.036,63.897)
C8: (63.081,59.044,66.030)
C2: (60.952,56.750,69.085)
C6: (63.197,57.707,69.298)
C5: (62.972,58.168,67.970)
C4: (61.776,57.865,67.357)
P: (62.817,61.738,61.121)
C4': (60.306,60.007,63.496)
C2': (59.467,58.893,65.394)
O2': (58.490,58.073,64.783)
N1: (62.106,56.997,69.784)
N2: (60.013,56.036,69.721)
N3: (60.732,57.167,67.851)
N7: (63.784,58.912,67.124)
N9: (61.857,58.422,66.097)
O5': (61.658,60.836,61.715)
O3': (58.251,60.809,64.435)
Image (generated by PyMOL):