ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01888:02073

Extra

PDB:
ATOM 1 O3' G A1887 117.436 94.349 54.509 1.00 87.92 O
ATOM 2 P A A1888 117.161 95.210 55.849 1.00 87.31 P
ATOM 3 OP1 A A1888 118.432 95.904 56.201 1.00 87.35 O
ATOM 4 OP2 A A1888 116.514 94.334 56.858 1.00 86.90 O
ATOM 5 O5' A A1888 116.111 96.323 55.380 1.00 83.84 O
ATOM 6 C5' A A1888 116.502 97.356 54.439 1.00 79.27 C
ATOM 7 C4' A A1888 115.555 98.544 54.492 1.00 75.24 C
ATOM 8 O4' A A1888 114.319 98.259 53.791 1.00 75.02 O
ATOM 9 C3' A A1888 115.108 99.043 55.857 1.00 72.30 C
ATOM 10 O3' A A1888 116.112 99.843 56.462 1.00 69.69 O
ATOM 11 C2' A A1888 113.863 99.850 55.503 1.00 72.59 C
ATOM 12 O2' A A1888 114.158 101.125 54.969 1.00 71.98 O
ATOM 13 C1' A A1888 113.260 99.001 54.382 1.00 73.74 C
ATOM 14 N9 A A1888 112.233 98.066 54.846 1.00 73.79 N
ATOM 15 C8 A A1888 112.374 96.742 55.198 1.00 74.46 C
ATOM 16 N7 A A1888 111.254 96.173 55.578 1.00 74.34 N
ATOM 17 C5 A A1888 110.314 97.190 55.473 1.00 73.10 C
ATOM 18 C6 A A1888 108.938 97.233 55.738 1.00 71.78 C
ATOM 19 N6 A A1888 108.239 96.197 56.201 1.00 70.89 N
ATOM 20 N1 A A1888 108.295 98.397 55.517 1.00 72.72 N
ATOM 21 C2 A A1888 108.996 99.445 55.071 1.00 73.17 C
ATOM 22 N3 A A1888 110.292 99.533 54.794 1.00 73.59 N
ATOM 23 C4 A A1888 110.903 98.358 55.018 1.00 73.38 C
ATOM 24 P A A1889 116.342 99.773 58.051 1.00 69.38 P
ATOM 25 OP1 A A1889 117.679 100.364 58.336 1.00 68.44 O
ATOM 26 OP2 A A1889 116.036 98.399 58.525 1.00 69.16 O
ATOM 27 O5' A A1889 115.223 100.742 58.638 1.00 68.28 O
TER

ATOM 1 O3' C B2072 112.337 108.903 56.767 1.00 55.61 O
ATOM 2 P U B2073 112.722 108.602 55.237 1.00 56.55 P
ATOM 3 OP1 U B2073 114.200 108.733 55.186 1.00 58.42 O
ATOM 4 OP2 U B2073 111.872 109.441 54.346 1.00 53.97 O
ATOM 5 O5' U B2073 112.339 107.067 55.016 1.00 56.25 O
ATOM 6 C5' U B2073 113.088 106.018 55.665 1.00 57.68 C
ATOM 7 C4' U B2073 112.445 104.667 55.423 1.00 59.29 C
ATOM 8 O4' U B2073 111.092 104.673 55.956 1.00 59.36 O
ATOM 9 C3' U B2073 112.260 104.225 53.977 1.00 60.11 C
ATOM 10 O3' U B2073 113.445 103.677 53.397 1.00 61.95 O
ATOM 11 C2' U B2073 111.156 103.186 54.114 1.00 59.40 C
ATOM 12 O2' U B2073 111.618 101.951 54.626 1.00 60.45 O
ATOM 13 C1' U B2073 110.255 103.859 55.148 1.00 56.87 C
ATOM 14 N1 U B2073 109.256 104.719 54.496 1.00 54.75 N
ATOM 15 C2 U B2073 108.132 104.109 53.977 1.00 53.11 C
ATOM 16 O2 U B2073 107.923 102.917 54.074 1.00 52.15 O
ATOM 17 N3 U B2073 107.260 104.950 53.338 1.00 53.06 N
ATOM 18 C4 U B2073 107.389 106.311 53.172 1.00 53.84 C
ATOM 19 O4 U B2073 106.550 106.917 52.505 1.00 54.44 O
ATOM 20 C5 U B2073 108.566 106.877 53.758 1.00 53.34 C
ATOM 21 C6 U B2073 109.436 106.084 54.384 1.00 53.74 C
ATOM 22 P G B2074 113.746 103.904 51.830 1.00 62.10 P
ATOM 23 OP1 G B2074 115.216 103.807 51.671 1.00 63.92 O
ATOM 24 OP2 G B2074 113.042 105.126 51.371 1.00 62.50 O
ATOM 25 O5' G B2074 113.075 102.649 51.115 1.00 60.42 O
TER

Atoms:
OP1: (118.432,95.904,56.201)
OP2: (116.514,94.334,56.858)
C3': (115.108,99.043,55.857)
C1': (113.260,99.001,54.382)
C5': (116.502,97.356,54.439)
O4': (114.319,98.259,53.791)
C8: (112.374,96.742,55.198)
O2': (114.158,101.125,54.969)
C6: (108.938,97.233,55.738)
C5: (110.314,97.190,55.473)
C4: (110.903,98.358,55.018)
P: (117.161,95.210,55.849)
C4': (115.555,98.544,54.492)
C2': (113.863,99.850,55.503)
C2: (108.996,99.445,55.071)
N1: (108.295,98.397,55.517)
N3: (110.292,99.533,54.794)
N6: (108.239,96.197,56.201)
N7: (111.254,96.173,55.578)
N9: (112.233,98.066,54.846)
O5': (116.111,96.323,55.380)
O3': (116.112,99.843,56.462)
C4: (107.389,106.311,53.172)
N3: (107.260,104.950,53.338)
OP1: (114.200,108.733,55.186)
OP2: (111.872,109.441,54.346)
C2: (108.132,104.109,53.977)
C1': (110.255,103.859,55.148)
C3': (112.260,104.225,53.977)
O5': (112.339,107.067,55.016)
O4': (111.092,104.673,55.956)
C5': (113.088,106.018,55.665)
P: (112.722,108.602,55.237)
C4': (112.445,104.667,55.423)
C2': (111.156,103.186,54.114)
O2': (111.618,101.951,54.626)
N1: (109.256,104.719,54.496)
O4: (106.550,106.917,52.505)
O2: (107.923,102.917,54.074)
C6: (109.436,106.084,54.384)
C5: (108.566,106.877,53.758)
O3': (113.445,103.677,53.397)
Image (generated by PyMOL):
PyMOL image
show in jmol