Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A479:A498
Extra
PDB:
ATOM 1 O3' A A 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 2 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 3 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 4 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 5 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
ATOM 6 C5' A A 479 -22.505-103.184 37.776 1.00 0.01 C
ATOM 7 C4' A A 479 -23.087-104.307 36.977 1.00 0.01 C
ATOM 8 O4' A A 479 -24.289-104.788 37.593 1.00 0.01 O
ATOM 9 C3' A A 479 -23.543-104.006 35.578 1.00 0.01 C
ATOM 10 O3' A A 479 -22.486-103.783 34.671 1.00 0.01 O
ATOM 11 C2' A A 479 -24.356-105.252 35.278 1.00 0.01 C
ATOM 12 O2' A A 479 -23.511-106.369 35.028 1.00 0.01 O
ATOM 13 C1' A A 479 -25.046-105.475 36.621 1.00 0.01 C
ATOM 14 N9 A A 479 -26.435-104.977 36.634 1.00 0.01 N
ATOM 15 C8 A A 479 -27.001-104.147 37.526 1.00 0.01 C
ATOM 16 N7 A A 479 -28.251-103.903 37.293 1.00 0.01 N
ATOM 17 C5 A A 479 -28.543-104.608 36.165 1.00 0.01 C
ATOM 18 C6 A A 479 -29.717-104.742 35.422 1.00 0.01 C
ATOM 19 N6 A A 479 -30.877-104.144 35.710 1.00 0.01 N
ATOM 20 N1 A A 479 -29.679-105.539 34.356 1.00 0.01 N
ATOM 21 C2 A A 479 -28.533-106.134 34.058 1.00 0.01 C
ATOM 22 N3 A A 479 -27.380-106.085 34.699 1.00 0.01 N
ATOM 23 C4 A A 479 -27.442-105.289 35.762 1.00 0.01 C
ATOM 24 P G A 480 -22.780-103.093 33.250 1.00 0.01 P
ATOM 25 OP1 G A 480 -24.035-103.647 32.736 1.00 0.01 O
ATOM 26 OP2 G A 480 -21.579-103.229 32.457 1.00 0.01 O
ATOM 27 O5' G A 480 -22.992-101.577 33.612 1.00 0.01 O
TER
ATOM 1 O3' G B 497 -22.416-112.629 29.080 1.00 0.01 O
ATOM 2 P U B 498 -23.514-113.126 30.124 1.00 0.01 P
ATOM 3 OP1 U B 498 -22.812-113.933 31.135 1.00 0.01 O
ATOM 4 OP2 U B 498 -24.591-113.753 29.346 1.00 0.01 O
ATOM 5 O5' U B 498 -24.026-111.773 30.771 1.00 0.01 O
ATOM 6 C5' U B 498 -23.255-111.086 31.735 1.00 0.01 C
ATOM 7 C4' U B 498 -24.002-109.902 32.289 1.00 0.01 C
ATOM 8 O4' U B 498 -24.343-108.987 31.228 1.00 0.01 O
ATOM 9 C3' U B 498 -25.325-110.209 32.931 1.00 0.01 C
ATOM 10 O3' U B 498 -25.178-110.658 34.244 1.00 0.01 O
ATOM 11 C2' U B 498 -26.050-108.890 32.842 1.00 0.01 C
ATOM 12 O2' U B 498 -25.566-108.005 33.834 1.00 0.01 O
ATOM 13 C1' U B 498 -25.584-108.387 31.497 1.00 0.01 C
ATOM 14 N1 U B 498 -26.520-108.711 30.405 1.00 0.01 N
ATOM 15 C2 U B 498 -27.439-107.749 30.151 1.00 0.01 C
ATOM 16 O2 U B 498 -27.475-106.778 30.851 1.00 0.01 O
ATOM 17 N3 U B 498 -28.314-107.940 29.126 1.00 0.01 N
ATOM 18 C4 U B 498 -28.349-109.024 28.310 1.00 0.01 C
ATOM 19 O4 U B 498 -29.192-109.065 27.424 1.00 0.01 O
ATOM 20 C5 U B 498 -27.350-110.006 28.607 1.00 0.01 C
ATOM 21 C6 U B 498 -26.483-109.815 29.610 1.00 0.01 C
ATOM 22 P G B 499 -25.912-111.976 34.700 1.00 0.01 P
ATOM 23 OP1 G B 499 -25.373-112.349 36.035 1.00 0.01 O
ATOM 24 OP2 G B 499 -25.774-112.923 33.573 1.00 0.01 O
ATOM 25 O5' G B 499 -27.427-111.510 34.836 1.00 0.01 O
TER
ATOM 2 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 3 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 4 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 5 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
ATOM 6 C5' A A 479 -22.505-103.184 37.776 1.00 0.01 C
ATOM 7 C4' A A 479 -23.087-104.307 36.977 1.00 0.01 C
ATOM 8 O4' A A 479 -24.289-104.788 37.593 1.00 0.01 O
ATOM 9 C3' A A 479 -23.543-104.006 35.578 1.00 0.01 C
ATOM 10 O3' A A 479 -22.486-103.783 34.671 1.00 0.01 O
ATOM 11 C2' A A 479 -24.356-105.252 35.278 1.00 0.01 C
ATOM 12 O2' A A 479 -23.511-106.369 35.028 1.00 0.01 O
ATOM 13 C1' A A 479 -25.046-105.475 36.621 1.00 0.01 C
ATOM 14 N9 A A 479 -26.435-104.977 36.634 1.00 0.01 N
ATOM 15 C8 A A 479 -27.001-104.147 37.526 1.00 0.01 C
ATOM 16 N7 A A 479 -28.251-103.903 37.293 1.00 0.01 N
ATOM 17 C5 A A 479 -28.543-104.608 36.165 1.00 0.01 C
ATOM 18 C6 A A 479 -29.717-104.742 35.422 1.00 0.01 C
ATOM 19 N6 A A 479 -30.877-104.144 35.710 1.00 0.01 N
ATOM 20 N1 A A 479 -29.679-105.539 34.356 1.00 0.01 N
ATOM 21 C2 A A 479 -28.533-106.134 34.058 1.00 0.01 C
ATOM 22 N3 A A 479 -27.380-106.085 34.699 1.00 0.01 N
ATOM 23 C4 A A 479 -27.442-105.289 35.762 1.00 0.01 C
ATOM 24 P G A 480 -22.780-103.093 33.250 1.00 0.01 P
ATOM 25 OP1 G A 480 -24.035-103.647 32.736 1.00 0.01 O
ATOM 26 OP2 G A 480 -21.579-103.229 32.457 1.00 0.01 O
ATOM 27 O5' G A 480 -22.992-101.577 33.612 1.00 0.01 O
TER
ATOM 1 O3' G B 497 -22.416-112.629 29.080 1.00 0.01 O
ATOM 2 P U B 498 -23.514-113.126 30.124 1.00 0.01 P
ATOM 3 OP1 U B 498 -22.812-113.933 31.135 1.00 0.01 O
ATOM 4 OP2 U B 498 -24.591-113.753 29.346 1.00 0.01 O
ATOM 5 O5' U B 498 -24.026-111.773 30.771 1.00 0.01 O
ATOM 6 C5' U B 498 -23.255-111.086 31.735 1.00 0.01 C
ATOM 7 C4' U B 498 -24.002-109.902 32.289 1.00 0.01 C
ATOM 8 O4' U B 498 -24.343-108.987 31.228 1.00 0.01 O
ATOM 9 C3' U B 498 -25.325-110.209 32.931 1.00 0.01 C
ATOM 10 O3' U B 498 -25.178-110.658 34.244 1.00 0.01 O
ATOM 11 C2' U B 498 -26.050-108.890 32.842 1.00 0.01 C
ATOM 12 O2' U B 498 -25.566-108.005 33.834 1.00 0.01 O
ATOM 13 C1' U B 498 -25.584-108.387 31.497 1.00 0.01 C
ATOM 14 N1 U B 498 -26.520-108.711 30.405 1.00 0.01 N
ATOM 15 C2 U B 498 -27.439-107.749 30.151 1.00 0.01 C
ATOM 16 O2 U B 498 -27.475-106.778 30.851 1.00 0.01 O
ATOM 17 N3 U B 498 -28.314-107.940 29.126 1.00 0.01 N
ATOM 18 C4 U B 498 -28.349-109.024 28.310 1.00 0.01 C
ATOM 19 O4 U B 498 -29.192-109.065 27.424 1.00 0.01 O
ATOM 20 C5 U B 498 -27.350-110.006 28.607 1.00 0.01 C
ATOM 21 C6 U B 498 -26.483-109.815 29.610 1.00 0.01 C
ATOM 22 P G B 499 -25.912-111.976 34.700 1.00 0.01 P
ATOM 23 OP1 G B 499 -25.373-112.349 36.035 1.00 0.01 O
ATOM 24 OP2 G B 499 -25.774-112.923 33.573 1.00 0.01 O
ATOM 25 O5' G B 499 -27.427-111.510 34.836 1.00 0.01 O
TER
Atoms:
OP1: (-22.900,-100.442,39.669)
OP2: (-21.434,-100.451,37.615)
C3': (-23.543,-104.006,35.578)
C1': (-25.046,-105.475,36.621)
C5': (-22.505,-103.184,37.776)
O4': (-24.289,-104.788,37.593)
C8: (-27.001,-104.147,37.526)
O2': (-23.511,-106.369,35.028)
C6: (-29.717,-104.742,35.422)
C5: (-28.543,-104.608,36.165)
C4: (-27.442,-105.289,35.762)
P: (-22.759,-100.646,38.229)
C4': (-23.087,-104.307,36.977)
C2': (-24.356,-105.252,35.278)
C2: (-28.533,-106.134,34.058)
N1: (-29.679,-105.539,34.356)
N3: (-27.380,-106.085,34.699)
N6: (-30.877,-104.144,35.710)
N7: (-28.251,-103.903,37.293)
N9: (-26.435,-104.977,36.634)
O5': (-23.348,-102.063,37.820)
O3': (-22.486,-103.783,34.671)
OP2: (-21.434,-100.451,37.615)
C3': (-23.543,-104.006,35.578)
C1': (-25.046,-105.475,36.621)
C5': (-22.505,-103.184,37.776)
O4': (-24.289,-104.788,37.593)
C8: (-27.001,-104.147,37.526)
O2': (-23.511,-106.369,35.028)
C6: (-29.717,-104.742,35.422)
C5: (-28.543,-104.608,36.165)
C4: (-27.442,-105.289,35.762)
P: (-22.759,-100.646,38.229)
C4': (-23.087,-104.307,36.977)
C2': (-24.356,-105.252,35.278)
C2: (-28.533,-106.134,34.058)
N1: (-29.679,-105.539,34.356)
N3: (-27.380,-106.085,34.699)
N6: (-30.877,-104.144,35.710)
N7: (-28.251,-103.903,37.293)
N9: (-26.435,-104.977,36.634)
O5': (-23.348,-102.063,37.820)
O3': (-22.486,-103.783,34.671)
C4: (-28.349,-109.024,28.310)
N3: (-28.314,-107.940,29.126)
OP1: (-22.812,-113.933,31.135)
OP2: (-24.591,-113.753,29.346)
C2: (-27.439,-107.749,30.151)
C1': (-25.584,-108.387,31.497)
C3': (-25.325,-110.209,32.931)
O5': (-24.026,-111.773,30.771)
O4': (-24.343,-108.987,31.228)
C5': (-23.255,-111.086,31.735)
P: (-23.514,-113.126,30.124)
C4': (-24.002,-109.902,32.289)
C2': (-26.050,-108.890,32.842)
O2': (-25.566,-108.005,33.834)
N1: (-26.520,-108.711,30.405)
O4: (-29.192,-109.065,27.424)
O2: (-27.475,-106.778,30.851)
C6: (-26.483,-109.815,29.610)
C5: (-27.350,-110.006,28.607)
O3': (-25.178,-110.658,34.244)
N3: (-28.314,-107.940,29.126)
OP1: (-22.812,-113.933,31.135)
OP2: (-24.591,-113.753,29.346)
C2: (-27.439,-107.749,30.151)
C1': (-25.584,-108.387,31.497)
C3': (-25.325,-110.209,32.931)
O5': (-24.026,-111.773,30.771)
O4': (-24.343,-108.987,31.228)
C5': (-23.255,-111.086,31.735)
P: (-23.514,-113.126,30.124)
C4': (-24.002,-109.902,32.289)
C2': (-26.050,-108.890,32.842)
O2': (-25.566,-108.005,33.834)
N1: (-26.520,-108.711,30.405)
O4: (-29.192,-109.065,27.424)
O2: (-27.475,-106.778,30.851)
C6: (-26.483,-109.815,29.610)
C5: (-27.350,-110.006,28.607)
O3': (-25.178,-110.658,34.244)
Image (generated by PyMOL):