ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A300:A112

Extra

PDB:
ATOM 1 O3' G A 299 124.833 76.658 4.008 1.00 57.59 O
ATOM 2 P G A 300 124.856 75.423 2.980 1.00 58.01 P
ATOM 3 OP1 G A 300 123.523 74.746 2.975 1.00 57.77 O
ATOM 4 OP2 G A 300 126.076 74.633 3.259 1.00 57.10 O
ATOM 5 O5' G A 300 125.013 76.147 1.592 1.00 57.36 O
ATOM 6 C5' G A 300 123.925 76.897 1.061 1.00 56.41 C
ATOM 7 C4' G A 300 124.168 77.200 -0.380 1.00 56.44 C
ATOM 8 O4' G A 300 125.252 78.149 -0.490 1.00 57.04 O
ATOM 9 C3' G A 300 124.623 76.038 -1.238 1.00 56.87 C
ATOM 10 O3' G A 300 123.585 75.217 -1.649 1.00 56.33 O
ATOM 11 C2' G A 300 125.289 76.743 -2.407 1.00 57.28 C
ATOM 12 O2' G A 300 124.348 77.202 -3.361 1.00 57.99 O
ATOM 13 C1' G A 300 125.951 77.926 -1.703 1.00 57.80 C
ATOM 14 N9 G A 300 127.354 77.653 -1.402 1.00 59.27 N
ATOM 15 C8 G A 300 127.905 77.263 -0.202 1.00 59.59 C
ATOM 16 N7 G A 300 129.192 77.047 -0.277 1.00 60.59 N
ATOM 17 C5 G A 300 129.512 77.320 -1.603 1.00 61.41 C
ATOM 18 C6 G A 300 130.754 77.250 -2.289 1.00 61.67 C
ATOM 19 O6 G A 300 131.861 76.916 -1.849 1.00 63.10 O
ATOM 20 N1 G A 300 130.621 77.612 -3.624 1.00 60.64 N
ATOM 21 C2 G A 300 129.449 77.992 -4.229 1.00 61.18 C
ATOM 22 N2 G A 300 129.515 78.301 -5.536 1.00 61.38 N
ATOM 23 N3 G A 300 128.290 78.062 -3.605 1.00 61.51 N
ATOM 24 C4 G A 300 128.392 77.711 -2.305 1.00 60.91 C
ATOM 25 P C A 301 123.893 73.678 -1.966 1.00 58.09 P
ATOM 26 OP1 C A 301 122.552 73.012 -2.193 1.00 56.50 O
ATOM 27 OP2 C A 301 124.824 73.180 -0.914 1.00 56.15 O
ATOM 28 O5' C A 301 124.669 73.735 -3.355 1.00 56.07 O
TER

ATOM 1 O3' C B 111 128.766 78.071 -8.358 1.00 54.99 O
ATOM 2 P G B 112 127.324 78.777 -8.213 1.00 55.89 P
ATOM 3 OP1 G B 112 127.028 78.848 -6.746 1.00 56.13 O
ATOM 4 OP2 G B 112 126.383 78.090 -9.129 1.00 56.23 O
ATOM 5 O5' G B 112 127.538 80.249 -8.762 1.00 54.98 O
ATOM 6 C5' G B 112 128.469 81.139 -8.135 1.00 55.61 C
ATOM 7 C4' G B 112 128.543 82.443 -8.891 1.00 55.48 C
ATOM 8 O4' G B 112 129.232 82.268 -10.155 1.00 56.68 O
ATOM 9 C3' G B 112 127.218 83.055 -9.288 1.00 55.39 C
ATOM 10 O3' G B 112 126.650 83.761 -8.229 1.00 55.25 O
ATOM 11 C2' G B 112 127.618 83.979 -10.427 1.00 55.35 C
ATOM 12 O2' G B 112 128.182 85.170 -9.939 1.00 54.65 O
ATOM 13 C1' G B 112 128.719 83.177 -11.111 1.00 55.43 C
ATOM 14 N9 G B 112 128.208 82.426 -12.251 1.00 56.59 N
ATOM 15 C8 G B 112 127.818 81.109 -12.269 1.00 57.73 C
ATOM 16 N7 G B 112 127.361 80.726 -13.432 1.00 59.26 N
ATOM 17 C5 G B 112 127.464 81.856 -14.234 1.00 59.05 C
ATOM 18 C6 G B 112 127.094 82.060 -15.596 1.00 59.13 C
ATOM 19 O6 G B 112 126.555 81.263 -16.389 1.00 62.84 O
ATOM 20 N1 G B 112 127.381 83.350 -16.008 1.00 58.15 N
ATOM 21 C2 G B 112 127.926 84.328 -15.220 1.00 58.50 C
ATOM 22 N2 G B 112 128.121 85.511 -15.814 1.00 58.88 N
ATOM 23 N3 G B 112 128.257 84.162 -13.949 1.00 58.14 N
ATOM 24 C4 G B 112 128.000 82.910 -13.524 1.00 58.00 C
ATOM 25 P U B 113 125.052 83.907 -8.138 1.00 54.77 P
ATOM 26 OP1 U B 113 124.838 84.640 -6.842 1.00 55.78 O
ATOM 27 OP2 U B 113 124.385 82.610 -8.401 1.00 52.45 O
ATOM 28 O5' U B 113 124.683 84.851 -9.342 1.00 54.77 O
TER

Atoms:
OP1: (123.523,74.746,2.975)
OP2: (126.076,74.633,3.259)
C3': (124.623,76.038,-1.238)
C1': (125.951,77.926,-1.703)
C5': (123.925,76.897,1.061)
O6: (131.861,76.916,-1.849)
O4': (125.252,78.149,-0.490)
C8: (127.905,77.263,-0.202)
C2: (129.449,77.992,-4.229)
C6: (130.754,77.250,-2.289)
C5: (129.512,77.320,-1.603)
C4: (128.392,77.711,-2.305)
P: (124.856,75.423,2.980)
C4': (124.168,77.200,-0.380)
C2': (125.289,76.743,-2.407)
O2': (124.348,77.202,-3.361)
N1: (130.621,77.612,-3.624)
N2: (129.515,78.301,-5.536)
N3: (128.290,78.062,-3.605)
N7: (129.192,77.047,-0.277)
N9: (127.354,77.653,-1.402)
O5': (125.013,76.147,1.592)
O3': (123.585,75.217,-1.649)
OP1: (127.028,78.848,-6.746)
OP2: (126.383,78.090,-9.129)
C3': (127.218,83.055,-9.288)
C1': (128.719,83.177,-11.111)
C5': (128.469,81.139,-8.135)
O6: (126.555,81.263,-16.389)
O4': (129.232,82.268,-10.155)
C8: (127.818,81.109,-12.269)
C2: (127.926,84.328,-15.220)
C6: (127.094,82.060,-15.596)
C5: (127.464,81.856,-14.234)
C4: (128.000,82.910,-13.524)
P: (127.324,78.777,-8.213)
C4': (128.543,82.443,-8.891)
C2': (127.618,83.979,-10.427)
O2': (128.182,85.170,-9.939)
N1: (127.381,83.350,-16.008)
N2: (128.121,85.511,-15.814)
N3: (128.257,84.162,-13.949)
N7: (127.361,80.726,-13.432)
N9: (128.208,82.426,-12.251)
O5': (127.538,80.249,-8.762)
O3': (126.650,83.761,-8.229)
Image (generated by PyMOL):
PyMOL image
show in jmol