Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A21:A22
Extra
PDB:
ATOM 1 O3' U A 20 -1.758 14.852 22.378 1.00 28.98 O
ATOM 2 P A A 21 -0.380 14.686 23.190 1.00 55.28 P
ATOM 3 OP1 A A 21 -0.739 14.386 24.597 1.00 57.75 O
ATOM 4 OP2 A A 21 0.441 15.885 22.905 1.00 52.74 O
ATOM 5 O5' A A 21 0.284 13.403 22.516 1.00 40.47 O
ATOM 6 C5' A A 21 -0.366 12.139 22.556 1.00 38.25 C
ATOM 7 C4' A A 21 0.621 10.997 22.564 1.00 33.93 C
ATOM 8 O4' A A 21 1.319 10.944 21.286 1.00 32.86 O
ATOM 9 C3' A A 21 1.711 11.066 23.645 1.00 33.89 C
ATOM 10 O3' A A 21 1.951 9.755 24.154 1.00 38.44 O
ATOM 11 C2' A A 21 2.935 11.523 22.856 1.00 32.31 C
ATOM 12 O2' A A 21 4.171 11.163 23.434 1.00 33.92 O
ATOM 13 C1' A A 21 2.701 10.810 21.532 1.00 30.86 C
ATOM 14 N9 A A 21 3.453 11.354 20.395 1.00 29.07 N
ATOM 15 C8 A A 21 4.076 12.573 20.269 1.00 29.20 C
ATOM 16 N7 A A 21 4.697 12.725 19.122 1.00 29.72 N
ATOM 17 C5 A A 21 4.479 11.526 18.450 1.00 29.21 C
ATOM 18 C6 A A 21 4.871 11.053 17.181 1.00 29.45 C
ATOM 19 N6 A A 21 5.603 11.757 16.311 1.00 29.83 N
ATOM 20 N1 A A 21 4.483 9.805 16.826 1.00 27.90 N
ATOM 21 C2 A A 21 3.749 9.090 17.685 1.00 24.69 C
ATOM 22 N3 A A 21 3.320 9.425 18.899 1.00 25.20 N
ATOM 23 C4 A A 21 3.723 10.669 19.229 1.00 27.24 C
ATOM 24 P A A 22 2.295 9.530 25.710 1.00 46.27 P
ATOM 25 OP1 A A 22 1.308 10.315 26.492 1.00 45.74 O
ATOM 26 OP2 A A 22 3.740 9.818 25.889 1.00 43.98 O
ATOM 27 O5' A A 22 2.027 7.969 25.902 1.00 44.56 O
TER
ATOM 1 O3' A B 21 1.951 9.755 24.154 1.00 38.44 O
ATOM 2 P A B 22 2.295 9.530 25.710 1.00 46.27 P
ATOM 3 OP1 A B 22 1.308 10.315 26.492 1.00 45.74 O
ATOM 4 OP2 A B 22 3.740 9.818 25.889 1.00 43.98 O
ATOM 5 O5' A B 22 2.027 7.969 25.902 1.00 44.56 O
ATOM 6 C5' A B 22 0.751 7.495 26.297 1.00 43.07 C
ATOM 7 C4' A B 22 0.158 6.549 25.278 1.00 37.02 C
ATOM 8 O4' A B 22 0.148 7.169 23.963 1.00 35.11 O
ATOM 9 C3' A B 22 0.904 5.247 25.043 1.00 33.12 C
ATOM 10 O3' A B 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 11 C2' A B 22 0.366 4.821 23.688 1.00 33.48 C
ATOM 12 O2' A B 22 -0.953 4.310 23.812 1.00 35.88 O
ATOM 13 C1' A B 22 0.294 6.168 22.971 1.00 33.90 C
ATOM 14 N9 A B 22 1.522 6.436 22.202 1.00 29.91 N
ATOM 15 C8 A B 22 2.537 7.317 22.475 1.00 30.97 C
ATOM 16 N7 A B 22 3.498 7.295 21.581 1.00 30.97 N
ATOM 17 C5 A B 22 3.089 6.335 20.666 1.00 28.77 C
ATOM 18 C6 A B 22 3.665 5.840 19.483 1.00 28.01 C
ATOM 19 N6 A B 22 4.831 6.267 18.990 1.00 28.94 N
ATOM 20 N1 A B 22 2.992 4.881 18.808 1.00 25.55 N
ATOM 21 C2 A B 22 1.821 4.457 19.298 1.00 25.13 C
ATOM 22 N3 A B 22 1.178 4.842 20.396 1.00 26.31 N
ATOM 23 C4 A B 22 1.874 5.797 21.040 1.00 29.02 C
ATOM 24 P G B 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 25 OP1 G B 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 26 OP2 G B 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 27 O5' G B 23 2.525 2.740 25.336 1.00 32.53 O
TER
ATOM 2 P A A 21 -0.380 14.686 23.190 1.00 55.28 P
ATOM 3 OP1 A A 21 -0.739 14.386 24.597 1.00 57.75 O
ATOM 4 OP2 A A 21 0.441 15.885 22.905 1.00 52.74 O
ATOM 5 O5' A A 21 0.284 13.403 22.516 1.00 40.47 O
ATOM 6 C5' A A 21 -0.366 12.139 22.556 1.00 38.25 C
ATOM 7 C4' A A 21 0.621 10.997 22.564 1.00 33.93 C
ATOM 8 O4' A A 21 1.319 10.944 21.286 1.00 32.86 O
ATOM 9 C3' A A 21 1.711 11.066 23.645 1.00 33.89 C
ATOM 10 O3' A A 21 1.951 9.755 24.154 1.00 38.44 O
ATOM 11 C2' A A 21 2.935 11.523 22.856 1.00 32.31 C
ATOM 12 O2' A A 21 4.171 11.163 23.434 1.00 33.92 O
ATOM 13 C1' A A 21 2.701 10.810 21.532 1.00 30.86 C
ATOM 14 N9 A A 21 3.453 11.354 20.395 1.00 29.07 N
ATOM 15 C8 A A 21 4.076 12.573 20.269 1.00 29.20 C
ATOM 16 N7 A A 21 4.697 12.725 19.122 1.00 29.72 N
ATOM 17 C5 A A 21 4.479 11.526 18.450 1.00 29.21 C
ATOM 18 C6 A A 21 4.871 11.053 17.181 1.00 29.45 C
ATOM 19 N6 A A 21 5.603 11.757 16.311 1.00 29.83 N
ATOM 20 N1 A A 21 4.483 9.805 16.826 1.00 27.90 N
ATOM 21 C2 A A 21 3.749 9.090 17.685 1.00 24.69 C
ATOM 22 N3 A A 21 3.320 9.425 18.899 1.00 25.20 N
ATOM 23 C4 A A 21 3.723 10.669 19.229 1.00 27.24 C
ATOM 24 P A A 22 2.295 9.530 25.710 1.00 46.27 P
ATOM 25 OP1 A A 22 1.308 10.315 26.492 1.00 45.74 O
ATOM 26 OP2 A A 22 3.740 9.818 25.889 1.00 43.98 O
ATOM 27 O5' A A 22 2.027 7.969 25.902 1.00 44.56 O
TER
ATOM 1 O3' A B 21 1.951 9.755 24.154 1.00 38.44 O
ATOM 2 P A B 22 2.295 9.530 25.710 1.00 46.27 P
ATOM 3 OP1 A B 22 1.308 10.315 26.492 1.00 45.74 O
ATOM 4 OP2 A B 22 3.740 9.818 25.889 1.00 43.98 O
ATOM 5 O5' A B 22 2.027 7.969 25.902 1.00 44.56 O
ATOM 6 C5' A B 22 0.751 7.495 26.297 1.00 43.07 C
ATOM 7 C4' A B 22 0.158 6.549 25.278 1.00 37.02 C
ATOM 8 O4' A B 22 0.148 7.169 23.963 1.00 35.11 O
ATOM 9 C3' A B 22 0.904 5.247 25.043 1.00 33.12 C
ATOM 10 O3' A B 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 11 C2' A B 22 0.366 4.821 23.688 1.00 33.48 C
ATOM 12 O2' A B 22 -0.953 4.310 23.812 1.00 35.88 O
ATOM 13 C1' A B 22 0.294 6.168 22.971 1.00 33.90 C
ATOM 14 N9 A B 22 1.522 6.436 22.202 1.00 29.91 N
ATOM 15 C8 A B 22 2.537 7.317 22.475 1.00 30.97 C
ATOM 16 N7 A B 22 3.498 7.295 21.581 1.00 30.97 N
ATOM 17 C5 A B 22 3.089 6.335 20.666 1.00 28.77 C
ATOM 18 C6 A B 22 3.665 5.840 19.483 1.00 28.01 C
ATOM 19 N6 A B 22 4.831 6.267 18.990 1.00 28.94 N
ATOM 20 N1 A B 22 2.992 4.881 18.808 1.00 25.55 N
ATOM 21 C2 A B 22 1.821 4.457 19.298 1.00 25.13 C
ATOM 22 N3 A B 22 1.178 4.842 20.396 1.00 26.31 N
ATOM 23 C4 A B 22 1.874 5.797 21.040 1.00 29.02 C
ATOM 24 P G B 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 25 OP1 G B 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 26 OP2 G B 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 27 O5' G B 23 2.525 2.740 25.336 1.00 32.53 O
TER
Atoms:
OP1: (-0.739,14.386,24.597)
OP2: (0.441,15.885,22.905)
C3': (1.711,11.066,23.645)
C1': (2.701,10.810,21.532)
C5': (-0.366,12.139,22.556)
O4': (1.319,10.944,21.286)
C8: (4.076,12.573,20.269)
O2': (4.171,11.163,23.434)
C6: (4.871,11.053,17.181)
C5: (4.479,11.526,18.450)
C4: (3.723,10.669,19.229)
P: (-0.380,14.686,23.190)
C4': (0.621,10.997,22.564)
C2': (2.935,11.523,22.856)
C2: (3.749,9.090,17.685)
N1: (4.483,9.805,16.826)
N3: (3.320,9.425,18.899)
N6: (5.603,11.757,16.311)
N7: (4.697,12.725,19.122)
N9: (3.453,11.354,20.395)
O5': (0.284,13.403,22.516)
O3': (1.951,9.755,24.154)
OP2: (0.441,15.885,22.905)
C3': (1.711,11.066,23.645)
C1': (2.701,10.810,21.532)
C5': (-0.366,12.139,22.556)
O4': (1.319,10.944,21.286)
C8: (4.076,12.573,20.269)
O2': (4.171,11.163,23.434)
C6: (4.871,11.053,17.181)
C5: (4.479,11.526,18.450)
C4: (3.723,10.669,19.229)
P: (-0.380,14.686,23.190)
C4': (0.621,10.997,22.564)
C2': (2.935,11.523,22.856)
C2: (3.749,9.090,17.685)
N1: (4.483,9.805,16.826)
N3: (3.320,9.425,18.899)
N6: (5.603,11.757,16.311)
N7: (4.697,12.725,19.122)
N9: (3.453,11.354,20.395)
O5': (0.284,13.403,22.516)
O3': (1.951,9.755,24.154)
OP1: (1.308,10.315,26.492)
OP2: (3.740,9.818,25.889)
C3': (0.904,5.247,25.043)
C1': (0.294,6.168,22.971)
C5': (0.751,7.495,26.297)
O4': (0.148,7.169,23.963)
C8: (2.537,7.317,22.475)
O2': (-0.953,4.310,23.812)
C6: (3.665,5.840,19.483)
C5: (3.089,6.335,20.666)
C4: (1.874,5.797,21.040)
P: (2.295,9.530,25.710)
C4': (0.158,6.549,25.278)
C2': (0.366,4.821,23.688)
C2: (1.821,4.457,19.298)
N1: (2.992,4.881,18.808)
N3: (1.178,4.842,20.396)
N6: (4.831,6.267,18.990)
N7: (3.498,7.295,21.581)
N9: (1.522,6.436,22.202)
O5': (2.027,7.969,25.902)
O3': (0.695,4.286,26.061)
OP2: (3.740,9.818,25.889)
C3': (0.904,5.247,25.043)
C1': (0.294,6.168,22.971)
C5': (0.751,7.495,26.297)
O4': (0.148,7.169,23.963)
C8: (2.537,7.317,22.475)
O2': (-0.953,4.310,23.812)
C6: (3.665,5.840,19.483)
C5: (3.089,6.335,20.666)
C4: (1.874,5.797,21.040)
P: (2.295,9.530,25.710)
C4': (0.158,6.549,25.278)
C2': (0.366,4.821,23.688)
C2: (1.821,4.457,19.298)
N1: (2.992,4.881,18.808)
N3: (1.178,4.842,20.396)
N6: (4.831,6.267,18.990)
N7: (3.498,7.295,21.581)
N9: (1.522,6.436,22.202)
O5': (2.027,7.969,25.902)
O3': (0.695,4.286,26.061)
Image (generated by PyMOL):