ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A1504:A1503

Extra

PDB:
ATOM 1 O3' U A1503 200.263 101.029 -22.373 1.00136.69 O
ATOM 2 P C A1504 199.274 101.750 -21.321 1.00 60.43 P
ATOM 3 OP1 C A1504 197.925 101.143 -21.541 1.00 39.69 O
ATOM 4 OP2 C A1504 199.443 103.232 -21.457 1.00 39.69 O
ATOM 5 O5' C A1504 199.794 101.281 -19.883 1.00 60.43 O
ATOM 6 C5' C A1504 199.751 99.891 -19.523 1.00 60.43 C
ATOM 7 C4' C A1504 200.655 99.599 -18.352 1.00 60.43 C
ATOM 8 O4' C A1504 201.992 100.113 -18.591 1.00 60.43 O
ATOM 9 C3' C A1504 200.285 100.215 -17.026 1.00 60.43 C
ATOM 10 O3' C A1504 199.242 99.512 -16.378 1.00 60.43 O
ATOM 11 C2' C A1504 201.597 100.125 -16.256 1.00 60.43 C
ATOM 12 O2' C A1504 201.816 98.822 -15.756 1.00 60.43 O
ATOM 13 C1' C A1504 202.627 100.384 -17.351 1.00 60.43 C
ATOM 14 N1 C A1504 203.216 101.751 -17.360 1.00 39.69 N
ATOM 15 C2 C A1504 204.072 102.146 -16.281 1.00 39.69 C
ATOM 16 O2 C A1504 204.293 101.356 -15.339 1.00 39.69 O
ATOM 17 N3 C A1504 204.633 103.369 -16.298 1.00 39.69 N
ATOM 18 C4 C A1504 204.391 104.196 -17.312 1.00 39.69 C
ATOM 19 N4 C A1504 204.992 105.390 -17.280 1.00 39.69 N
ATOM 20 C5 C A1504 203.527 103.836 -18.404 1.00 39.69 C
ATOM 21 C6 C A1504 202.966 102.622 -18.384 1.00 39.69 C
ATOM 22 P U A1505 198.166 100.337 -15.517 1.00 58.74 P
ATOM 23 OP1 U A1505 197.140 99.402 -15.035 1.00 41.65 O
ATOM 24 OP2 U A1505 197.760 101.523 -16.314 1.00 41.65 O
ATOM 25 O5' U A1505 198.998 100.884 -14.270 1.00 58.74 O
TER

ATOM 1 O3' U B1502 204.106 104.249 -26.196 1.00200.59 O
ATOM 2 P U B1503 202.830 104.827 -25.391 1.00136.69 P
ATOM 3 OP1 U B1503 201.703 104.967 -26.366 1.00 52.69 O
ATOM 4 OP2 U B1503 203.278 106.020 -24.608 1.00 52.69 O
ATOM 5 O5' U B1503 202.457 103.662 -24.362 1.00136.69 O
ATOM 6 C5' U B1503 201.922 102.411 -24.831 1.00136.69 C
ATOM 7 C4' U B1503 202.202 101.296 -23.845 1.00136.69 C
ATOM 8 O4' U B1503 203.633 101.169 -23.623 1.00136.69 O
ATOM 9 C3' U B1503 201.629 101.420 -22.441 1.00136.69 C
ATOM 10 O3' U B1503 200.263 101.029 -22.373 1.00136.69 O
ATOM 11 C2' U B1503 202.506 100.459 -21.646 1.00136.69 C
ATOM 12 O2' U B1503 202.081 99.115 -21.745 1.00136.69 O
ATOM 13 C1' U B1503 203.860 100.606 -22.342 1.00136.69 C
ATOM 14 N1 U B1503 204.797 101.444 -21.572 1.00 52.69 N
ATOM 15 C2 U B1503 205.378 100.856 -20.437 1.00 52.69 C
ATOM 16 O2 U B1503 205.187 99.686 -20.115 1.00 52.69 O
ATOM 17 N3 U B1503 206.190 101.681 -19.702 1.00 52.69 N
ATOM 18 C4 U B1503 206.497 102.992 -19.980 1.00 52.69 C
ATOM 19 O4 U B1503 207.228 103.603 -19.202 1.00 52.69 O
ATOM 20 C5 U B1503 205.892 103.526 -21.180 1.00 52.69 C
ATOM 21 C6 U B1503 205.085 102.753 -21.915 1.00 52.69 C
ATOM 22 P C B1504 199.274 101.750 -21.321 1.00 60.43 P
ATOM 23 OP1 C B1504 197.925 101.143 -21.541 1.00 39.69 O
ATOM 24 OP2 C B1504 199.443 103.232 -21.457 1.00 39.69 O
ATOM 25 O5' C B1504 199.794 101.281 -19.883 1.00 60.43 O
TER

Atoms:
C2: (204.072,102.146,-16.281)
OP1: (197.925,101.143,-21.541)
OP2: (199.443,103.232,-21.457)
C4: (204.391,104.196,-17.312)
O5': (199.794,101.281,-19.883)
C3': (200.285,100.215,-17.026)
C1': (202.627,100.384,-17.351)
O4': (201.992,100.113,-18.591)
C5': (199.751,99.891,-19.523)
P: (199.274,101.750,-21.321)
O2: (204.293,101.356,-15.339)
C4': (200.655,99.599,-18.352)
C2': (201.597,100.125,-16.256)
O2': (201.816,98.822,-15.756)
N1: (203.216,101.751,-17.360)
N3: (204.633,103.369,-16.298)
N4: (204.992,105.390,-17.280)
C6: (202.966,102.622,-18.384)
C5: (203.527,103.836,-18.404)
O3': (199.242,99.512,-16.378)
C4: (206.497,102.992,-19.980)
N3: (206.190,101.681,-19.702)
OP1: (201.703,104.967,-26.366)
OP2: (203.278,106.020,-24.608)
C2: (205.378,100.856,-20.437)
C1': (203.860,100.606,-22.342)
C3': (201.629,101.420,-22.441)
O5': (202.457,103.662,-24.362)
O4': (203.633,101.169,-23.623)
C5': (201.922,102.411,-24.831)
P: (202.830,104.827,-25.391)
C4': (202.202,101.296,-23.845)
C2': (202.506,100.459,-21.646)
O2': (202.081,99.115,-21.745)
N1: (204.797,101.444,-21.572)
O4: (207.228,103.603,-19.202)
O2: (205.187,99.686,-20.115)
C6: (205.085,102.753,-21.915)
C5: (205.892,103.526,-21.180)
O3': (200.263,101.029,-22.373)
Image (generated by PyMOL):
PyMOL image
show in jmol