ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01198:02026

Extra

PDB:
ATOM 1 O3' C A1197 36.288 107.847 121.709 1.00 38.71 O
ATOM 2 P G A1198 36.889 108.598 120.417 1.00 38.36 P
ATOM 3 OP1 G A1198 36.745 107.628 119.292 1.00 37.71 O
ATOM 4 OP2 G A1198 38.227 109.146 120.754 1.00 36.89 O
ATOM 5 O5' G A1198 35.936 109.848 120.161 1.00 34.87 O
ATOM 6 C5' G A1198 34.915 109.797 119.161 1.00 34.51 C
ATOM 7 C4' G A1198 34.517 111.189 118.748 1.00 35.50 C
ATOM 8 O4' G A1198 33.514 111.095 117.701 1.00 36.80 O
ATOM 9 C3' G A1198 33.851 112.016 119.831 1.00 34.56 C
ATOM 10 O3' G A1198 34.788 112.665 120.661 1.00 35.24 O
ATOM 11 C2' G A1198 33.012 112.984 119.020 1.00 35.71 C
ATOM 12 O2' G A1198 33.784 114.009 118.435 1.00 34.74 O
ATOM 13 C1' G A1198 32.495 112.051 117.926 1.00 35.26 C
ATOM 14 N9 G A1198 31.291 111.327 118.330 1.00 34.87 N
ATOM 15 C8 G A1198 31.130 109.963 118.423 1.00 34.48 C
ATOM 16 N7 G A1198 29.920 109.613 118.766 1.00 35.51 N
ATOM 17 C5 G A1198 29.247 110.818 118.918 1.00 35.27 C
ATOM 18 C6 G A1198 27.898 111.080 119.267 1.00 35.79 C
ATOM 19 O6 G A1198 26.992 110.270 119.495 1.00 36.76 O
ATOM 20 N1 G A1198 27.642 112.448 119.323 1.00 35.32 N
ATOM 21 C2 G A1198 28.562 113.435 119.058 1.00 33.92 C
ATOM 22 N2 G A1198 28.134 114.699 119.140 1.00 33.05 N
ATOM 23 N3 G A1198 29.815 113.200 118.727 1.00 34.47 N
ATOM 24 C4 G A1198 30.086 111.883 118.672 1.00 33.63 C
ATOM 25 P G A1199 34.548 112.693 122.248 1.00 38.16 P
ATOM 26 OP1 G A1199 35.869 112.971 122.859 1.00 36.65 O
ATOM 27 OP2 G A1199 33.789 111.468 122.650 1.00 35.54 O
ATOM 28 O5' G A1199 33.619 113.963 122.471 1.00 33.43 O
TER

ATOM 1 O3' G B2025 30.606 116.859 117.233 1.00 37.52 O
ATOM 2 P G B2026 29.791 118.149 117.727 1.00 37.79 P
ATOM 3 OP1 G B2026 28.542 117.613 118.325 1.00 40.73 O
ATOM 4 OP2 G B2026 29.706 119.162 116.638 1.00 37.36 O
ATOM 5 O5' G B2026 30.713 118.703 118.899 1.00 35.91 O
ATOM 6 C5' G B2026 30.731 120.086 119.234 1.00 35.32 C
ATOM 7 C4' G B2026 32.023 120.430 119.924 1.00 34.52 C
ATOM 8 O4' G B2026 33.139 119.972 119.115 1.00 35.93 O
ATOM 9 C3' G B2026 32.253 121.920 120.081 1.00 35.75 C
ATOM 10 O3' G B2026 31.579 122.422 121.225 1.00 34.47 O
ATOM 11 C2' G B2026 33.769 122.004 120.154 1.00 36.16 C
ATOM 12 O2' G B2026 34.274 121.610 121.415 1.00 37.59 O
ATOM 13 C1' G B2026 34.167 120.952 119.114 1.00 35.02 C
ATOM 14 N9 G B2026 34.278 121.490 117.758 1.00 33.95 N
ATOM 15 C8 G B2026 33.452 121.220 116.694 1.00 33.47 C
ATOM 16 N7 G B2026 33.782 121.865 115.609 1.00 34.75 N
ATOM 17 C5 G B2026 34.898 122.604 115.974 1.00 35.09 C
ATOM 18 C6 G B2026 35.703 123.505 115.211 1.00 35.42 C
ATOM 19 O6 G B2026 35.576 123.848 114.024 1.00 32.21 O
ATOM 20 N1 G B2026 36.743 124.026 115.974 1.00 35.65 N
ATOM 21 C2 G B2026 36.984 123.725 117.292 1.00 34.79 C
ATOM 22 N2 G B2026 38.048 124.327 117.848 1.00 37.12 N
ATOM 23 N3 G B2026 36.244 122.898 118.012 1.00 33.49 N
ATOM 24 C4 G B2026 35.225 122.377 117.296 1.00 34.75 C
ATOM 25 P A B2027 30.831 123.838 121.148 1.00 35.03 P
ATOM 26 OP1 A B2027 30.064 123.979 122.401 1.00 37.42 O
ATOM 27 OP2 A B2027 30.133 123.976 119.849 1.00 36.48 O
ATOM 28 O5' A B2027 32.028 124.884 121.176 1.00 37.86 O
TER

Atoms:
OP1: (36.745,107.628,119.292)
OP2: (38.227,109.146,120.754)
C3': (33.851,112.016,119.831)
C1': (32.495,112.051,117.926)
C5': (34.915,109.797,119.161)
O6: (26.992,110.270,119.495)
O4': (33.514,111.095,117.701)
C8: (31.130,109.963,118.423)
C2: (28.562,113.435,119.058)
C6: (27.898,111.080,119.267)
C5: (29.247,110.818,118.918)
C4: (30.086,111.883,118.672)
P: (36.889,108.598,120.417)
C4': (34.517,111.189,118.748)
C2': (33.012,112.984,119.020)
O2': (33.784,114.009,118.435)
N1: (27.642,112.448,119.323)
N2: (28.134,114.699,119.140)
N3: (29.815,113.200,118.727)
N7: (29.920,109.613,118.766)
N9: (31.291,111.327,118.330)
O5': (35.936,109.848,120.161)
O3': (34.788,112.665,120.661)
OP1: (28.542,117.613,118.325)
OP2: (29.706,119.162,116.638)
C3': (32.253,121.920,120.081)
C1': (34.167,120.952,119.114)
C5': (30.731,120.086,119.234)
O6: (35.576,123.848,114.024)
O4': (33.139,119.972,119.115)
C8: (33.452,121.220,116.694)
C2: (36.984,123.725,117.292)
C6: (35.703,123.505,115.211)
C5: (34.898,122.604,115.974)
C4: (35.225,122.377,117.296)
P: (29.791,118.149,117.727)
C4': (32.023,120.430,119.924)
C2': (33.769,122.004,120.154)
O2': (34.274,121.610,121.415)
N1: (36.743,124.026,115.974)
N2: (38.048,124.327,117.848)
N3: (36.244,122.898,118.012)
N7: (33.782,121.865,115.609)
N9: (34.278,121.490,117.758)
O5': (30.713,118.703,118.899)
O3': (31.579,122.422,121.225)
Image (generated by PyMOL):
PyMOL image
show in jmol