Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2219:A2112
Extra
PDB:
ATOM 1 O3' A A2218 125.665 -43.063 -39.594 1.00 32.46 O
ATOM 2 P G A2219 125.385 -42.554 -41.081 1.00 35.39 P
ATOM 3 OP1 G A2219 124.027 -42.999 -41.445 1.00 44.94 O
ATOM 4 OP2 G A2219 126.526 -42.993 -41.921 1.00 48.12 O
ATOM 5 O5' G A2219 125.399 -40.982 -40.907 1.00 33.53 O
ATOM 6 C5' G A2219 124.392 -40.339 -40.165 1.00 39.71 C
ATOM 7 C4' G A2219 124.469 -38.860 -40.338 1.00 48.60 C
ATOM 8 O4' G A2219 125.427 -38.326 -39.411 1.00 53.52 O
ATOM 9 C3' G A2219 124.931 -38.381 -41.706 1.00 43.64 C
ATOM 10 O3' G A2219 123.856 -38.280 -42.616 1.00 47.95 O
ATOM 11 C2' G A2219 125.585 -37.046 -41.401 1.00 42.62 C
ATOM 12 O2' G A2219 124.603 -36.028 -41.298 1.00 41.24 O
ATOM 13 C1' G A2219 126.167 -37.295 -40.010 1.00 49.08 C
ATOM 14 N9 G A2219 127.591 -37.714 -40.027 1.00 52.14 N
ATOM 15 C8 G A2219 128.258 -38.652 -40.792 1.00 50.74 C
ATOM 16 N7 G A2219 129.530 -38.791 -40.481 1.00 43.17 N
ATOM 17 C5 G A2219 129.700 -37.904 -39.427 1.00 42.44 C
ATOM 18 C6 G A2219 130.839 -37.590 -38.663 1.00 43.55 C
ATOM 19 O6 G A2219 131.970 -38.060 -38.772 1.00 48.40 O
ATOM 20 N1 G A2219 130.562 -36.632 -37.695 1.00 45.83 N
ATOM 21 C2 G A2219 129.346 -36.045 -37.473 1.00 44.22 C
ATOM 22 N2 G A2219 129.243 -35.134 -36.488 1.00 44.21 N
ATOM 23 N3 G A2219 128.286 -36.330 -38.184 1.00 44.86 N
ATOM 24 C4 G A2219 128.529 -37.251 -39.132 1.00 43.61 C
ATOM 25 P U A2220 124.101 -38.310 -44.194 1.00 46.10 P
ATOM 26 OP1 U A2220 125.488 -38.770 -44.422 1.00 73.82 O
ATOM 27 OP2 U A2220 123.693 -36.984 -44.704 1.00 57.57 O
ATOM 28 O5' U A2220 123.090 -39.434 -44.679 1.00 40.91 O
TER
ATOM 1 O3' C B2111 125.964 -35.118 -35.507 1.00 37.32 O
ATOM 2 P G B2112 125.074 -33.840 -35.873 1.00 50.28 P
ATOM 3 OP1 G B2112 125.908 -32.947 -36.711 1.00 56.35 O
ATOM 4 OP2 G B2112 124.508 -33.307 -34.602 1.00 38.42 O
ATOM 5 O5' G B2112 123.916 -34.467 -36.749 1.00 50.44 O
ATOM 6 C5' G B2112 124.179 -35.100 -37.993 1.00 39.92 C
ATOM 7 C4' G B2112 122.909 -35.249 -38.779 1.00 43.97 C
ATOM 8 O4' G B2112 122.071 -36.270 -38.147 1.00 50.04 O
ATOM 9 C3' G B2112 122.056 -33.978 -38.832 1.00 46.68 C
ATOM 10 O3' G B2112 121.430 -33.867 -40.102 1.00 54.75 O
ATOM 11 C2' G B2112 121.000 -34.237 -37.772 1.00 46.33 C
ATOM 12 O2' G B2112 119.800 -33.519 -37.945 1.00 58.50 O
ATOM 13 C1' G B2112 120.787 -35.733 -37.923 1.00 43.08 C
ATOM 14 N9 G B2112 120.161 -36.352 -36.750 1.00 40.17 N
ATOM 15 C8 G B2112 120.248 -35.894 -35.465 1.00 37.70 C
ATOM 16 N7 G B2112 119.496 -36.558 -34.647 1.00 42.42 N
ATOM 17 C5 G B2112 118.827 -37.487 -35.440 1.00 43.08 C
ATOM 18 C6 G B2112 117.868 -38.490 -35.117 1.00 41.71 C
ATOM 19 O6 G B2112 117.364 -38.811 -34.038 1.00 41.75 O
ATOM 20 N1 G B2112 117.480 -39.194 -36.228 1.00 37.27 N
ATOM 21 C2 G B2112 117.934 -38.982 -37.487 1.00 40.88 C
ATOM 22 N2 G B2112 117.413 -39.788 -38.418 1.00 49.52 N
ATOM 23 N3 G B2112 118.812 -38.059 -37.808 1.00 47.23 N
ATOM 24 C4 G B2112 119.216 -37.350 -36.743 1.00 42.35 C
ATOM 25 P C B2113 121.947 -32.776 -41.149 1.00 49.62 P
ATOM 26 OP1 C B2113 121.945 -31.477 -40.441 1.00 56.94 O
ATOM 27 OP2 C B2113 121.133 -32.924 -42.379 1.00 68.05 O
ATOM 28 O5' C B2113 123.441 -33.255 -41.430 1.00 55.71 O
TER
ATOM 2 P G A2219 125.385 -42.554 -41.081 1.00 35.39 P
ATOM 3 OP1 G A2219 124.027 -42.999 -41.445 1.00 44.94 O
ATOM 4 OP2 G A2219 126.526 -42.993 -41.921 1.00 48.12 O
ATOM 5 O5' G A2219 125.399 -40.982 -40.907 1.00 33.53 O
ATOM 6 C5' G A2219 124.392 -40.339 -40.165 1.00 39.71 C
ATOM 7 C4' G A2219 124.469 -38.860 -40.338 1.00 48.60 C
ATOM 8 O4' G A2219 125.427 -38.326 -39.411 1.00 53.52 O
ATOM 9 C3' G A2219 124.931 -38.381 -41.706 1.00 43.64 C
ATOM 10 O3' G A2219 123.856 -38.280 -42.616 1.00 47.95 O
ATOM 11 C2' G A2219 125.585 -37.046 -41.401 1.00 42.62 C
ATOM 12 O2' G A2219 124.603 -36.028 -41.298 1.00 41.24 O
ATOM 13 C1' G A2219 126.167 -37.295 -40.010 1.00 49.08 C
ATOM 14 N9 G A2219 127.591 -37.714 -40.027 1.00 52.14 N
ATOM 15 C8 G A2219 128.258 -38.652 -40.792 1.00 50.74 C
ATOM 16 N7 G A2219 129.530 -38.791 -40.481 1.00 43.17 N
ATOM 17 C5 G A2219 129.700 -37.904 -39.427 1.00 42.44 C
ATOM 18 C6 G A2219 130.839 -37.590 -38.663 1.00 43.55 C
ATOM 19 O6 G A2219 131.970 -38.060 -38.772 1.00 48.40 O
ATOM 20 N1 G A2219 130.562 -36.632 -37.695 1.00 45.83 N
ATOM 21 C2 G A2219 129.346 -36.045 -37.473 1.00 44.22 C
ATOM 22 N2 G A2219 129.243 -35.134 -36.488 1.00 44.21 N
ATOM 23 N3 G A2219 128.286 -36.330 -38.184 1.00 44.86 N
ATOM 24 C4 G A2219 128.529 -37.251 -39.132 1.00 43.61 C
ATOM 25 P U A2220 124.101 -38.310 -44.194 1.00 46.10 P
ATOM 26 OP1 U A2220 125.488 -38.770 -44.422 1.00 73.82 O
ATOM 27 OP2 U A2220 123.693 -36.984 -44.704 1.00 57.57 O
ATOM 28 O5' U A2220 123.090 -39.434 -44.679 1.00 40.91 O
TER
ATOM 1 O3' C B2111 125.964 -35.118 -35.507 1.00 37.32 O
ATOM 2 P G B2112 125.074 -33.840 -35.873 1.00 50.28 P
ATOM 3 OP1 G B2112 125.908 -32.947 -36.711 1.00 56.35 O
ATOM 4 OP2 G B2112 124.508 -33.307 -34.602 1.00 38.42 O
ATOM 5 O5' G B2112 123.916 -34.467 -36.749 1.00 50.44 O
ATOM 6 C5' G B2112 124.179 -35.100 -37.993 1.00 39.92 C
ATOM 7 C4' G B2112 122.909 -35.249 -38.779 1.00 43.97 C
ATOM 8 O4' G B2112 122.071 -36.270 -38.147 1.00 50.04 O
ATOM 9 C3' G B2112 122.056 -33.978 -38.832 1.00 46.68 C
ATOM 10 O3' G B2112 121.430 -33.867 -40.102 1.00 54.75 O
ATOM 11 C2' G B2112 121.000 -34.237 -37.772 1.00 46.33 C
ATOM 12 O2' G B2112 119.800 -33.519 -37.945 1.00 58.50 O
ATOM 13 C1' G B2112 120.787 -35.733 -37.923 1.00 43.08 C
ATOM 14 N9 G B2112 120.161 -36.352 -36.750 1.00 40.17 N
ATOM 15 C8 G B2112 120.248 -35.894 -35.465 1.00 37.70 C
ATOM 16 N7 G B2112 119.496 -36.558 -34.647 1.00 42.42 N
ATOM 17 C5 G B2112 118.827 -37.487 -35.440 1.00 43.08 C
ATOM 18 C6 G B2112 117.868 -38.490 -35.117 1.00 41.71 C
ATOM 19 O6 G B2112 117.364 -38.811 -34.038 1.00 41.75 O
ATOM 20 N1 G B2112 117.480 -39.194 -36.228 1.00 37.27 N
ATOM 21 C2 G B2112 117.934 -38.982 -37.487 1.00 40.88 C
ATOM 22 N2 G B2112 117.413 -39.788 -38.418 1.00 49.52 N
ATOM 23 N3 G B2112 118.812 -38.059 -37.808 1.00 47.23 N
ATOM 24 C4 G B2112 119.216 -37.350 -36.743 1.00 42.35 C
ATOM 25 P C B2113 121.947 -32.776 -41.149 1.00 49.62 P
ATOM 26 OP1 C B2113 121.945 -31.477 -40.441 1.00 56.94 O
ATOM 27 OP2 C B2113 121.133 -32.924 -42.379 1.00 68.05 O
ATOM 28 O5' C B2113 123.441 -33.255 -41.430 1.00 55.71 O
TER
Atoms:
OP1: (124.027,-42.999,-41.445)
OP2: (126.526,-42.993,-41.921)
C3': (124.931,-38.381,-41.706)
C1': (126.167,-37.295,-40.010)
C5': (124.392,-40.339,-40.165)
O6: (131.970,-38.060,-38.772)
O4': (125.427,-38.326,-39.411)
C8: (128.258,-38.652,-40.792)
C2: (129.346,-36.045,-37.473)
C6: (130.839,-37.590,-38.663)
C5: (129.700,-37.904,-39.427)
C4: (128.529,-37.251,-39.132)
P: (125.385,-42.554,-41.081)
C4': (124.469,-38.860,-40.338)
C2': (125.585,-37.046,-41.401)
O2': (124.603,-36.028,-41.298)
N1: (130.562,-36.632,-37.695)
N2: (129.243,-35.134,-36.488)
N3: (128.286,-36.330,-38.184)
N7: (129.530,-38.791,-40.481)
N9: (127.591,-37.714,-40.027)
O5': (125.399,-40.982,-40.907)
O3': (123.856,-38.280,-42.616)
OP2: (126.526,-42.993,-41.921)
C3': (124.931,-38.381,-41.706)
C1': (126.167,-37.295,-40.010)
C5': (124.392,-40.339,-40.165)
O6: (131.970,-38.060,-38.772)
O4': (125.427,-38.326,-39.411)
C8: (128.258,-38.652,-40.792)
C2: (129.346,-36.045,-37.473)
C6: (130.839,-37.590,-38.663)
C5: (129.700,-37.904,-39.427)
C4: (128.529,-37.251,-39.132)
P: (125.385,-42.554,-41.081)
C4': (124.469,-38.860,-40.338)
C2': (125.585,-37.046,-41.401)
O2': (124.603,-36.028,-41.298)
N1: (130.562,-36.632,-37.695)
N2: (129.243,-35.134,-36.488)
N3: (128.286,-36.330,-38.184)
N7: (129.530,-38.791,-40.481)
N9: (127.591,-37.714,-40.027)
O5': (125.399,-40.982,-40.907)
O3': (123.856,-38.280,-42.616)
OP1: (125.908,-32.947,-36.711)
OP2: (124.508,-33.307,-34.602)
C3': (122.056,-33.978,-38.832)
C1': (120.787,-35.733,-37.923)
C5': (124.179,-35.100,-37.993)
O6: (117.364,-38.811,-34.038)
O4': (122.071,-36.270,-38.147)
C8: (120.248,-35.894,-35.465)
C2: (117.934,-38.982,-37.487)
C6: (117.868,-38.490,-35.117)
C5: (118.827,-37.487,-35.440)
C4: (119.216,-37.350,-36.743)
P: (125.074,-33.840,-35.873)
C4': (122.909,-35.249,-38.779)
C2': (121.000,-34.237,-37.772)
O2': (119.800,-33.519,-37.945)
N1: (117.480,-39.194,-36.228)
N2: (117.413,-39.788,-38.418)
N3: (118.812,-38.059,-37.808)
N7: (119.496,-36.558,-34.647)
N9: (120.161,-36.352,-36.750)
O5': (123.916,-34.467,-36.749)
O3': (121.430,-33.867,-40.102)
OP2: (124.508,-33.307,-34.602)
C3': (122.056,-33.978,-38.832)
C1': (120.787,-35.733,-37.923)
C5': (124.179,-35.100,-37.993)
O6: (117.364,-38.811,-34.038)
O4': (122.071,-36.270,-38.147)
C8: (120.248,-35.894,-35.465)
C2: (117.934,-38.982,-37.487)
C6: (117.868,-38.490,-35.117)
C5: (118.827,-37.487,-35.440)
C4: (119.216,-37.350,-36.743)
P: (125.074,-33.840,-35.873)
C4': (122.909,-35.249,-38.779)
C2': (121.000,-34.237,-37.772)
O2': (119.800,-33.519,-37.945)
N1: (117.480,-39.194,-36.228)
N2: (117.413,-39.788,-38.418)
N3: (118.812,-38.059,-37.808)
N7: (119.496,-36.558,-34.647)
N9: (120.161,-36.352,-36.750)
O5': (123.916,-34.467,-36.749)
O3': (121.430,-33.867,-40.102)
Image (generated by PyMOL):