Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01037:02024
Extra
PDB:
ATOM 1 O3' G A1036 31.923 104.690 114.686 1.00 39.60 O
ATOM 2 P A A1037 32.898 105.936 115.024 1.00 41.30 P
ATOM 3 OP1 A A1037 34.305 105.516 114.800 1.00 39.53 O
ATOM 4 OP2 A A1037 32.487 106.425 116.371 1.00 41.60 O
ATOM 5 O5' A A1037 32.535 107.069 113.966 1.00 37.54 O
ATOM 6 C5' A A1037 31.269 107.750 114.000 1.00 35.37 C
ATOM 7 C4' A A1037 31.455 109.195 113.618 1.00 35.29 C
ATOM 8 O4' A A1037 32.120 109.908 114.687 1.00 37.65 O
ATOM 9 C3' A A1037 32.343 109.405 112.408 1.00 35.35 C
ATOM 10 O3' A A1037 31.564 109.277 111.232 1.00 35.48 O
ATOM 11 C2' A A1037 32.878 110.817 112.621 1.00 35.67 C
ATOM 12 O2' A A1037 31.951 111.817 112.260 1.00 35.93 O
ATOM 13 C1' A A1037 33.022 110.857 114.141 1.00 35.91 C
ATOM 14 N9 A A1037 34.351 110.586 114.692 1.00 36.37 N
ATOM 15 C8 A A1037 34.884 109.376 115.076 1.00 36.21 C
ATOM 16 N7 A A1037 36.042 109.480 115.681 1.00 36.33 N
ATOM 17 C5 A A1037 36.304 110.844 115.666 1.00 35.39 C
ATOM 18 C6 A A1037 37.357 111.611 116.189 1.00 34.36 C
ATOM 19 N6 A A1037 38.366 111.101 116.887 1.00 34.10 N
ATOM 20 N1 A A1037 37.327 112.944 115.982 1.00 35.52 N
ATOM 21 C2 A A1037 36.294 113.465 115.310 1.00 35.35 C
ATOM 22 N3 A A1037 35.234 112.854 114.793 1.00 35.59 N
ATOM 23 C4 A A1037 35.296 111.530 115.013 1.00 35.41 C
ATOM 24 P A A1038 32.034 108.285 110.070 1.00 34.71 P
ATOM 25 OP1 A A1038 30.828 107.987 109.259 1.00 35.11 O
ATOM 26 OP2 A A1038 32.806 107.169 110.676 1.00 35.31 O
ATOM 27 O5' A A1038 33.037 109.166 109.205 1.00 33.85 O
TER
ATOM 1 O3' C B2023 33.351 116.224 105.952 1.00 33.91 O
ATOM 2 P U B2024 32.321 116.718 107.077 1.00 35.99 P
ATOM 3 OP1 U B2024 31.037 116.053 106.718 1.00 35.02 O
ATOM 4 OP2 U B2024 32.375 118.199 107.210 1.00 33.98 O
ATOM 5 O5' U B2024 32.880 116.069 108.418 1.00 33.28 O
ATOM 6 C5' U B2024 32.739 114.663 108.656 1.00 35.06 C
ATOM 7 C4' U B2024 33.265 114.307 110.022 1.00 35.36 C
ATOM 8 O4' U B2024 34.713 114.294 110.018 1.00 36.75 O
ATOM 9 C3' U B2024 32.907 115.269 111.139 1.00 34.46 C
ATOM 10 O3' U B2024 31.597 115.032 111.610 1.00 35.25 O
ATOM 11 C2' U B2024 33.972 114.949 112.174 1.00 34.43 C
ATOM 12 O2' U B2024 33.708 113.734 112.841 1.00 31.55 O
ATOM 13 C1' U B2024 35.195 114.751 111.276 1.00 36.14 C
ATOM 14 N1 U B2024 35.962 115.989 111.047 1.00 36.58 N
ATOM 15 C2 U B2024 36.921 116.355 111.979 1.00 36.57 C
ATOM 16 O2 U B2024 37.159 115.714 112.987 1.00 37.19 O
ATOM 17 N3 U B2024 37.601 117.505 111.679 1.00 37.87 N
ATOM 18 C4 U B2024 37.433 118.308 110.570 1.00 38.74 C
ATOM 19 O4 U B2024 38.188 119.266 110.396 1.00 39.43 O
ATOM 20 C5 U B2024 36.419 117.871 109.667 1.00 38.80 C
ATOM 21 C6 U B2024 35.736 116.760 109.928 1.00 37.38 C
ATOM 22 P G B2025 30.780 116.213 112.328 1.00 37.56 P
ATOM 23 OP1 G B2025 29.418 115.662 112.509 1.00 36.90 O
ATOM 24 OP2 G B2025 30.967 117.498 111.604 1.00 34.35 O
ATOM 25 O5' G B2025 31.479 116.342 113.753 1.00 36.22 O
TER
ATOM 2 P A A1037 32.898 105.936 115.024 1.00 41.30 P
ATOM 3 OP1 A A1037 34.305 105.516 114.800 1.00 39.53 O
ATOM 4 OP2 A A1037 32.487 106.425 116.371 1.00 41.60 O
ATOM 5 O5' A A1037 32.535 107.069 113.966 1.00 37.54 O
ATOM 6 C5' A A1037 31.269 107.750 114.000 1.00 35.37 C
ATOM 7 C4' A A1037 31.455 109.195 113.618 1.00 35.29 C
ATOM 8 O4' A A1037 32.120 109.908 114.687 1.00 37.65 O
ATOM 9 C3' A A1037 32.343 109.405 112.408 1.00 35.35 C
ATOM 10 O3' A A1037 31.564 109.277 111.232 1.00 35.48 O
ATOM 11 C2' A A1037 32.878 110.817 112.621 1.00 35.67 C
ATOM 12 O2' A A1037 31.951 111.817 112.260 1.00 35.93 O
ATOM 13 C1' A A1037 33.022 110.857 114.141 1.00 35.91 C
ATOM 14 N9 A A1037 34.351 110.586 114.692 1.00 36.37 N
ATOM 15 C8 A A1037 34.884 109.376 115.076 1.00 36.21 C
ATOM 16 N7 A A1037 36.042 109.480 115.681 1.00 36.33 N
ATOM 17 C5 A A1037 36.304 110.844 115.666 1.00 35.39 C
ATOM 18 C6 A A1037 37.357 111.611 116.189 1.00 34.36 C
ATOM 19 N6 A A1037 38.366 111.101 116.887 1.00 34.10 N
ATOM 20 N1 A A1037 37.327 112.944 115.982 1.00 35.52 N
ATOM 21 C2 A A1037 36.294 113.465 115.310 1.00 35.35 C
ATOM 22 N3 A A1037 35.234 112.854 114.793 1.00 35.59 N
ATOM 23 C4 A A1037 35.296 111.530 115.013 1.00 35.41 C
ATOM 24 P A A1038 32.034 108.285 110.070 1.00 34.71 P
ATOM 25 OP1 A A1038 30.828 107.987 109.259 1.00 35.11 O
ATOM 26 OP2 A A1038 32.806 107.169 110.676 1.00 35.31 O
ATOM 27 O5' A A1038 33.037 109.166 109.205 1.00 33.85 O
TER
ATOM 1 O3' C B2023 33.351 116.224 105.952 1.00 33.91 O
ATOM 2 P U B2024 32.321 116.718 107.077 1.00 35.99 P
ATOM 3 OP1 U B2024 31.037 116.053 106.718 1.00 35.02 O
ATOM 4 OP2 U B2024 32.375 118.199 107.210 1.00 33.98 O
ATOM 5 O5' U B2024 32.880 116.069 108.418 1.00 33.28 O
ATOM 6 C5' U B2024 32.739 114.663 108.656 1.00 35.06 C
ATOM 7 C4' U B2024 33.265 114.307 110.022 1.00 35.36 C
ATOM 8 O4' U B2024 34.713 114.294 110.018 1.00 36.75 O
ATOM 9 C3' U B2024 32.907 115.269 111.139 1.00 34.46 C
ATOM 10 O3' U B2024 31.597 115.032 111.610 1.00 35.25 O
ATOM 11 C2' U B2024 33.972 114.949 112.174 1.00 34.43 C
ATOM 12 O2' U B2024 33.708 113.734 112.841 1.00 31.55 O
ATOM 13 C1' U B2024 35.195 114.751 111.276 1.00 36.14 C
ATOM 14 N1 U B2024 35.962 115.989 111.047 1.00 36.58 N
ATOM 15 C2 U B2024 36.921 116.355 111.979 1.00 36.57 C
ATOM 16 O2 U B2024 37.159 115.714 112.987 1.00 37.19 O
ATOM 17 N3 U B2024 37.601 117.505 111.679 1.00 37.87 N
ATOM 18 C4 U B2024 37.433 118.308 110.570 1.00 38.74 C
ATOM 19 O4 U B2024 38.188 119.266 110.396 1.00 39.43 O
ATOM 20 C5 U B2024 36.419 117.871 109.667 1.00 38.80 C
ATOM 21 C6 U B2024 35.736 116.760 109.928 1.00 37.38 C
ATOM 22 P G B2025 30.780 116.213 112.328 1.00 37.56 P
ATOM 23 OP1 G B2025 29.418 115.662 112.509 1.00 36.90 O
ATOM 24 OP2 G B2025 30.967 117.498 111.604 1.00 34.35 O
ATOM 25 O5' G B2025 31.479 116.342 113.753 1.00 36.22 O
TER
Atoms:
OP1: (34.305,105.516,114.800)
OP2: (32.487,106.425,116.371)
C3': (32.343,109.405,112.408)
C1': (33.022,110.857,114.141)
C5': (31.269,107.750,114.000)
O4': (32.120,109.908,114.687)
C8: (34.884,109.376,115.076)
O2': (31.951,111.817,112.260)
C6: (37.357,111.611,116.189)
C5: (36.304,110.844,115.666)
C4: (35.296,111.530,115.013)
P: (32.898,105.936,115.024)
C4': (31.455,109.195,113.618)
C2': (32.878,110.817,112.621)
C2: (36.294,113.465,115.310)
N1: (37.327,112.944,115.982)
N3: (35.234,112.854,114.793)
N6: (38.366,111.101,116.887)
N7: (36.042,109.480,115.681)
N9: (34.351,110.586,114.692)
O5': (32.535,107.069,113.966)
O3': (31.564,109.277,111.232)
OP2: (32.487,106.425,116.371)
C3': (32.343,109.405,112.408)
C1': (33.022,110.857,114.141)
C5': (31.269,107.750,114.000)
O4': (32.120,109.908,114.687)
C8: (34.884,109.376,115.076)
O2': (31.951,111.817,112.260)
C6: (37.357,111.611,116.189)
C5: (36.304,110.844,115.666)
C4: (35.296,111.530,115.013)
P: (32.898,105.936,115.024)
C4': (31.455,109.195,113.618)
C2': (32.878,110.817,112.621)
C2: (36.294,113.465,115.310)
N1: (37.327,112.944,115.982)
N3: (35.234,112.854,114.793)
N6: (38.366,111.101,116.887)
N7: (36.042,109.480,115.681)
N9: (34.351,110.586,114.692)
O5': (32.535,107.069,113.966)
O3': (31.564,109.277,111.232)
C4: (37.433,118.308,110.570)
N3: (37.601,117.505,111.679)
OP1: (31.037,116.053,106.718)
OP2: (32.375,118.199,107.210)
C2: (36.921,116.355,111.979)
C1': (35.195,114.751,111.276)
C3': (32.907,115.269,111.139)
O5': (32.880,116.069,108.418)
O4': (34.713,114.294,110.018)
C5': (32.739,114.663,108.656)
P: (32.321,116.718,107.077)
C4': (33.265,114.307,110.022)
C2': (33.972,114.949,112.174)
O2': (33.708,113.734,112.841)
N1: (35.962,115.989,111.047)
O4: (38.188,119.266,110.396)
O2: (37.159,115.714,112.987)
C6: (35.736,116.760,109.928)
C5: (36.419,117.871,109.667)
O3': (31.597,115.032,111.610)
N3: (37.601,117.505,111.679)
OP1: (31.037,116.053,106.718)
OP2: (32.375,118.199,107.210)
C2: (36.921,116.355,111.979)
C1': (35.195,114.751,111.276)
C3': (32.907,115.269,111.139)
O5': (32.880,116.069,108.418)
O4': (34.713,114.294,110.018)
C5': (32.739,114.663,108.656)
P: (32.321,116.718,107.077)
C4': (33.265,114.307,110.022)
C2': (33.972,114.949,112.174)
O2': (33.708,113.734,112.841)
N1: (35.962,115.989,111.047)
O4: (38.188,119.266,110.396)
O2: (37.159,115.714,112.987)
C6: (35.736,116.760,109.928)
C5: (36.419,117.871,109.667)
O3': (31.597,115.032,111.610)
Image (generated by PyMOL):