Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01382:01381
Extra
PDB:
ATOM 1 O3' U A1381 57.167 183.574 63.568 1.00 62.71 O
ATOM 2 P C A1382 55.996 183.369 64.651 1.00 68.10 P
ATOM 3 OP1 C A1382 55.652 184.716 65.174 1.00 68.79 O
ATOM 4 OP2 C A1382 56.386 182.290 65.599 1.00 69.78 O
ATOM 5 O5' C A1382 54.753 182.862 63.797 1.00 66.83 O
ATOM 6 C5' C A1382 54.146 183.722 62.820 1.00 66.98 C
ATOM 7 C4' C A1382 53.138 182.958 62.005 1.00 66.29 C
ATOM 8 O4' C A1382 53.807 181.950 61.210 1.00 66.07 O
ATOM 9 C3' C A1382 52.132 182.178 62.824 1.00 66.28 C
ATOM 10 O3' C A1382 51.087 183.024 63.257 1.00 68.90 O
ATOM 11 C2' C A1382 51.676 181.114 61.842 1.00 65.82 C
ATOM 12 O2' C A1382 50.757 181.616 60.898 1.00 65.20 O
ATOM 13 C1' C A1382 52.995 180.790 61.134 1.00 66.43 C
ATOM 14 N1 C A1382 53.723 179.669 61.760 1.00 66.78 N
ATOM 15 C2 C A1382 53.392 178.364 61.394 1.00 65.86 C
ATOM 16 O2 C A1382 52.520 178.185 60.533 1.00 66.50 O
ATOM 17 N3 C A1382 54.030 177.330 61.985 1.00 66.29 N
ATOM 18 C4 C A1382 54.972 177.561 62.899 1.00 66.01 C
ATOM 19 N4 C A1382 55.569 176.510 63.460 1.00 66.31 N
ATOM 20 C5 C A1382 55.341 178.880 63.281 1.00 66.56 C
ATOM 21 C6 C A1382 54.699 179.895 62.693 1.00 66.65 C
ATOM 22 P A A1383 50.297 182.673 64.604 1.00 70.84 P
ATOM 23 OP1 A A1383 49.371 183.797 64.908 1.00 70.77 O
ATOM 24 OP2 A A1383 51.302 182.264 65.622 1.00 72.73 O
ATOM 25 O5' A A1383 49.438 181.397 64.186 1.00 70.13 O
TER
ATOM 1 O3' C B1380 62.733 181.326 64.612 1.00 52.65 O
ATOM 2 P U B1381 61.334 181.444 65.392 1.00 53.24 P
ATOM 3 OP1 U B1381 61.401 182.677 66.225 1.00 52.34 O
ATOM 4 OP2 U B1381 61.022 180.145 66.035 1.00 55.79 O
ATOM 5 O5' U B1381 60.267 181.646 64.229 1.00 54.46 O
ATOM 6 C5' U B1381 60.285 182.823 63.410 1.00 56.63 C
ATOM 7 C4' U B1381 59.150 182.791 62.415 1.00 57.75 C
ATOM 8 O4' U B1381 59.399 181.778 61.411 1.00 57.65 O
ATOM 9 C3' U B1381 57.778 182.443 62.962 1.00 58.71 C
ATOM 10 O3' U B1381 57.167 183.574 63.568 1.00 62.71 O
ATOM 11 C2' U B1381 57.058 181.988 61.701 1.00 58.22 C
ATOM 12 O2' U B1381 56.705 183.079 60.872 1.00 56.53 O
ATOM 13 C1' U B1381 58.169 181.216 60.989 1.00 57.94 C
ATOM 14 N1 U B1381 58.197 179.769 61.266 1.00 58.48 N
ATOM 15 C2 U B1381 57.359 178.948 60.524 1.00 59.17 C
ATOM 16 O2 U B1381 56.577 179.370 59.691 1.00 59.97 O
ATOM 17 N3 U B1381 57.469 177.607 60.798 1.00 59.01 N
ATOM 18 C4 U B1381 58.302 177.013 61.720 1.00 58.64 C
ATOM 19 O4 U B1381 58.335 175.783 61.800 1.00 57.64 O
ATOM 20 C5 U B1381 59.116 177.926 62.462 1.00 58.29 C
ATOM 21 C6 U B1381 59.038 179.236 62.217 1.00 58.05 C
ATOM 22 P C B1382 55.996 183.369 64.651 1.00 68.10 P
ATOM 23 OP1 C B1382 55.652 184.716 65.174 1.00 68.79 O
ATOM 24 OP2 C B1382 56.386 182.290 65.599 1.00 69.78 O
ATOM 25 O5' C B1382 54.753 182.862 63.797 1.00 66.83 O
TER
ATOM 2 P C A1382 55.996 183.369 64.651 1.00 68.10 P
ATOM 3 OP1 C A1382 55.652 184.716 65.174 1.00 68.79 O
ATOM 4 OP2 C A1382 56.386 182.290 65.599 1.00 69.78 O
ATOM 5 O5' C A1382 54.753 182.862 63.797 1.00 66.83 O
ATOM 6 C5' C A1382 54.146 183.722 62.820 1.00 66.98 C
ATOM 7 C4' C A1382 53.138 182.958 62.005 1.00 66.29 C
ATOM 8 O4' C A1382 53.807 181.950 61.210 1.00 66.07 O
ATOM 9 C3' C A1382 52.132 182.178 62.824 1.00 66.28 C
ATOM 10 O3' C A1382 51.087 183.024 63.257 1.00 68.90 O
ATOM 11 C2' C A1382 51.676 181.114 61.842 1.00 65.82 C
ATOM 12 O2' C A1382 50.757 181.616 60.898 1.00 65.20 O
ATOM 13 C1' C A1382 52.995 180.790 61.134 1.00 66.43 C
ATOM 14 N1 C A1382 53.723 179.669 61.760 1.00 66.78 N
ATOM 15 C2 C A1382 53.392 178.364 61.394 1.00 65.86 C
ATOM 16 O2 C A1382 52.520 178.185 60.533 1.00 66.50 O
ATOM 17 N3 C A1382 54.030 177.330 61.985 1.00 66.29 N
ATOM 18 C4 C A1382 54.972 177.561 62.899 1.00 66.01 C
ATOM 19 N4 C A1382 55.569 176.510 63.460 1.00 66.31 N
ATOM 20 C5 C A1382 55.341 178.880 63.281 1.00 66.56 C
ATOM 21 C6 C A1382 54.699 179.895 62.693 1.00 66.65 C
ATOM 22 P A A1383 50.297 182.673 64.604 1.00 70.84 P
ATOM 23 OP1 A A1383 49.371 183.797 64.908 1.00 70.77 O
ATOM 24 OP2 A A1383 51.302 182.264 65.622 1.00 72.73 O
ATOM 25 O5' A A1383 49.438 181.397 64.186 1.00 70.13 O
TER
ATOM 1 O3' C B1380 62.733 181.326 64.612 1.00 52.65 O
ATOM 2 P U B1381 61.334 181.444 65.392 1.00 53.24 P
ATOM 3 OP1 U B1381 61.401 182.677 66.225 1.00 52.34 O
ATOM 4 OP2 U B1381 61.022 180.145 66.035 1.00 55.79 O
ATOM 5 O5' U B1381 60.267 181.646 64.229 1.00 54.46 O
ATOM 6 C5' U B1381 60.285 182.823 63.410 1.00 56.63 C
ATOM 7 C4' U B1381 59.150 182.791 62.415 1.00 57.75 C
ATOM 8 O4' U B1381 59.399 181.778 61.411 1.00 57.65 O
ATOM 9 C3' U B1381 57.778 182.443 62.962 1.00 58.71 C
ATOM 10 O3' U B1381 57.167 183.574 63.568 1.00 62.71 O
ATOM 11 C2' U B1381 57.058 181.988 61.701 1.00 58.22 C
ATOM 12 O2' U B1381 56.705 183.079 60.872 1.00 56.53 O
ATOM 13 C1' U B1381 58.169 181.216 60.989 1.00 57.94 C
ATOM 14 N1 U B1381 58.197 179.769 61.266 1.00 58.48 N
ATOM 15 C2 U B1381 57.359 178.948 60.524 1.00 59.17 C
ATOM 16 O2 U B1381 56.577 179.370 59.691 1.00 59.97 O
ATOM 17 N3 U B1381 57.469 177.607 60.798 1.00 59.01 N
ATOM 18 C4 U B1381 58.302 177.013 61.720 1.00 58.64 C
ATOM 19 O4 U B1381 58.335 175.783 61.800 1.00 57.64 O
ATOM 20 C5 U B1381 59.116 177.926 62.462 1.00 58.29 C
ATOM 21 C6 U B1381 59.038 179.236 62.217 1.00 58.05 C
ATOM 22 P C B1382 55.996 183.369 64.651 1.00 68.10 P
ATOM 23 OP1 C B1382 55.652 184.716 65.174 1.00 68.79 O
ATOM 24 OP2 C B1382 56.386 182.290 65.599 1.00 69.78 O
ATOM 25 O5' C B1382 54.753 182.862 63.797 1.00 66.83 O
TER
Atoms:
C2: (53.392,178.364,61.394)
OP1: (55.652,184.716,65.174)
OP2: (56.386,182.290,65.599)
C4: (54.972,177.561,62.899)
O5': (54.753,182.862,63.797)
C3': (52.132,182.178,62.824)
C1': (52.995,180.790,61.134)
O4': (53.807,181.950,61.210)
C5': (54.146,183.722,62.820)
P: (55.996,183.369,64.651)
O2: (52.520,178.185,60.533)
C4': (53.138,182.958,62.005)
C2': (51.676,181.114,61.842)
O2': (50.757,181.616,60.898)
N1: (53.723,179.669,61.760)
N3: (54.030,177.330,61.985)
N4: (55.569,176.510,63.460)
C6: (54.699,179.895,62.693)
C5: (55.341,178.880,63.281)
O3': (51.087,183.024,63.257)
OP1: (55.652,184.716,65.174)
OP2: (56.386,182.290,65.599)
C4: (54.972,177.561,62.899)
O5': (54.753,182.862,63.797)
C3': (52.132,182.178,62.824)
C1': (52.995,180.790,61.134)
O4': (53.807,181.950,61.210)
C5': (54.146,183.722,62.820)
P: (55.996,183.369,64.651)
O2: (52.520,178.185,60.533)
C4': (53.138,182.958,62.005)
C2': (51.676,181.114,61.842)
O2': (50.757,181.616,60.898)
N1: (53.723,179.669,61.760)
N3: (54.030,177.330,61.985)
N4: (55.569,176.510,63.460)
C6: (54.699,179.895,62.693)
C5: (55.341,178.880,63.281)
O3': (51.087,183.024,63.257)
C4: (58.302,177.013,61.720)
N3: (57.469,177.607,60.798)
OP1: (61.401,182.677,66.225)
OP2: (61.022,180.145,66.035)
C2: (57.359,178.948,60.524)
C1': (58.169,181.216,60.989)
C3': (57.778,182.443,62.962)
O5': (60.267,181.646,64.229)
O4': (59.399,181.778,61.411)
C5': (60.285,182.823,63.410)
P: (61.334,181.444,65.392)
C4': (59.150,182.791,62.415)
C2': (57.058,181.988,61.701)
O2': (56.705,183.079,60.872)
N1: (58.197,179.769,61.266)
O4: (58.335,175.783,61.800)
O2: (56.577,179.370,59.691)
C6: (59.038,179.236,62.217)
C5: (59.116,177.926,62.462)
O3': (57.167,183.574,63.568)
N3: (57.469,177.607,60.798)
OP1: (61.401,182.677,66.225)
OP2: (61.022,180.145,66.035)
C2: (57.359,178.948,60.524)
C1': (58.169,181.216,60.989)
C3': (57.778,182.443,62.962)
O5': (60.267,181.646,64.229)
O4': (59.399,181.778,61.411)
C5': (60.285,182.823,63.410)
P: (61.334,181.444,65.392)
C4': (59.150,182.791,62.415)
C2': (57.058,181.988,61.701)
O2': (56.705,183.079,60.872)
N1: (58.197,179.769,61.266)
O4: (58.335,175.783,61.800)
O2: (56.577,179.370,59.691)
C6: (59.038,179.236,62.217)
C5: (59.116,177.926,62.462)
O3': (57.167,183.574,63.568)
Image (generated by PyMOL):