ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1028:A1029

Extra

PDB:
ATOM 1 O3' U A1027 116.542 -76.219 12.440 1.00142.44 O
ATOM 2 P A A1028 116.217 -74.896 13.266 1.00122.64 P
ATOM 3 OP1 A A1028 116.136 -75.286 14.683 1.00107.85 O
ATOM 4 OP2 A A1028 115.023 -74.277 12.625 1.00116.64 O
ATOM 5 O5' A A1028 117.510 -73.990 13.034 1.00 80.09 O
ATOM 6 C5' A A1028 117.830 -73.457 11.750 1.00 84.30 C
ATOM 7 C4' A A1028 117.838 -71.936 11.740 1.00 63.71 C
ATOM 8 O4' A A1028 116.520 -71.440 12.021 1.00 58.25 O
ATOM 9 C3' A A1028 118.715 -71.244 12.772 1.00 70.87 C
ATOM 10 O3' A A1028 120.067 -71.161 12.368 1.00 82.51 O
ATOM 11 C2' A A1028 118.058 -69.874 12.933 1.00 64.48 C
ATOM 12 O2' A A1028 118.570 -68.962 11.980 1.00 57.09 O
ATOM 13 C1' A A1028 116.602 -70.159 12.578 1.00 56.44 C
ATOM 14 N9 A A1028 115.688 -70.074 13.724 1.00 50.16 N
ATOM 15 C8 A A1028 114.814 -71.034 14.130 1.00 54.60 C
ATOM 16 N7 A A1028 114.048 -70.673 15.128 1.00 47.16 N
ATOM 17 C5 A A1028 114.437 -69.381 15.388 1.00 41.45 C
ATOM 18 C6 A A1028 113.999 -68.464 16.348 1.00 43.53 C
ATOM 19 N6 A A1028 113.054 -68.758 17.238 1.00 45.49 N
ATOM 20 N1 A A1028 114.578 -67.241 16.376 1.00 47.40 N
ATOM 21 C2 A A1028 115.542 -66.999 15.465 1.00 58.93 C
ATOM 22 N3 A A1028 116.036 -67.784 14.491 1.00 59.99 N
ATOM 23 C4 A A1028 115.434 -68.988 14.517 1.00 49.38 C
ATOM 24 P A A1029 121.237 -71.005 13.454 1.00 66.87 P
ATOM 25 OP1 A A1029 122.409 -71.727 12.916 1.00 63.94 O
ATOM 26 OP2 A A1029 120.677 -71.419 14.760 1.00 56.46 O
ATOM 27 O5' A A1029 121.529 -69.444 13.447 1.00 54.88 O
TER

ATOM 1 O3' A B1028 120.067 -71.161 12.368 1.00 82.51 O
ATOM 2 P A B1029 121.237 -71.005 13.454 1.00 66.87 P
ATOM 3 OP1 A B1029 122.409 -71.727 12.916 1.00 63.94 O
ATOM 4 OP2 A B1029 120.677 -71.419 14.760 1.00 56.46 O
ATOM 5 O5' A B1029 121.529 -69.444 13.447 1.00 54.88 O
ATOM 6 C5' A B1029 122.138 -68.837 12.314 1.00 56.58 C
ATOM 7 C4' A B1029 122.372 -67.363 12.522 1.00 48.31 C
ATOM 8 O4' A B1029 121.107 -66.695 12.731 1.00 61.19 O
ATOM 9 C3' A B1029 123.181 -66.987 13.742 1.00 60.06 C
ATOM 10 O3' A B1029 124.579 -67.137 13.549 1.00 59.81 O
ATOM 11 C2' A B1029 122.734 -65.553 13.995 1.00 53.80 C
ATOM 12 O2' A B1029 123.314 -64.675 13.052 1.00 51.74 O
ATOM 13 C1' A B1029 121.258 -65.653 13.666 1.00 52.11 C
ATOM 14 N9 A B1029 120.423 -65.953 14.847 1.00 53.82 N
ATOM 15 C8 A B1029 119.867 -67.159 15.212 1.00 54.31 C
ATOM 16 N7 A B1029 119.138 -67.063 16.304 1.00 57.44 N
ATOM 17 C5 A B1029 119.213 -65.728 16.669 1.00 46.54 C
ATOM 18 C6 A B1029 118.665 -65.002 17.729 1.00 51.01 C
ATOM 19 N6 A B1029 117.894 -65.566 18.655 1.00 60.09 N
ATOM 20 N1 A B1029 118.935 -63.678 17.822 1.00 52.90 N
ATOM 21 C2 A B1029 119.711 -63.134 16.876 1.00 49.80 C
ATOM 22 N3 A B1029 120.281 -63.719 15.824 1.00 47.34 N
ATOM 23 C4 A B1029 119.994 -65.031 15.778 1.00 48.90 C
ATOM 24 P A B1030 125.575 -67.267 14.814 1.00 53.26 P
ATOM 25 OP1 A B1030 126.868 -67.760 14.290 1.00 73.33 O
ATOM 26 OP2 A B1030 124.891 -68.067 15.854 1.00 47.08 O
ATOM 27 O5' A B1030 125.723 -65.748 15.287 1.00 50.53 O
TER

Atoms:
OP1: (116.136,-75.286,14.683)
OP2: (115.023,-74.277,12.625)
C3': (118.715,-71.244,12.772)
C1': (116.602,-70.159,12.578)
C5': (117.830,-73.457,11.750)
O4': (116.520,-71.440,12.021)
C8: (114.814,-71.034,14.130)
O2': (118.570,-68.962,11.980)
C6: (113.999,-68.464,16.348)
C5: (114.437,-69.381,15.388)
C4: (115.434,-68.988,14.517)
P: (116.217,-74.896,13.266)
C4': (117.838,-71.936,11.740)
C2': (118.058,-69.874,12.933)
C2: (115.542,-66.999,15.465)
N1: (114.578,-67.241,16.376)
N3: (116.036,-67.784,14.491)
N6: (113.054,-68.758,17.238)
N7: (114.048,-70.673,15.128)
N9: (115.688,-70.074,13.724)
O5': (117.510,-73.990,13.034)
O3': (120.067,-71.161,12.368)
OP1: (122.409,-71.727,12.916)
OP2: (120.677,-71.419,14.760)
C3': (123.181,-66.987,13.742)
C1': (121.258,-65.653,13.666)
C5': (122.138,-68.837,12.314)
O4': (121.107,-66.695,12.731)
C8: (119.867,-67.159,15.212)
O2': (123.314,-64.675,13.052)
C6: (118.665,-65.002,17.729)
C5: (119.213,-65.728,16.669)
C4: (119.994,-65.031,15.778)
P: (121.237,-71.005,13.454)
C4': (122.372,-67.363,12.522)
C2': (122.734,-65.553,13.995)
C2: (119.711,-63.134,16.876)
N1: (118.935,-63.678,17.822)
N3: (120.281,-63.719,15.824)
N6: (117.894,-65.566,18.655)
N7: (119.138,-67.063,16.304)
N9: (120.423,-65.953,14.847)
O5': (121.529,-69.444,13.447)
O3': (124.579,-67.137,13.549)
Image (generated by PyMOL):
PyMOL image
show in jmol