Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D17:C21
Extra
PDB:
ATOM 1 O3' C A 16 11.724 -12.237 38.625 1.00 19.05 O
ATOM 2 P C A 17 10.476 -12.235 37.634 1.00 19.24 P
ATOM 3 OP1 C A 17 9.309 -12.666 38.430 1.00 21.56 O
ATOM 4 OP2 C A 17 10.847 -12.991 36.420 1.00 17.94 O
ATOM 5 O5' C A 17 10.291 -10.690 37.280 1.00 19.28 O
ATOM 6 C5' C A 17 9.975 -9.745 38.303 1.00 15.44 C
ATOM 7 C4' C A 17 10.296 -8.326 37.863 1.00 14.21 C
ATOM 8 O4' C A 17 11.710 -8.158 37.618 1.00 13.26 O
ATOM 9 C3' C A 17 9.646 -7.808 36.594 1.00 13.30 C
ATOM 10 O3' C A 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 11 C2' C A 17 10.540 -6.623 36.225 1.00 12.16 C
ATOM 12 O2' C A 17 10.119 -5.437 36.866 1.00 14.46 O
ATOM 13 C1' C A 17 11.902 -7.046 36.782 1.00 8.27 C
ATOM 14 N1 C A 17 12.898 -7.398 35.776 1.00 6.82 N
ATOM 15 C2 C A 17 13.654 -6.380 35.219 1.00 6.22 C
ATOM 16 O2 C A 17 13.436 -5.217 35.577 1.00 11.17 O
ATOM 17 N3 C A 17 14.604 -6.681 34.304 1.00 6.94 N
ATOM 18 C4 C A 17 14.806 -7.952 33.946 1.00 7.41 C
ATOM 19 N4 C A 17 15.771 -8.204 33.053 1.00 4.66 N
ATOM 20 C5 C A 17 14.032 -9.019 34.494 1.00 6.15 C
ATOM 21 C6 C A 17 13.097 -8.699 35.396 1.00 7.53 C
ATOM 22 P G A 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 23 OP1 G A 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 24 OP2 G A 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 25 O5' G A 18 6.757 -7.004 35.031 1.00 13.92 O
TER
ATOM 1 O3' A B 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 2 P C B 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 3 OP1 C B 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 4 OP2 C B 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 5 O5' C B 21 18.526 -7.443 29.496 1.00 19.40 O
ATOM 6 C5' C B 21 17.778 -8.595 29.826 1.00 19.64 C
ATOM 7 C4' C B 21 18.364 -9.786 29.125 1.00 19.09 C
ATOM 8 O4' C B 21 18.170 -9.644 27.687 1.00 19.15 O
ATOM 9 C3' C B 21 19.868 -9.911 29.267 1.00 19.18 C
ATOM 10 O3' C B 21 20.234 -10.531 30.487 1.00 22.88 O
ATOM 11 C2' C B 21 20.214 -10.783 28.071 1.00 20.63 C
ATOM 12 O2' C B 21 19.952 -12.157 28.298 1.00 20.98 O
ATOM 13 C1' C B 21 19.281 -10.202 27.003 1.00 17.62 C
ATOM 14 N1 C B 21 19.956 -9.131 26.261 1.00 16.66 N
ATOM 15 C2 C B 21 20.772 -9.481 25.180 1.00 15.98 C
ATOM 16 O2 C B 21 20.865 -10.677 24.863 1.00 17.73 O
ATOM 17 N3 C B 21 21.438 -8.514 24.510 1.00 14.65 N
ATOM 18 C4 C B 21 21.311 -7.241 24.880 1.00 14.23 C
ATOM 19 N4 C B 21 21.993 -6.331 24.195 1.00 15.81 N
ATOM 20 C5 C B 21 20.475 -6.850 25.973 1.00 15.00 C
ATOM 21 C6 C B 21 19.819 -7.820 26.627 1.00 15.11 C
ATOM 22 P U B 22 21.717 -10.323 31.074 1.00 23.65 P
ATOM 23 OP1 U B 22 21.897 -11.265 32.206 1.00 28.09 O
ATOM 24 OP2 U B 22 21.924 -8.872 31.289 1.00 24.13 O
ATOM 25 O5' U B 22 22.697 -10.782 29.908 1.00 24.35 O
TER
ATOM 2 P C A 17 10.476 -12.235 37.634 1.00 19.24 P
ATOM 3 OP1 C A 17 9.309 -12.666 38.430 1.00 21.56 O
ATOM 4 OP2 C A 17 10.847 -12.991 36.420 1.00 17.94 O
ATOM 5 O5' C A 17 10.291 -10.690 37.280 1.00 19.28 O
ATOM 6 C5' C A 17 9.975 -9.745 38.303 1.00 15.44 C
ATOM 7 C4' C A 17 10.296 -8.326 37.863 1.00 14.21 C
ATOM 8 O4' C A 17 11.710 -8.158 37.618 1.00 13.26 O
ATOM 9 C3' C A 17 9.646 -7.808 36.594 1.00 13.30 C
ATOM 10 O3' C A 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 11 C2' C A 17 10.540 -6.623 36.225 1.00 12.16 C
ATOM 12 O2' C A 17 10.119 -5.437 36.866 1.00 14.46 O
ATOM 13 C1' C A 17 11.902 -7.046 36.782 1.00 8.27 C
ATOM 14 N1 C A 17 12.898 -7.398 35.776 1.00 6.82 N
ATOM 15 C2 C A 17 13.654 -6.380 35.219 1.00 6.22 C
ATOM 16 O2 C A 17 13.436 -5.217 35.577 1.00 11.17 O
ATOM 17 N3 C A 17 14.604 -6.681 34.304 1.00 6.94 N
ATOM 18 C4 C A 17 14.806 -7.952 33.946 1.00 7.41 C
ATOM 19 N4 C A 17 15.771 -8.204 33.053 1.00 4.66 N
ATOM 20 C5 C A 17 14.032 -9.019 34.494 1.00 6.15 C
ATOM 21 C6 C A 17 13.097 -8.699 35.396 1.00 7.53 C
ATOM 22 P G A 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 23 OP1 G A 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 24 OP2 G A 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 25 O5' G A 18 6.757 -7.004 35.031 1.00 13.92 O
TER
ATOM 1 O3' A B 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 2 P C B 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 3 OP1 C B 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 4 OP2 C B 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 5 O5' C B 21 18.526 -7.443 29.496 1.00 19.40 O
ATOM 6 C5' C B 21 17.778 -8.595 29.826 1.00 19.64 C
ATOM 7 C4' C B 21 18.364 -9.786 29.125 1.00 19.09 C
ATOM 8 O4' C B 21 18.170 -9.644 27.687 1.00 19.15 O
ATOM 9 C3' C B 21 19.868 -9.911 29.267 1.00 19.18 C
ATOM 10 O3' C B 21 20.234 -10.531 30.487 1.00 22.88 O
ATOM 11 C2' C B 21 20.214 -10.783 28.071 1.00 20.63 C
ATOM 12 O2' C B 21 19.952 -12.157 28.298 1.00 20.98 O
ATOM 13 C1' C B 21 19.281 -10.202 27.003 1.00 17.62 C
ATOM 14 N1 C B 21 19.956 -9.131 26.261 1.00 16.66 N
ATOM 15 C2 C B 21 20.772 -9.481 25.180 1.00 15.98 C
ATOM 16 O2 C B 21 20.865 -10.677 24.863 1.00 17.73 O
ATOM 17 N3 C B 21 21.438 -8.514 24.510 1.00 14.65 N
ATOM 18 C4 C B 21 21.311 -7.241 24.880 1.00 14.23 C
ATOM 19 N4 C B 21 21.993 -6.331 24.195 1.00 15.81 N
ATOM 20 C5 C B 21 20.475 -6.850 25.973 1.00 15.00 C
ATOM 21 C6 C B 21 19.819 -7.820 26.627 1.00 15.11 C
ATOM 22 P U B 22 21.717 -10.323 31.074 1.00 23.65 P
ATOM 23 OP1 U B 22 21.897 -11.265 32.206 1.00 28.09 O
ATOM 24 OP2 U B 22 21.924 -8.872 31.289 1.00 24.13 O
ATOM 25 O5' U B 22 22.697 -10.782 29.908 1.00 24.35 O
TER
Atoms:
C2: (13.654,-6.380,35.219)
OP1: (9.309,-12.666,38.430)
OP2: (10.847,-12.991,36.420)
C4: (14.806,-7.952,33.946)
O5': (10.291,-10.690,37.280)
C3': (9.646,-7.808,36.594)
C1': (11.902,-7.046,36.782)
O4': (11.710,-8.158,37.618)
C5': (9.975,-9.745,38.303)
P: (10.476,-12.235,37.634)
O2: (13.436,-5.217,35.577)
C4': (10.296,-8.326,37.863)
C2': (10.540,-6.623,36.225)
O2': (10.119,-5.437,36.866)
N1: (12.898,-7.398,35.776)
N3: (14.604,-6.681,34.304)
N4: (15.771,-8.204,33.053)
C6: (13.097,-8.699,35.396)
C5: (14.032,-9.019,34.494)
O3': (8.366,-7.300,36.943)
OP1: (9.309,-12.666,38.430)
OP2: (10.847,-12.991,36.420)
C4: (14.806,-7.952,33.946)
O5': (10.291,-10.690,37.280)
C3': (9.646,-7.808,36.594)
C1': (11.902,-7.046,36.782)
O4': (11.710,-8.158,37.618)
C5': (9.975,-9.745,38.303)
P: (10.476,-12.235,37.634)
O2: (13.436,-5.217,35.577)
C4': (10.296,-8.326,37.863)
C2': (10.540,-6.623,36.225)
O2': (10.119,-5.437,36.866)
N1: (12.898,-7.398,35.776)
N3: (14.604,-6.681,34.304)
N4: (15.771,-8.204,33.053)
C6: (13.097,-8.699,35.396)
C5: (14.032,-9.019,34.494)
O3': (8.366,-7.300,36.943)
C2: (20.772,-9.481,25.180)
OP1: (17.638,-6.118,31.382)
OP2: (19.090,-5.020,29.583)
C4: (21.311,-7.241,24.880)
O5': (18.526,-7.443,29.496)
C3': (19.868,-9.911,29.267)
C1': (19.281,-10.202,27.003)
O4': (18.170,-9.644,27.687)
C5': (17.778,-8.595,29.826)
P: (18.058,-6.006,29.969)
O2: (20.865,-10.677,24.863)
C4': (18.364,-9.786,29.125)
C2': (20.214,-10.783,28.071)
O2': (19.952,-12.157,28.298)
N1: (19.956,-9.131,26.261)
N3: (21.438,-8.514,24.510)
N4: (21.993,-6.331,24.195)
C6: (19.819,-7.820,26.627)
C5: (20.475,-6.850,25.973)
O3': (20.234,-10.531,30.487)
OP1: (17.638,-6.118,31.382)
OP2: (19.090,-5.020,29.583)
C4: (21.311,-7.241,24.880)
O5': (18.526,-7.443,29.496)
C3': (19.868,-9.911,29.267)
C1': (19.281,-10.202,27.003)
O4': (18.170,-9.644,27.687)
C5': (17.778,-8.595,29.826)
P: (18.058,-6.006,29.969)
O2: (20.865,-10.677,24.863)
C4': (18.364,-9.786,29.125)
C2': (20.214,-10.783,28.071)
O2': (19.952,-12.157,28.298)
N1: (19.956,-9.131,26.261)
N3: (21.438,-8.514,24.510)
N4: (21.993,-6.331,24.195)
C6: (19.819,-7.820,26.627)
C5: (20.475,-6.850,25.973)
O3': (20.234,-10.531,30.487)
Image (generated by PyMOL):