ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q82:A553:A1223

Extra

PDB:
ATOM 1 O3' G A 552 -5.400 95.401 97.245 1.00 47.15 O
ATOM 2 P A A 553 -4.926 94.449 98.452 1.00 45.43 P
ATOM 3 OP1 A A 553 -5.515 93.126 98.211 1.00 44.90 O
ATOM 4 OP2 A A 553 -5.091 95.084 99.766 1.00 44.90 O
ATOM 5 O5' A A 553 -3.368 94.301 98.185 1.00 45.56 O
ATOM 6 C5' A A 553 -2.896 93.525 97.071 1.00 44.91 C
ATOM 7 C4' A A 553 -1.396 93.645 96.931 1.00 43.26 C
ATOM 8 O4' A A 553 -1.030 94.987 96.525 1.00 42.04 O
ATOM 9 C3' A A 553 -0.572 93.402 98.185 1.00 41.53 C
ATOM 10 O3' A A 553 -0.387 92.008 98.403 1.00 41.75 O
ATOM 11 C2' A A 553 0.741 94.074 97.821 1.00 40.85 C
ATOM 12 O2' A A 553 1.472 93.261 96.931 1.00 38.61 O
ATOM 13 C1' A A 553 0.245 95.301 97.054 1.00 41.59 C
ATOM 14 N9 A A 553 0.126 96.527 97.845 1.00 41.65 N
ATOM 15 C8 A A 553 -1.013 97.083 98.368 1.00 42.16 C
ATOM 16 N7 A A 553 -0.812 98.226 98.982 1.00 43.59 N
ATOM 17 C5 A A 553 0.554 98.432 98.863 1.00 42.88 C
ATOM 18 C6 A A 553 1.402 99.477 99.292 1.00 42.10 C
ATOM 19 N6 A A 553 0.987 100.562 99.932 1.00 40.77 N
ATOM 20 N1 A A 553 2.713 99.366 99.025 1.00 41.71 N
ATOM 21 C2 A A 553 3.140 98.291 98.363 1.00 43.65 C
ATOM 22 N3 A A 553 2.452 97.255 97.897 1.00 43.49 N
ATOM 23 C4 A A 553 1.148 97.384 98.182 1.00 42.59 C
ATOM 24 P A A 554 -0.542 91.392 99.878 1.00 42.99 P
ATOM 25 OP1 A A 554 -0.657 89.922 99.689 1.00 41.91 O
ATOM 26 OP2 A A 554 -1.597 92.126 100.618 1.00 42.70 O
ATOM 27 O5' A A 554 0.838 91.715 100.598 1.00 42.55 O
TER

ATOM 1 O3' C B1222 7.942 89.670 98.231 1.00 34.61 O
ATOM 2 P U B1223 7.615 89.853 96.680 1.00 35.00 P
ATOM 3 OP1 U B1223 6.755 88.740 96.329 1.00 36.81 O
ATOM 4 OP2 U B1223 8.841 90.051 95.920 1.00 33.36 O
ATOM 5 O5' U B1223 6.758 91.187 96.669 1.00 33.60 O
ATOM 6 C5' U B1223 5.476 91.221 97.311 1.00 34.31 C
ATOM 7 C4' U B1223 4.902 92.601 97.244 1.00 35.25 C
ATOM 8 O4' U B1223 5.737 93.494 98.020 1.00 36.50 O
ATOM 9 C3' U B1223 4.904 93.252 95.873 1.00 35.67 C
ATOM 10 O3' U B1223 3.881 92.799 95.009 1.00 36.63 O
ATOM 11 C2' U B1223 4.752 94.714 96.239 1.00 35.95 C
ATOM 12 O2' U B1223 3.434 95.039 96.611 1.00 35.06 O
ATOM 13 C1' U B1223 5.669 94.792 97.458 1.00 36.88 C
ATOM 14 N1 U B1223 7.023 95.229 97.092 1.00 38.74 N
ATOM 15 C2 U B1223 7.241 96.588 97.076 1.00 39.13 C
ATOM 16 O2 U B1223 6.369 97.395 97.356 1.00 39.06 O
ATOM 17 N3 U B1223 8.510 96.971 96.716 1.00 39.18 N
ATOM 18 C4 U B1223 9.561 96.150 96.369 1.00 39.06 C
ATOM 19 O4 U B1223 10.610 96.657 95.950 1.00 37.87 O
ATOM 20 C5 U B1223 9.260 94.741 96.421 1.00 38.72 C
ATOM 21 C6 U B1223 8.033 94.342 96.769 1.00 38.45 C
ATOM 22 P G B1224 4.026 93.034 93.429 1.00 36.72 P
ATOM 23 OP1 G B1224 3.127 92.069 92.785 1.00 36.30 O
ATOM 24 OP2 G B1224 5.461 93.022 93.093 1.00 38.13 O
ATOM 25 O5' G B1224 3.464 94.507 93.207 1.00 35.51 O
TER

Atoms:
OP1: (-5.515,93.126,98.211)
OP2: (-5.091,95.084,99.766)
C3': (-0.572,93.402,98.185)
C1': (0.245,95.301,97.054)
C5': (-2.896,93.525,97.071)
O4': (-1.030,94.987,96.525)
C8: (-1.013,97.083,98.368)
O2': (1.472,93.261,96.931)
C6: (1.402,99.477,99.292)
C5: (0.554,98.432,98.863)
C4: (1.148,97.384,98.182)
P: (-4.926,94.449,98.452)
C4': (-1.396,93.645,96.931)
C2': (0.741,94.074,97.821)
C2: (3.140,98.291,98.363)
N1: (2.713,99.366,99.025)
N3: (2.452,97.255,97.897)
N6: (0.987,100.562,99.932)
N7: (-0.812,98.226,98.982)
N9: (0.126,96.527,97.845)
O5': (-3.368,94.301,98.185)
O3': (-0.387,92.008,98.403)
C4: (9.561,96.150,96.369)
N3: (8.510,96.971,96.716)
OP1: (6.755,88.740,96.329)
OP2: (8.841,90.051,95.920)
C2: (7.241,96.588,97.076)
C1': (5.669,94.792,97.458)
C3': (4.904,93.252,95.873)
O5': (6.758,91.187,96.669)
O4': (5.737,93.494,98.020)
C5': (5.476,91.221,97.311)
P: (7.615,89.853,96.680)
C4': (4.902,92.601,97.244)
C2': (4.752,94.714,96.239)
O2': (3.434,95.039,96.611)
N1: (7.023,95.229,97.092)
O4: (10.610,96.657,95.950)
O2: (6.369,97.395,97.356)
C6: (8.033,94.342,96.769)
C5: (9.260,94.741,96.421)
O3': (3.881,92.799,95.009)
Image (generated by PyMOL):
PyMOL image
show in jmol