Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01090:01091
Extra
PDB:
ATOM 1 O3' U A1089 45.376 100.095 126.203 1.00 76.95 O
ATOM 2 P G A1090 45.009 100.291 127.760 1.00 75.07 P
ATOM 3 OP1 G A1090 43.707 99.604 127.967 1.00 75.25 O
ATOM 4 OP2 G A1090 45.158 101.725 128.133 1.00 74.07 O
ATOM 5 O5' G A1090 46.154 99.495 128.526 1.00 70.64 O
ATOM 6 C5' G A1090 46.786 98.363 127.907 1.00 62.72 C
ATOM 7 C4' G A1090 48.277 98.401 128.132 1.00 55.83 C
ATOM 8 O4' G A1090 48.742 99.759 127.967 1.00 53.36 O
ATOM 9 C3' G A1090 48.756 98.104 129.538 1.00 52.35 C
ATOM 10 O3' G A1090 48.762 96.704 129.766 1.00 49.26 O
ATOM 11 C2' G A1090 50.174 98.656 129.499 1.00 52.46 C
ATOM 12 O2' G A1090 51.061 97.773 128.846 1.00 49.96 O
ATOM 13 C1' G A1090 49.992 99.885 128.608 1.00 53.18 C
ATOM 14 N9 G A1090 50.067 101.191 129.259 1.00 54.11 N
ATOM 15 C8 G A1090 49.097 102.163 129.279 1.00 54.96 C
ATOM 16 N7 G A1090 49.491 103.270 129.852 1.00 55.41 N
ATOM 17 C5 G A1090 50.792 103.008 130.255 1.00 54.07 C
ATOM 18 C6 G A1090 51.732 103.840 130.914 1.00 53.65 C
ATOM 19 O6 G A1090 51.602 105.021 131.266 1.00 52.33 O
ATOM 20 N1 G A1090 52.930 103.168 131.151 1.00 53.85 N
ATOM 21 C2 G A1090 53.193 101.865 130.789 1.00 53.77 C
ATOM 22 N2 G A1090 54.410 101.390 131.105 1.00 53.59 N
ATOM 23 N3 G A1090 52.328 101.085 130.163 1.00 53.57 N
ATOM 24 C4 G A1090 51.155 101.718 129.927 1.00 54.22 C
ATOM 25 P A A1091 49.012 96.134 131.243 1.00 46.44 P
ATOM 26 OP1 A A1091 48.075 94.994 131.426 1.00 45.09 O
ATOM 27 OP2 A A1091 49.016 97.252 132.222 1.00 44.87 O
ATOM 28 O5' A A1091 50.485 95.555 131.157 1.00 43.58 O
TER
ATOM 1 O3' G B1090 48.762 96.704 129.766 1.00 49.26 O
ATOM 2 P A B1091 49.012 96.134 131.243 1.00 46.44 P
ATOM 3 OP1 A B1091 48.075 94.994 131.426 1.00 45.09 O
ATOM 4 OP2 A B1091 49.016 97.252 132.222 1.00 44.87 O
ATOM 5 O5' A B1091 50.485 95.555 131.157 1.00 43.58 O
ATOM 6 C5' A B1091 50.849 94.667 130.102 1.00 42.83 C
ATOM 7 C4' A B1091 52.324 94.411 130.148 1.00 43.24 C
ATOM 8 O4' A B1091 53.020 95.667 129.987 1.00 42.71 O
ATOM 9 C3' A B1091 52.811 93.871 131.477 1.00 42.97 C
ATOM 10 O3' A B1091 52.653 92.461 131.499 1.00 43.06 O
ATOM 11 C2' A B1091 54.265 94.319 131.500 1.00 43.50 C
ATOM 12 O2' A B1091 55.114 93.499 130.718 1.00 42.71 O
ATOM 13 C1' A B1091 54.157 95.690 130.828 1.00 42.73 C
ATOM 14 N9 A B1091 54.016 96.823 131.742 1.00 40.79 N
ATOM 15 C8 A B1091 52.868 97.489 132.096 1.00 40.60 C
ATOM 16 N7 A B1091 53.075 98.508 132.894 1.00 39.72 N
ATOM 17 C5 A B1091 54.448 98.505 133.090 1.00 39.22 C
ATOM 18 C6 A B1091 55.297 99.338 133.829 1.00 38.55 C
ATOM 19 N6 A B1091 54.874 100.384 134.536 1.00 37.46 N
ATOM 20 N1 A B1091 56.620 99.058 133.816 1.00 39.21 N
ATOM 21 C2 A B1091 57.046 98.009 133.106 1.00 38.79 C
ATOM 22 N3 A B1091 56.346 97.155 132.369 1.00 39.86 N
ATOM 23 C4 A B1091 55.038 97.462 132.400 1.00 40.22 C
ATOM 24 P A B1092 52.255 91.719 132.862 1.00 45.04 P
ATOM 25 OP1 A B1092 51.657 90.428 132.437 1.00 44.72 O
ATOM 26 OP2 A B1092 51.495 92.624 133.772 1.00 43.10 O
ATOM 27 O5' A B1092 53.661 91.394 133.523 1.00 43.11 O
TER
ATOM 2 P G A1090 45.009 100.291 127.760 1.00 75.07 P
ATOM 3 OP1 G A1090 43.707 99.604 127.967 1.00 75.25 O
ATOM 4 OP2 G A1090 45.158 101.725 128.133 1.00 74.07 O
ATOM 5 O5' G A1090 46.154 99.495 128.526 1.00 70.64 O
ATOM 6 C5' G A1090 46.786 98.363 127.907 1.00 62.72 C
ATOM 7 C4' G A1090 48.277 98.401 128.132 1.00 55.83 C
ATOM 8 O4' G A1090 48.742 99.759 127.967 1.00 53.36 O
ATOM 9 C3' G A1090 48.756 98.104 129.538 1.00 52.35 C
ATOM 10 O3' G A1090 48.762 96.704 129.766 1.00 49.26 O
ATOM 11 C2' G A1090 50.174 98.656 129.499 1.00 52.46 C
ATOM 12 O2' G A1090 51.061 97.773 128.846 1.00 49.96 O
ATOM 13 C1' G A1090 49.992 99.885 128.608 1.00 53.18 C
ATOM 14 N9 G A1090 50.067 101.191 129.259 1.00 54.11 N
ATOM 15 C8 G A1090 49.097 102.163 129.279 1.00 54.96 C
ATOM 16 N7 G A1090 49.491 103.270 129.852 1.00 55.41 N
ATOM 17 C5 G A1090 50.792 103.008 130.255 1.00 54.07 C
ATOM 18 C6 G A1090 51.732 103.840 130.914 1.00 53.65 C
ATOM 19 O6 G A1090 51.602 105.021 131.266 1.00 52.33 O
ATOM 20 N1 G A1090 52.930 103.168 131.151 1.00 53.85 N
ATOM 21 C2 G A1090 53.193 101.865 130.789 1.00 53.77 C
ATOM 22 N2 G A1090 54.410 101.390 131.105 1.00 53.59 N
ATOM 23 N3 G A1090 52.328 101.085 130.163 1.00 53.57 N
ATOM 24 C4 G A1090 51.155 101.718 129.927 1.00 54.22 C
ATOM 25 P A A1091 49.012 96.134 131.243 1.00 46.44 P
ATOM 26 OP1 A A1091 48.075 94.994 131.426 1.00 45.09 O
ATOM 27 OP2 A A1091 49.016 97.252 132.222 1.00 44.87 O
ATOM 28 O5' A A1091 50.485 95.555 131.157 1.00 43.58 O
TER
ATOM 1 O3' G B1090 48.762 96.704 129.766 1.00 49.26 O
ATOM 2 P A B1091 49.012 96.134 131.243 1.00 46.44 P
ATOM 3 OP1 A B1091 48.075 94.994 131.426 1.00 45.09 O
ATOM 4 OP2 A B1091 49.016 97.252 132.222 1.00 44.87 O
ATOM 5 O5' A B1091 50.485 95.555 131.157 1.00 43.58 O
ATOM 6 C5' A B1091 50.849 94.667 130.102 1.00 42.83 C
ATOM 7 C4' A B1091 52.324 94.411 130.148 1.00 43.24 C
ATOM 8 O4' A B1091 53.020 95.667 129.987 1.00 42.71 O
ATOM 9 C3' A B1091 52.811 93.871 131.477 1.00 42.97 C
ATOM 10 O3' A B1091 52.653 92.461 131.499 1.00 43.06 O
ATOM 11 C2' A B1091 54.265 94.319 131.500 1.00 43.50 C
ATOM 12 O2' A B1091 55.114 93.499 130.718 1.00 42.71 O
ATOM 13 C1' A B1091 54.157 95.690 130.828 1.00 42.73 C
ATOM 14 N9 A B1091 54.016 96.823 131.742 1.00 40.79 N
ATOM 15 C8 A B1091 52.868 97.489 132.096 1.00 40.60 C
ATOM 16 N7 A B1091 53.075 98.508 132.894 1.00 39.72 N
ATOM 17 C5 A B1091 54.448 98.505 133.090 1.00 39.22 C
ATOM 18 C6 A B1091 55.297 99.338 133.829 1.00 38.55 C
ATOM 19 N6 A B1091 54.874 100.384 134.536 1.00 37.46 N
ATOM 20 N1 A B1091 56.620 99.058 133.816 1.00 39.21 N
ATOM 21 C2 A B1091 57.046 98.009 133.106 1.00 38.79 C
ATOM 22 N3 A B1091 56.346 97.155 132.369 1.00 39.86 N
ATOM 23 C4 A B1091 55.038 97.462 132.400 1.00 40.22 C
ATOM 24 P A B1092 52.255 91.719 132.862 1.00 45.04 P
ATOM 25 OP1 A B1092 51.657 90.428 132.437 1.00 44.72 O
ATOM 26 OP2 A B1092 51.495 92.624 133.772 1.00 43.10 O
ATOM 27 O5' A B1092 53.661 91.394 133.523 1.00 43.11 O
TER
Atoms:
OP1: (43.707,99.604,127.967)
OP2: (45.158,101.725,128.133)
C3': (48.756,98.104,129.538)
C1': (49.992,99.885,128.608)
C5': (46.786,98.363,127.907)
O6: (51.602,105.021,131.266)
O4': (48.742,99.759,127.967)
C8: (49.097,102.163,129.279)
C2: (53.193,101.865,130.789)
C6: (51.732,103.840,130.914)
C5: (50.792,103.008,130.255)
C4: (51.155,101.718,129.927)
P: (45.009,100.291,127.760)
C4': (48.277,98.401,128.132)
C2': (50.174,98.656,129.499)
O2': (51.061,97.773,128.846)
N1: (52.930,103.168,131.151)
N2: (54.410,101.390,131.105)
N3: (52.328,101.085,130.163)
N7: (49.491,103.270,129.852)
N9: (50.067,101.191,129.259)
O5': (46.154,99.495,128.526)
O3': (48.762,96.704,129.766)
OP2: (45.158,101.725,128.133)
C3': (48.756,98.104,129.538)
C1': (49.992,99.885,128.608)
C5': (46.786,98.363,127.907)
O6: (51.602,105.021,131.266)
O4': (48.742,99.759,127.967)
C8: (49.097,102.163,129.279)
C2: (53.193,101.865,130.789)
C6: (51.732,103.840,130.914)
C5: (50.792,103.008,130.255)
C4: (51.155,101.718,129.927)
P: (45.009,100.291,127.760)
C4': (48.277,98.401,128.132)
C2': (50.174,98.656,129.499)
O2': (51.061,97.773,128.846)
N1: (52.930,103.168,131.151)
N2: (54.410,101.390,131.105)
N3: (52.328,101.085,130.163)
N7: (49.491,103.270,129.852)
N9: (50.067,101.191,129.259)
O5': (46.154,99.495,128.526)
O3': (48.762,96.704,129.766)
OP1: (48.075,94.994,131.426)
OP2: (49.016,97.252,132.222)
C3': (52.811,93.871,131.477)
C1': (54.157,95.690,130.828)
C5': (50.849,94.667,130.102)
O4': (53.020,95.667,129.987)
C8: (52.868,97.489,132.096)
O2': (55.114,93.499,130.718)
C6: (55.297,99.338,133.829)
C5: (54.448,98.505,133.090)
C4: (55.038,97.462,132.400)
P: (49.012,96.134,131.243)
C4': (52.324,94.411,130.148)
C2': (54.265,94.319,131.500)
C2: (57.046,98.009,133.106)
N1: (56.620,99.058,133.816)
N3: (56.346,97.155,132.369)
N6: (54.874,100.384,134.536)
N7: (53.075,98.508,132.894)
N9: (54.016,96.823,131.742)
O5': (50.485,95.555,131.157)
O3': (52.653,92.461,131.499)
OP2: (49.016,97.252,132.222)
C3': (52.811,93.871,131.477)
C1': (54.157,95.690,130.828)
C5': (50.849,94.667,130.102)
O4': (53.020,95.667,129.987)
C8: (52.868,97.489,132.096)
O2': (55.114,93.499,130.718)
C6: (55.297,99.338,133.829)
C5: (54.448,98.505,133.090)
C4: (55.038,97.462,132.400)
P: (49.012,96.134,131.243)
C4': (52.324,94.411,130.148)
C2': (54.265,94.319,131.500)
C2: (57.046,98.009,133.106)
N1: (56.620,99.058,133.816)
N3: (56.346,97.155,132.369)
N6: (54.874,100.384,134.536)
N7: (53.075,98.508,132.894)
N9: (54.016,96.823,131.742)
O5': (50.485,95.555,131.157)
O3': (52.653,92.461,131.499)
Image (generated by PyMOL):