ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01090:01091

Extra

PDB:
ATOM 1 O3' U A1089 45.483 100.174 126.152 1.00 70.50 O
ATOM 2 P G A1090 44.973 100.294 127.681 1.00 69.78 P
ATOM 3 OP1 G A1090 43.668 99.577 127.731 1.00 69.23 O
ATOM 4 OP2 G A1090 45.063 101.702 128.151 1.00 67.65 O
ATOM 5 O5' G A1090 46.044 99.458 128.516 1.00 66.35 O
ATOM 6 C5' G A1090 46.707 98.329 127.920 1.00 57.41 C
ATOM 7 C4' G A1090 48.197 98.411 128.147 1.00 51.03 C
ATOM 8 O4' G A1090 48.634 99.780 127.965 1.00 47.16 O
ATOM 9 C3' G A1090 48.686 98.138 129.556 1.00 48.24 C
ATOM 10 O3' G A1090 48.709 96.736 129.804 1.00 46.43 O
ATOM 11 C2' G A1090 50.095 98.726 129.506 1.00 47.67 C
ATOM 12 O2' G A1090 51.013 97.868 128.859 1.00 44.16 O
ATOM 13 C1' G A1090 49.882 99.946 128.607 1.00 45.96 C
ATOM 14 N9 G A1090 49.921 101.256 129.257 1.00 44.77 N
ATOM 15 C8 G A1090 48.918 102.196 129.298 1.00 45.15 C
ATOM 16 N7 G A1090 49.280 103.311 129.880 1.00 43.63 N
ATOM 17 C5 G A1090 50.594 103.090 130.264 1.00 42.89 C
ATOM 18 C6 G A1090 51.513 103.945 130.929 1.00 43.33 C
ATOM 19 O6 G A1090 51.342 105.114 131.314 1.00 42.13 O
ATOM 20 N1 G A1090 52.741 103.313 131.136 1.00 43.16 N
ATOM 21 C2 G A1090 53.045 102.025 130.751 1.00 42.29 C
ATOM 22 N2 G A1090 54.281 101.590 131.042 1.00 41.35 N
ATOM 23 N3 G A1090 52.197 101.223 130.126 1.00 42.35 N
ATOM 24 C4 G A1090 51.001 101.816 129.913 1.00 43.70 C
ATOM 25 P A A1091 48.978 96.185 131.290 1.00 44.54 P
ATOM 26 OP1 A A1091 48.037 95.060 131.523 1.00 45.20 O
ATOM 27 OP2 A A1091 49.002 97.328 132.236 1.00 43.89 O
ATOM 28 O5' A A1091 50.447 95.582 131.195 1.00 44.13 O
TER

ATOM 1 O3' G B1090 48.709 96.736 129.804 1.00 46.43 O
ATOM 2 P A B1091 48.978 96.185 131.290 1.00 44.54 P
ATOM 3 OP1 A B1091 48.037 95.060 131.523 1.00 45.20 O
ATOM 4 OP2 A B1091 49.002 97.328 132.236 1.00 43.89 O
ATOM 5 O5' A B1091 50.447 95.582 131.195 1.00 44.13 O
ATOM 6 C5' A B1091 50.836 94.755 130.081 1.00 42.33 C
ATOM 7 C4' A B1091 52.309 94.455 130.156 1.00 42.77 C
ATOM 8 O4' A B1091 53.063 95.682 129.999 1.00 44.49 O
ATOM 9 C3' A B1091 52.750 93.900 131.495 1.00 43.59 C
ATOM 10 O3' A B1091 52.540 92.495 131.518 1.00 43.63 O
ATOM 11 C2' A B1091 54.215 94.319 131.572 1.00 43.08 C
ATOM 12 O2' A B1091 55.078 93.476 130.835 1.00 41.31 O
ATOM 13 C1' A B1091 54.168 95.687 130.889 1.00 43.09 C
ATOM 14 N9 A B1091 54.018 96.840 131.781 1.00 42.76 N
ATOM 15 C8 A B1091 52.855 97.502 132.099 1.00 42.06 C
ATOM 16 N7 A B1091 53.035 98.544 132.873 1.00 42.60 N
ATOM 17 C5 A B1091 54.406 98.563 133.094 1.00 41.18 C
ATOM 18 C6 A B1091 55.233 99.432 133.826 1.00 41.01 C
ATOM 19 N6 A B1091 54.777 100.486 134.508 1.00 41.51 N
ATOM 20 N1 A B1091 56.560 99.179 133.836 1.00 39.80 N
ATOM 21 C2 A B1091 57.013 98.118 133.162 1.00 40.70 C
ATOM 22 N3 A B1091 56.336 97.226 132.441 1.00 42.37 N
ATOM 23 C4 A B1091 55.022 97.511 132.442 1.00 41.80 C
ATOM 24 P A B1092 52.230 91.758 132.906 1.00 44.66 P
ATOM 25 OP1 A B1092 51.663 90.428 132.551 1.00 46.03 O
ATOM 26 OP2 A B1092 51.474 92.671 133.806 1.00 43.25 O
ATOM 27 O5' A B1092 53.671 91.520 133.528 1.00 43.92 O
TER

Atoms:
OP1: (43.668,99.577,127.731)
OP2: (45.063,101.702,128.151)
C3': (48.686,98.138,129.556)
C1': (49.882,99.946,128.607)
C5': (46.707,98.329,127.920)
O6: (51.342,105.114,131.314)
O4': (48.634,99.780,127.965)
C8: (48.918,102.196,129.298)
C2: (53.045,102.025,130.751)
C6: (51.513,103.945,130.929)
C5: (50.594,103.090,130.264)
C4: (51.001,101.816,129.913)
P: (44.973,100.294,127.681)
C4': (48.197,98.411,128.147)
C2': (50.095,98.726,129.506)
O2': (51.013,97.868,128.859)
N1: (52.741,103.313,131.136)
N2: (54.281,101.590,131.042)
N3: (52.197,101.223,130.126)
N7: (49.280,103.311,129.880)
N9: (49.921,101.256,129.257)
O5': (46.044,99.458,128.516)
O3': (48.709,96.736,129.804)
OP1: (48.037,95.060,131.523)
OP2: (49.002,97.328,132.236)
C3': (52.750,93.900,131.495)
C1': (54.168,95.687,130.889)
C5': (50.836,94.755,130.081)
O4': (53.063,95.682,129.999)
C8: (52.855,97.502,132.099)
O2': (55.078,93.476,130.835)
C6: (55.233,99.432,133.826)
C5: (54.406,98.563,133.094)
C4: (55.022,97.511,132.442)
P: (48.978,96.185,131.290)
C4': (52.309,94.455,130.156)
C2': (54.215,94.319,131.572)
C2: (57.013,98.118,133.162)
N1: (56.560,99.179,133.836)
N3: (56.336,97.226,132.441)
N6: (54.777,100.486,134.508)
N7: (53.035,98.544,132.873)
N9: (54.018,96.840,131.781)
O5': (50.447,95.582,131.195)
O3': (52.540,92.495,131.518)
Image (generated by PyMOL):
PyMOL image
show in jmol