ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A196:A212

Extra

PDB:
ATOM 1 O3' C A 195 -18.669 -6.805 -78.836 1.00 54.14 O
ATOM 2 P A A 196 -18.283 -7.699 -80.115 1.00 57.01 P
ATOM 3 OP1 A A 196 -19.042 -8.976 -80.021 1.00 96.43 O
ATOM 4 OP2 A A 196 -16.803 -7.733 -80.266 1.00 98.40 O
ATOM 5 O5' A A 196 -18.898 -6.886 -81.336 1.00 76.82 O
ATOM 6 C5' A A 196 -18.516 -5.524 -81.575 1.00 77.14 C
ATOM 7 C4' A A 196 -19.680 -4.748 -82.124 1.00 78.01 C
ATOM 8 O4' A A 196 -19.314 -3.357 -82.248 1.00 79.88 O
ATOM 9 C3' A A 196 -20.123 -5.182 -83.508 1.00 77.67 C
ATOM 10 O3' A A 196 -21.090 -6.218 -83.360 1.00 77.42 O
ATOM 11 C2' A A 196 -20.726 -3.910 -84.100 1.00 78.06 C
ATOM 12 O2' A A 196 -22.093 -3.762 -83.777 1.00 77.36 O
ATOM 13 C1' A A 196 -19.917 -2.810 -83.401 1.00 78.66 C
ATOM 14 N9 A A 196 -18.876 -2.148 -84.189 1.00117.54 N
ATOM 15 C8 A A 196 -17.608 -2.593 -84.472 1.00117.49 C
ATOM 16 N7 A A 196 -16.890 -1.740 -85.160 1.00117.85 N
ATOM 17 C5 A A 196 -17.745 -0.667 -85.358 1.00118.72 C
ATOM 18 C6 A A 196 -17.583 0.564 -86.020 1.00121.61 C
ATOM 19 N6 A A 196 -16.454 0.936 -86.624 1.00123.96 N
ATOM 20 N1 A A 196 -18.635 1.412 -86.040 1.00121.44 N
ATOM 21 C2 A A 196 -19.768 1.040 -85.430 1.00120.96 C
ATOM 22 N3 A A 196 -20.042 -0.088 -84.774 1.00119.80 N
ATOM 23 C4 A A 196 -18.976 -0.909 -84.774 1.00118.30 C
ATOM 24 P A A 197 -21.332 -7.267 -84.547 1.00101.15 P
ATOM 25 OP1 A A 197 -22.128 -8.389 -83.983 1.00135.10 O
ATOM 26 OP2 A A 197 -20.026 -7.550 -85.196 1.00135.17 O
ATOM 27 O5' A A 197 -22.242 -6.470 -85.582 1.00 73.32 O
TER

ATOM 1 O3' C B 211 -29.801 -1.941 -86.479 1.00 57.76 O
ATOM 2 P U B 212 -29.374 -1.155 -85.156 1.00 84.77 P
ATOM 3 OP1 U B 212 -29.650 -2.051 -84.008 1.00 82.15 O
ATOM 4 OP2 U B 212 -29.964 0.211 -85.184 1.00 81.92 O
ATOM 5 O5' U B 212 -27.800 -1.025 -85.313 1.00 32.71 O
ATOM 6 C5' U B 212 -26.956 -2.172 -85.187 1.00 31.37 C
ATOM 7 C4' U B 212 -25.526 -1.738 -85.055 1.00 30.89 C
ATOM 8 O4' U B 212 -25.048 -1.226 -86.324 1.00 30.24 O
ATOM 9 C3' U B 212 -25.301 -0.598 -84.074 1.00 31.49 C
ATOM 10 O3' U B 212 -25.210 -1.049 -82.743 1.00 33.37 O
ATOM 11 C2' U B 212 -24.011 0.039 -84.575 1.00 30.77 C
ATOM 12 O2' U B 212 -22.842 -0.615 -84.111 1.00 30.54 O
ATOM 13 C1' U B 212 -24.153 -0.142 -86.091 1.00 29.17 C
ATOM 14 N1 U B 212 -24.669 1.062 -86.769 1.00 47.23 N
ATOM 15 C2 U B 212 -23.785 2.112 -86.976 1.00 47.91 C
ATOM 16 O2 U B 212 -22.613 2.088 -86.611 1.00 48.75 O
ATOM 17 N3 U B 212 -24.324 3.200 -87.619 1.00 47.10 N
ATOM 18 C4 U B 212 -25.623 3.355 -88.058 1.00 48.35 C
ATOM 19 O4 U B 212 -25.965 4.430 -88.556 1.00 50.16 O
ATOM 20 C5 U B 212 -26.475 2.232 -87.809 1.00 46.66 C
ATOM 21 C6 U B 212 -25.985 1.153 -87.189 1.00 47.58 C
ATOM 22 P U B 213 -25.543 -0.036 -81.555 1.00 84.63 P
ATOM 23 OP1 U B 213 -25.546 -0.828 -80.300 1.00 84.75 O
ATOM 24 OP2 U B 213 -26.747 0.749 -81.941 1.00 81.20 O
ATOM 25 O5' U B 213 -24.273 0.918 -81.527 1.00 63.09 O
TER

Atoms:
OP1: (-19.042,-8.976,-80.021)
OP2: (-16.803,-7.733,-80.266)
C3': (-20.123,-5.182,-83.508)
C1': (-19.917,-2.810,-83.401)
C5': (-18.516,-5.524,-81.575)
O4': (-19.314,-3.357,-82.248)
C8: (-17.608,-2.593,-84.472)
O2': (-22.093,-3.762,-83.777)
C6: (-17.583,0.564,-86.020)
C5: (-17.745,-0.667,-85.358)
C4: (-18.976,-0.909,-84.774)
P: (-18.283,-7.699,-80.115)
C4': (-19.680,-4.748,-82.124)
C2': (-20.726,-3.910,-84.100)
C2: (-19.768,1.040,-85.430)
N1: (-18.635,1.412,-86.040)
N3: (-20.042,-0.088,-84.774)
N6: (-16.454,0.936,-86.624)
N7: (-16.890,-1.740,-85.160)
N9: (-18.876,-2.148,-84.189)
O5': (-18.898,-6.886,-81.336)
O3': (-21.090,-6.218,-83.360)
C4: (-25.623,3.355,-88.058)
N3: (-24.324,3.200,-87.619)
OP1: (-29.650,-2.051,-84.008)
OP2: (-29.964,0.211,-85.184)
C2: (-23.785,2.112,-86.976)
C1': (-24.153,-0.142,-86.091)
C3': (-25.301,-0.598,-84.074)
O5': (-27.800,-1.025,-85.313)
O4': (-25.048,-1.226,-86.324)
C5': (-26.956,-2.172,-85.187)
P: (-29.374,-1.155,-85.156)
C4': (-25.526,-1.738,-85.055)
C2': (-24.011,0.039,-84.575)
O2': (-22.842,-0.615,-84.111)
N1: (-24.669,1.062,-86.769)
O4: (-25.965,4.430,-88.556)
O2: (-22.613,2.088,-86.611)
C6: (-25.985,1.153,-87.189)
C5: (-26.475,2.232,-87.809)
O3': (-25.210,-1.049,-82.743)
Image (generated by PyMOL):
PyMOL image
show in jmol