ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNK:A1033:A1034

Extra

PDB:
ATOM 1 O3' U A1032 43.041-101.517 126.610 1.00126.48 O
ATOM 2 P A A1033 42.838-100.230 127.561 1.00130.90 P
ATOM 3 OP1 A A1033 41.895 -99.278 126.904 1.00111.03 O
ATOM 4 OP2 A A1033 44.213 -99.773 127.921 1.00118.21 O
ATOM 5 O5' A A1033 42.166-100.774 128.909 1.00115.96 O
ATOM 6 C5' A A1033 41.339-101.944 128.946 1.00113.34 C
ATOM 7 C4' A A1033 40.965-102.246 130.382 1.00110.70 C
ATOM 8 O4' A A1033 42.188-102.356 131.140 1.00103.69 O
ATOM 9 C3' A A1033 40.147-101.132 131.033 1.00103.20 C
ATOM 10 O3' A A1033 38.783-101.542 130.950 1.00 98.42 O
ATOM 11 C2' A A1033 40.658-101.082 132.469 1.00 94.98 C
ATOM 12 O2' A A1033 39.945-101.914 133.345 1.00 86.40 O
ATOM 13 C1' A A1033 42.083-101.620 132.334 1.00 92.68 C
ATOM 14 N9 A A1033 43.129-100.612 132.315 1.00 93.21 N
ATOM 15 C8 A A1033 44.056-100.384 131.326 1.00 96.60 C
ATOM 16 N7 A A1033 44.887 -99.415 131.600 1.00 98.75 N
ATOM 17 C5 A A1033 44.479 -98.971 132.849 1.00 95.74 C
ATOM 18 C6 A A1033 44.958 -97.962 133.685 1.00 91.79 C
ATOM 19 N6 A A1033 46.000 -97.192 133.367 1.00 92.15 N
ATOM 20 N1 A A1033 44.328 -97.763 134.867 1.00 88.55 N
ATOM 21 C2 A A1033 43.288 -98.544 135.174 1.00 90.13 C
ATOM 22 N3 A A1033 42.745 -99.535 134.466 1.00 96.92 N
ATOM 23 C4 A A1033 43.396 -99.697 133.299 1.00 96.50 C
ATOM 24 P A A1034 37.594-100.555 131.387 1.00 96.14 P
ATOM 25 OP1 A A1034 36.378-101.205 130.844 1.00104.24 O
ATOM 26 OP2 A A1034 37.883 -99.135 131.053 1.00 97.45 O
ATOM 27 O5' A A1034 37.547-100.670 132.976 1.00 89.17 O
TER

ATOM 1 O3' A B1033 38.783-101.542 130.950 1.00 98.42 O
ATOM 2 P A B1034 37.594-100.555 131.387 1.00 96.14 P
ATOM 3 OP1 A B1034 36.378-101.205 130.844 1.00104.24 O
ATOM 4 OP2 A B1034 37.883 -99.135 131.053 1.00 97.45 O
ATOM 5 O5' A B1034 37.547-100.670 132.976 1.00 89.17 O
ATOM 6 C5' A B1034 36.862-101.742 133.607 1.00 93.04 C
ATOM 7 C4' A B1034 36.515-101.372 135.023 1.00 88.73 C
ATOM 8 O4' A B1034 37.732-101.108 135.760 1.00 92.13 O
ATOM 9 C3' A B1034 35.669-100.120 135.201 1.00 86.83 C
ATOM 10 O3' A B1034 34.306-100.496 135.066 1.00 89.71 O
ATOM 11 C2' A B1034 36.030 -99.683 136.618 1.00 89.72 C
ATOM 12 O2' A B1034 35.362-100.439 137.607 1.00 92.62 O
ATOM 13 C1' A B1034 37.504-100.080 136.706 1.00 88.93 C
ATOM 14 N9 A B1034 38.479 -99.014 136.468 1.00 90.47 N
ATOM 15 C8 A B1034 39.059 -98.666 135.270 1.00 92.68 C
ATOM 16 N7 A B1034 39.956 -97.712 135.372 1.00 88.67 N
ATOM 17 C5 A B1034 39.960 -97.401 136.724 1.00 87.25 C
ATOM 18 C6 A B1034 40.708 -96.478 137.482 1.00 90.69 C
ATOM 19 N6 A B1034 41.666 -95.693 136.971 1.00 97.88 N
ATOM 20 N1 A B1034 40.447 -96.398 138.804 1.00 89.37 N
ATOM 21 C2 A B1034 39.520 -97.209 139.323 1.00 89.22 C
ATOM 22 N3 A B1034 38.772 -98.131 138.724 1.00 88.73 N
ATOM 23 C4 A B1034 39.040 -98.180 137.409 1.00 88.02 C
ATOM 24 P A B1035 33.159 -99.380 134.995 1.00 84.13 P
ATOM 25 OP1 A B1035 31.954-100.119 134.567 1.00 90.14 O
ATOM 26 OP2 A B1035 33.650 -98.247 134.174 1.00 80.79 O
ATOM 27 O5' A B1035 32.930 -98.941 136.511 1.00 83.62 O
TER

Atoms:
OP1: (41.895,-99.278,126.904)
OP2: (44.213,-99.773,127.921)
C3': (40.147,-101.132,131.033)
C1': (42.083,-101.620,132.334)
C5': (41.339,-101.944,128.946)
O4': (42.188,-102.356,131.140)
C8: (44.056,-100.384,131.326)
O2': (39.945,-101.914,133.345)
C6: (44.958,-97.962,133.685)
C5: (44.479,-98.971,132.849)
C4: (43.396,-99.697,133.299)
P: (42.838,-100.230,127.561)
C4': (40.965,-102.246,130.382)
C2': (40.658,-101.082,132.469)
C2: (43.288,-98.544,135.174)
N1: (44.328,-97.763,134.867)
N3: (42.745,-99.535,134.466)
N6: (46.000,-97.192,133.367)
N7: (44.887,-99.415,131.600)
N9: (43.129,-100.612,132.315)
O5': (42.166,-100.774,128.909)
O3': (38.783,-101.542,130.950)
OP1: (36.378,-101.205,130.844)
OP2: (37.883,-99.135,131.053)
C3': (35.669,-100.120,135.201)
C1': (37.504,-100.080,136.706)
C5': (36.862,-101.742,133.607)
O4': (37.732,-101.108,135.760)
C8: (39.059,-98.666,135.270)
O2': (35.362,-100.439,137.607)
C6: (40.708,-96.478,137.482)
C5: (39.960,-97.401,136.724)
C4: (39.040,-98.180,137.409)
P: (37.594,-100.555,131.387)
C4': (36.515,-101.372,135.023)
C2': (36.030,-99.683,136.618)
C2: (39.520,-97.209,139.323)
N1: (40.447,-96.398,138.804)
N3: (38.772,-98.131,138.724)
N6: (41.666,-95.693,136.971)
N7: (39.956,-97.712,135.372)
N9: (38.479,-99.014,136.468)
O5': (37.547,-100.670,132.976)
O3': (34.306,-100.496,135.066)
Image (generated by PyMOL):
PyMOL image
show in jmol