ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1LNG:B62:B78

Extra

PDB:
ATOM 1 O3' C A 61 35.219 1.849 55.461 1.00 29.44 O
ATOM 2 P C A 62 35.242 1.570 53.895 1.00 28.77 P
ATOM 3 OP1 C A 62 35.505 2.867 53.243 1.00 29.67 O
ATOM 4 OP2 C A 62 34.083 0.750 53.487 1.00 27.52 O
ATOM 5 O5' C A 62 36.504 0.588 53.716 1.00 27.34 O
ATOM 6 C5' C A 62 37.845 0.994 53.956 1.00 22.30 C
ATOM 7 C4' C A 62 38.700 -0.248 53.896 1.00 19.39 C
ATOM 8 O4' C A 62 38.153 -1.231 54.806 1.00 17.91 O
ATOM 9 C3' C A 62 38.729 -0.943 52.540 1.00 17.47 C
ATOM 10 O3' C A 62 39.802 -0.419 51.807 1.00 14.50 O
ATOM 11 C2' C A 62 39.078 -2.363 52.949 1.00 17.96 C
ATOM 12 O2' C A 62 40.455 -2.477 53.199 1.00 18.91 O
ATOM 13 C1' C A 62 38.347 -2.523 54.269 1.00 17.09 C
ATOM 14 N1 C A 62 37.073 -3.256 54.132 1.00 16.26 N
ATOM 15 C2 C A 62 37.153 -4.640 54.181 1.00 16.91 C
ATOM 16 O2 C A 62 38.269 -5.134 54.336 1.00 17.80 O
ATOM 17 N3 C A 62 36.015 -5.383 54.078 1.00 17.11 N
ATOM 18 C4 C A 62 34.843 -4.781 53.899 1.00 14.90 C
ATOM 19 N4 C A 62 33.762 -5.554 53.804 1.00 15.23 N
ATOM 20 C5 C A 62 34.744 -3.362 53.831 1.00 15.24 C
ATOM 21 C6 C A 62 35.866 -2.639 53.962 1.00 16.43 C
ATOM 22 P A A 63 40.010 -0.773 50.280 1.00 14.45 P
ATOM 23 OP1 A A 63 39.849 0.464 49.519 1.00 14.69 O
ATOM 24 OP2 A A 63 39.335 -2.045 49.923 1.00 16.25 O
ATOM 25 O5' A A 63 41.580 -1.068 50.240 1.00 16.11 O
TER

ATOM 1 O3' G B 77 33.149 -9.967 52.488 1.00 20.95 O
ATOM 2 P C B 78 33.711 -9.990 53.987 1.00 24.81 P
ATOM 3 OP1 C B 78 32.763 -10.839 54.744 1.00 25.65 O
ATOM 4 OP2 C B 78 33.991 -8.607 54.437 1.00 22.21 O
ATOM 5 O5' C B 78 35.127 -10.730 53.875 1.00 23.70 O
ATOM 6 C5' C B 78 35.271 -12.132 53.681 1.00 24.77 C
ATOM 7 C4' C B 78 36.718 -12.548 53.411 1.00 24.45 C
ATOM 8 O4' C B 78 37.204 -11.932 52.193 1.00 24.22 O
ATOM 9 C3' C B 78 37.757 -12.081 54.403 1.00 25.48 C
ATOM 10 O3' C B 78 37.758 -12.836 55.585 1.00 26.59 O
ATOM 11 C2' C B 78 39.023 -12.341 53.604 1.00 25.78 C
ATOM 12 O2' C B 78 39.293 -13.729 53.510 1.00 28.55 O
ATOM 13 C1' C B 78 38.609 -11.764 52.263 1.00 23.90 C
ATOM 14 N1 C B 78 38.931 -10.309 52.154 1.00 22.65 N
ATOM 15 C2 C B 78 40.227 -9.920 51.807 1.00 21.48 C
ATOM 16 O2 C B 78 41.078 -10.785 51.601 1.00 23.61 O
ATOM 17 N3 C B 78 40.526 -8.608 51.715 1.00 21.40 N
ATOM 18 C4 C B 78 39.575 -7.700 51.952 1.00 21.40 C
ATOM 19 N4 C B 78 39.912 -6.413 51.860 1.00 21.09 N
ATOM 20 C5 C B 78 38.245 -8.071 52.310 1.00 21.17 C
ATOM 21 C6 C B 78 37.969 -9.370 52.394 1.00 21.10 C
ATOM 22 P A B 79 38.031 -12.033 56.934 1.00 27.40 P
ATOM 23 OP1 A B 79 37.616 -12.850 58.090 1.00 27.84 O
ATOM 24 OP2 A B 79 37.453 -10.677 56.781 1.00 27.96 O
ATOM 25 O5' A B 79 39.606 -11.810 56.915 1.00 29.31 O
TER

Atoms:
C2: (37.153,-4.640,54.181)
OP1: (35.505,2.867,53.243)
OP2: (34.083,0.750,53.487)
C4: (34.843,-4.781,53.899)
O5': (36.504,0.588,53.716)
C3': (38.729,-0.943,52.540)
C1': (38.347,-2.523,54.269)
O4': (38.153,-1.231,54.806)
C5': (37.845,0.994,53.956)
P: (35.242,1.570,53.895)
O2: (38.269,-5.134,54.336)
C4': (38.700,-0.248,53.896)
C2': (39.078,-2.363,52.949)
O2': (40.455,-2.477,53.199)
N1: (37.073,-3.256,54.132)
N3: (36.015,-5.383,54.078)
N4: (33.762,-5.554,53.804)
C6: (35.866,-2.639,53.962)
C5: (34.744,-3.362,53.831)
O3': (39.802,-0.419,51.807)
C2: (40.227,-9.920,51.807)
OP1: (32.763,-10.839,54.744)
OP2: (33.991,-8.607,54.437)
C4: (39.575,-7.700,51.952)
O5': (35.127,-10.730,53.875)
C3': (37.757,-12.081,54.403)
C1': (38.609,-11.764,52.263)
O4': (37.204,-11.932,52.193)
C5': (35.271,-12.132,53.681)
P: (33.711,-9.990,53.987)
O2: (41.078,-10.785,51.601)
C4': (36.718,-12.548,53.411)
C2': (39.023,-12.341,53.604)
O2': (39.293,-13.729,53.510)
N1: (38.931,-10.309,52.154)
N3: (40.526,-8.608,51.715)
N4: (39.912,-6.413,51.860)
C6: (37.969,-9.370,52.394)
C5: (38.245,-8.071,52.310)
O3': (37.758,-12.836,55.585)
Image (generated by PyMOL):
PyMOL image
show in jmol