Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C17:D21
Extra
PDB:
ATOM 1 O3' C A 16 16.428 -8.077 12.961 1.00 26.93 O
ATOM 2 P C A 17 17.693 -8.247 13.923 1.00 25.98 P
ATOM 3 OP1 C A 17 18.880 -8.385 13.047 1.00 26.19 O
ATOM 4 OP2 C A 17 17.379 -9.319 14.902 1.00 28.29 O
ATOM 5 O5' C A 17 17.752 -6.847 14.688 1.00 27.30 O
ATOM 6 C5' C A 17 17.961 -5.633 13.968 1.00 24.44 C
ATOM 7 C4' C A 17 17.714 -4.426 14.853 1.00 21.00 C
ATOM 8 O4' C A 17 16.311 -4.313 15.184 1.00 18.95 O
ATOM 9 C3' C A 17 18.417 -4.396 16.192 1.00 19.07 C
ATOM 10 O3' C A 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 11 C2' C A 17 17.571 -3.384 16.974 1.00 18.69 C
ATOM 12 O2' C A 17 17.918 -2.044 16.684 1.00 21.55 O
ATOM 13 C1' C A 17 16.171 -3.619 16.403 1.00 16.84 C
ATOM 14 N1 C A 17 15.186 -4.335 17.232 1.00 15.20 N
ATOM 15 C2 C A 17 14.388 -3.604 18.116 1.00 12.91 C
ATOM 16 O2 C A 17 14.605 -2.401 18.251 1.00 14.33 O
ATOM 17 N3 C A 17 13.403 -4.228 18.802 1.00 11.01 N
ATOM 18 C4 C A 17 13.216 -5.538 18.649 1.00 13.29 C
ATOM 19 N4 C A 17 12.217 -6.115 19.330 1.00 11.52 N
ATOM 20 C5 C A 17 14.043 -6.320 17.787 1.00 13.51 C
ATOM 21 C6 C A 17 15.011 -5.684 17.106 1.00 14.48 C
ATOM 22 P G A 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 23 OP1 G A 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 24 OP2 G A 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 25 O5' G A 18 21.224 -4.178 18.033 1.00 19.90 O
TER
ATOM 1 O3' A B 20 11.170 -4.918 24.044 1.00 16.82 O
ATOM 2 P C B 21 9.839 -4.955 23.149 1.00 17.60 P
ATOM 3 OP1 C B 21 10.224 -4.618 21.746 1.00 18.39 O
ATOM 4 OP2 C B 21 8.815 -4.144 23.844 1.00 17.51 O
ATOM 5 O5' C B 21 9.382 -6.481 23.206 1.00 20.02 O
ATOM 6 C5' C B 21 10.116 -7.489 22.518 1.00 20.16 C
ATOM 7 C4' C B 21 9.607 -8.858 22.893 1.00 19.71 C
ATOM 8 O4' C B 21 9.868 -9.098 24.299 1.00 19.09 O
ATOM 9 C3' C B 21 8.109 -9.070 22.774 1.00 21.92 C
ATOM 10 O3' C B 21 7.729 -9.337 21.428 1.00 26.47 O
ATOM 11 C2' C B 21 7.922 -10.276 23.683 1.00 21.32 C
ATOM 12 O2' C B 21 8.401 -11.490 23.133 1.00 24.36 O
ATOM 13 C1' C B 21 8.820 -9.882 24.850 1.00 19.20 C
ATOM 14 N1 C B 21 8.089 -9.069 25.838 1.00 16.97 N
ATOM 15 C2 C B 21 7.235 -9.717 26.716 1.00 17.10 C
ATOM 16 O2 C B 21 7.125 -10.954 26.635 1.00 18.30 O
ATOM 17 N3 C B 21 6.548 -8.995 27.629 1.00 17.87 N
ATOM 18 C4 C B 21 6.695 -7.672 27.678 1.00 17.10 C
ATOM 19 N4 C B 21 5.986 -7.001 28.588 1.00 16.40 N
ATOM 20 C5 C B 21 7.569 -6.980 26.794 1.00 15.16 C
ATOM 21 C6 C B 21 8.238 -7.711 25.896 1.00 15.60 C
ATOM 22 P U B 22 6.310 -8.813 20.868 1.00 26.08 P
ATOM 23 OP1 U B 22 6.226 -9.343 19.490 1.00 28.50 O
ATOM 24 OP2 U B 22 6.150 -7.363 21.104 1.00 27.02 O
ATOM 25 O5' U B 22 5.234 -9.568 21.758 1.00 25.15 O
TER
ATOM 2 P C A 17 17.693 -8.247 13.923 1.00 25.98 P
ATOM 3 OP1 C A 17 18.880 -8.385 13.047 1.00 26.19 O
ATOM 4 OP2 C A 17 17.379 -9.319 14.902 1.00 28.29 O
ATOM 5 O5' C A 17 17.752 -6.847 14.688 1.00 27.30 O
ATOM 6 C5' C A 17 17.961 -5.633 13.968 1.00 24.44 C
ATOM 7 C4' C A 17 17.714 -4.426 14.853 1.00 21.00 C
ATOM 8 O4' C A 17 16.311 -4.313 15.184 1.00 18.95 O
ATOM 9 C3' C A 17 18.417 -4.396 16.192 1.00 19.07 C
ATOM 10 O3' C A 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 11 C2' C A 17 17.571 -3.384 16.974 1.00 18.69 C
ATOM 12 O2' C A 17 17.918 -2.044 16.684 1.00 21.55 O
ATOM 13 C1' C A 17 16.171 -3.619 16.403 1.00 16.84 C
ATOM 14 N1 C A 17 15.186 -4.335 17.232 1.00 15.20 N
ATOM 15 C2 C A 17 14.388 -3.604 18.116 1.00 12.91 C
ATOM 16 O2 C A 17 14.605 -2.401 18.251 1.00 14.33 O
ATOM 17 N3 C A 17 13.403 -4.228 18.802 1.00 11.01 N
ATOM 18 C4 C A 17 13.216 -5.538 18.649 1.00 13.29 C
ATOM 19 N4 C A 17 12.217 -6.115 19.330 1.00 11.52 N
ATOM 20 C5 C A 17 14.043 -6.320 17.787 1.00 13.51 C
ATOM 21 C6 C A 17 15.011 -5.684 17.106 1.00 14.48 C
ATOM 22 P G A 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 23 OP1 G A 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 24 OP2 G A 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 25 O5' G A 18 21.224 -4.178 18.033 1.00 19.90 O
TER
ATOM 1 O3' A B 20 11.170 -4.918 24.044 1.00 16.82 O
ATOM 2 P C B 21 9.839 -4.955 23.149 1.00 17.60 P
ATOM 3 OP1 C B 21 10.224 -4.618 21.746 1.00 18.39 O
ATOM 4 OP2 C B 21 8.815 -4.144 23.844 1.00 17.51 O
ATOM 5 O5' C B 21 9.382 -6.481 23.206 1.00 20.02 O
ATOM 6 C5' C B 21 10.116 -7.489 22.518 1.00 20.16 C
ATOM 7 C4' C B 21 9.607 -8.858 22.893 1.00 19.71 C
ATOM 8 O4' C B 21 9.868 -9.098 24.299 1.00 19.09 O
ATOM 9 C3' C B 21 8.109 -9.070 22.774 1.00 21.92 C
ATOM 10 O3' C B 21 7.729 -9.337 21.428 1.00 26.47 O
ATOM 11 C2' C B 21 7.922 -10.276 23.683 1.00 21.32 C
ATOM 12 O2' C B 21 8.401 -11.490 23.133 1.00 24.36 O
ATOM 13 C1' C B 21 8.820 -9.882 24.850 1.00 19.20 C
ATOM 14 N1 C B 21 8.089 -9.069 25.838 1.00 16.97 N
ATOM 15 C2 C B 21 7.235 -9.717 26.716 1.00 17.10 C
ATOM 16 O2 C B 21 7.125 -10.954 26.635 1.00 18.30 O
ATOM 17 N3 C B 21 6.548 -8.995 27.629 1.00 17.87 N
ATOM 18 C4 C B 21 6.695 -7.672 27.678 1.00 17.10 C
ATOM 19 N4 C B 21 5.986 -7.001 28.588 1.00 16.40 N
ATOM 20 C5 C B 21 7.569 -6.980 26.794 1.00 15.16 C
ATOM 21 C6 C B 21 8.238 -7.711 25.896 1.00 15.60 C
ATOM 22 P U B 22 6.310 -8.813 20.868 1.00 26.08 P
ATOM 23 OP1 U B 22 6.226 -9.343 19.490 1.00 28.50 O
ATOM 24 OP2 U B 22 6.150 -7.363 21.104 1.00 27.02 O
ATOM 25 O5' U B 22 5.234 -9.568 21.758 1.00 25.15 O
TER
Atoms:
C2: (14.388,-3.604,18.116)
OP1: (18.880,-8.385,13.047)
OP2: (17.379,-9.319,14.902)
C4: (13.216,-5.538,18.649)
O5': (17.752,-6.847,14.688)
C3': (18.417,-4.396,16.192)
C1': (16.171,-3.619,16.403)
O4': (16.311,-4.313,15.184)
C5': (17.961,-5.633,13.968)
P: (17.693,-8.247,13.923)
O2: (14.605,-2.401,18.251)
C4': (17.714,-4.426,14.853)
C2': (17.571,-3.384,16.974)
O2': (17.918,-2.044,16.684)
N1: (15.186,-4.335,17.232)
N3: (13.403,-4.228,18.802)
N4: (12.217,-6.115,19.330)
C6: (15.011,-5.684,17.106)
C5: (14.043,-6.320,17.787)
O3': (19.751,-3.936,15.989)
OP1: (18.880,-8.385,13.047)
OP2: (17.379,-9.319,14.902)
C4: (13.216,-5.538,18.649)
O5': (17.752,-6.847,14.688)
C3': (18.417,-4.396,16.192)
C1': (16.171,-3.619,16.403)
O4': (16.311,-4.313,15.184)
C5': (17.961,-5.633,13.968)
P: (17.693,-8.247,13.923)
O2: (14.605,-2.401,18.251)
C4': (17.714,-4.426,14.853)
C2': (17.571,-3.384,16.974)
O2': (17.918,-2.044,16.684)
N1: (15.186,-4.335,17.232)
N3: (13.403,-4.228,18.802)
N4: (12.217,-6.115,19.330)
C6: (15.011,-5.684,17.106)
C5: (14.043,-6.320,17.787)
O3': (19.751,-3.936,15.989)
C2: (7.235,-9.717,26.716)
OP1: (10.224,-4.618,21.746)
OP2: (8.815,-4.144,23.844)
C4: (6.695,-7.672,27.678)
O5': (9.382,-6.481,23.206)
C3': (8.109,-9.070,22.774)
C1': (8.820,-9.882,24.850)
O4': (9.868,-9.098,24.299)
C5': (10.116,-7.489,22.518)
P: (9.839,-4.955,23.149)
O2: (7.125,-10.954,26.635)
C4': (9.607,-8.858,22.893)
C2': (7.922,-10.276,23.683)
O2': (8.401,-11.490,23.133)
N1: (8.089,-9.069,25.838)
N3: (6.548,-8.995,27.629)
N4: (5.986,-7.001,28.588)
C6: (8.238,-7.711,25.896)
C5: (7.569,-6.980,26.794)
O3': (7.729,-9.337,21.428)
OP1: (10.224,-4.618,21.746)
OP2: (8.815,-4.144,23.844)
C4: (6.695,-7.672,27.678)
O5': (9.382,-6.481,23.206)
C3': (8.109,-9.070,22.774)
C1': (8.820,-9.882,24.850)
O4': (9.868,-9.098,24.299)
C5': (10.116,-7.489,22.518)
P: (9.839,-4.955,23.149)
O2: (7.125,-10.954,26.635)
C4': (9.607,-8.858,22.893)
C2': (7.922,-10.276,23.683)
O2': (8.401,-11.490,23.133)
N1: (8.089,-9.069,25.838)
N3: (6.548,-8.995,27.629)
N4: (5.986,-7.001,28.588)
C6: (8.238,-7.711,25.896)
C5: (7.569,-6.980,26.794)
O3': (7.729,-9.337,21.428)
Image (generated by PyMOL):