Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1563:A1345
Extra
PDB:
ATOM 1 O3' A A1562 -28.634 -17.175 32.629 1.00 0.01 O
ATOM 2 P A A1563 -27.465 -16.434 33.378 1.00 0.01 P
ATOM 3 OP1 A A1563 -28.003 -15.172 33.870 1.00 0.01 O
ATOM 4 OP2 A A1563 -26.318 -16.407 32.472 1.00 0.01 O
ATOM 5 O5' A A1563 -27.180 -17.404 34.581 1.00 0.01 O
ATOM 6 C5' A A1563 -28.117 -17.550 35.631 1.00 0.01 C
ATOM 7 C4' A A1563 -27.962 -18.879 36.309 1.00 0.01 C
ATOM 8 O4' A A1563 -27.882 -19.901 35.308 1.00 0.01 O
ATOM 9 C3' A A1563 -26.692 -19.083 37.116 1.00 0.01 C
ATOM 10 O3' A A1563 -26.754 -18.515 38.401 1.00 0.01 O
ATOM 11 C2' A A1563 -26.567 -20.587 37.144 1.00 0.01 C
ATOM 12 O2' A A1563 -27.459 -21.143 38.099 1.00 0.01 O
ATOM 13 C1' A A1563 -27.062 -20.948 35.756 1.00 0.01 C
ATOM 14 N9 A A1563 -25.979 -21.111 34.795 1.00 0.01 N
ATOM 15 C8 A A1563 -25.609 -20.187 33.892 1.00 0.01 C
ATOM 16 N7 A A1563 -24.671 -20.619 33.115 1.00 0.01 N
ATOM 17 C5 A A1563 -24.430 -21.920 33.525 1.00 0.01 C
ATOM 18 C6 A A1563 -23.537 -22.906 33.075 1.00 0.01 C
ATOM 19 N6 A A1563 -22.636 -22.763 32.071 1.00 0.01 N
ATOM 20 N1 A A1563 -23.597 -24.072 33.713 1.00 0.01 N
ATOM 21 C2 A A1563 -24.469 -24.216 34.699 1.00 0.01 C
ATOM 22 N3 A A1563 -25.338 -23.371 35.197 1.00 0.01 N
ATOM 23 C4 A A1563 -25.257 -22.229 34.554 1.00 0.01 C
ATOM 24 P A A1564 -25.581 -17.548 38.906 1.00 0.01 P
ATOM 25 OP1 A A1564 -26.223 -16.541 39.789 1.00 0.01 O
ATOM 26 OP2 A A1564 -24.844 -17.079 37.701 1.00 0.01 O
ATOM 27 O5' A A1564 -24.646 -18.515 39.757 1.00 0.01 O
TER
ATOM 1 O3' C B1344 -22.720 -25.427 42.061 1.00 0.01 O
ATOM 2 P U B1345 -23.901 -26.018 42.947 1.00 0.01 P
ATOM 3 OP1 U B1345 -24.122 -25.084 44.072 1.00 0.01 O
ATOM 4 OP2 U B1345 -23.578 -27.411 43.240 1.00 0.01 O
ATOM 5 O5' U B1345 -25.102 -25.962 41.951 1.00 0.01 O
ATOM 6 C5' U B1345 -25.681 -24.736 41.609 1.00 0.01 C
ATOM 7 C4' U B1345 -25.755 -24.584 40.135 1.00 0.01 C
ATOM 8 O4' U B1345 -24.724 -25.380 39.527 1.00 0.01 O
ATOM 9 C3' U B1345 -27.008 -25.089 39.467 1.00 0.01 C
ATOM 10 O3' U B1345 -28.102 -24.226 39.622 1.00 0.01 O
ATOM 11 C2' U B1345 -26.543 -25.200 38.040 1.00 0.01 C
ATOM 12 O2' U B1345 -26.436 -23.910 37.459 1.00 0.01 O
ATOM 13 C1' U B1345 -25.137 -25.760 38.239 1.00 0.01 C
ATOM 14 N1 U B1345 -25.125 -27.216 38.155 1.00 0.01 N
ATOM 15 C2 U B1345 -24.973 -27.780 36.906 1.00 0.01 C
ATOM 16 O2 U B1345 -24.815 -27.111 35.910 1.00 0.01 O
ATOM 17 N3 U B1345 -25.000 -29.151 36.866 1.00 0.01 N
ATOM 18 C4 U B1345 -25.168 -29.980 37.958 1.00 0.01 C
ATOM 19 O4 U B1345 -25.170 -31.193 37.826 1.00 0.01 O
ATOM 20 C5 U B1345 -25.328 -29.311 39.215 1.00 0.01 C
ATOM 21 C6 U B1345 -25.301 -27.974 39.269 1.00 0.01 C
ATOM 22 P A B1346 -29.580 -24.807 39.597 1.00 0.01 P
ATOM 23 OP1 A B1346 -30.482 -23.747 40.045 1.00 0.01 O
ATOM 24 OP2 A B1346 -29.551 -26.045 40.352 1.00 0.01 O
ATOM 25 O5' A B1346 -29.812 -25.097 38.059 1.00 0.01 O
TER
ATOM 2 P A A1563 -27.465 -16.434 33.378 1.00 0.01 P
ATOM 3 OP1 A A1563 -28.003 -15.172 33.870 1.00 0.01 O
ATOM 4 OP2 A A1563 -26.318 -16.407 32.472 1.00 0.01 O
ATOM 5 O5' A A1563 -27.180 -17.404 34.581 1.00 0.01 O
ATOM 6 C5' A A1563 -28.117 -17.550 35.631 1.00 0.01 C
ATOM 7 C4' A A1563 -27.962 -18.879 36.309 1.00 0.01 C
ATOM 8 O4' A A1563 -27.882 -19.901 35.308 1.00 0.01 O
ATOM 9 C3' A A1563 -26.692 -19.083 37.116 1.00 0.01 C
ATOM 10 O3' A A1563 -26.754 -18.515 38.401 1.00 0.01 O
ATOM 11 C2' A A1563 -26.567 -20.587 37.144 1.00 0.01 C
ATOM 12 O2' A A1563 -27.459 -21.143 38.099 1.00 0.01 O
ATOM 13 C1' A A1563 -27.062 -20.948 35.756 1.00 0.01 C
ATOM 14 N9 A A1563 -25.979 -21.111 34.795 1.00 0.01 N
ATOM 15 C8 A A1563 -25.609 -20.187 33.892 1.00 0.01 C
ATOM 16 N7 A A1563 -24.671 -20.619 33.115 1.00 0.01 N
ATOM 17 C5 A A1563 -24.430 -21.920 33.525 1.00 0.01 C
ATOM 18 C6 A A1563 -23.537 -22.906 33.075 1.00 0.01 C
ATOM 19 N6 A A1563 -22.636 -22.763 32.071 1.00 0.01 N
ATOM 20 N1 A A1563 -23.597 -24.072 33.713 1.00 0.01 N
ATOM 21 C2 A A1563 -24.469 -24.216 34.699 1.00 0.01 C
ATOM 22 N3 A A1563 -25.338 -23.371 35.197 1.00 0.01 N
ATOM 23 C4 A A1563 -25.257 -22.229 34.554 1.00 0.01 C
ATOM 24 P A A1564 -25.581 -17.548 38.906 1.00 0.01 P
ATOM 25 OP1 A A1564 -26.223 -16.541 39.789 1.00 0.01 O
ATOM 26 OP2 A A1564 -24.844 -17.079 37.701 1.00 0.01 O
ATOM 27 O5' A A1564 -24.646 -18.515 39.757 1.00 0.01 O
TER
ATOM 1 O3' C B1344 -22.720 -25.427 42.061 1.00 0.01 O
ATOM 2 P U B1345 -23.901 -26.018 42.947 1.00 0.01 P
ATOM 3 OP1 U B1345 -24.122 -25.084 44.072 1.00 0.01 O
ATOM 4 OP2 U B1345 -23.578 -27.411 43.240 1.00 0.01 O
ATOM 5 O5' U B1345 -25.102 -25.962 41.951 1.00 0.01 O
ATOM 6 C5' U B1345 -25.681 -24.736 41.609 1.00 0.01 C
ATOM 7 C4' U B1345 -25.755 -24.584 40.135 1.00 0.01 C
ATOM 8 O4' U B1345 -24.724 -25.380 39.527 1.00 0.01 O
ATOM 9 C3' U B1345 -27.008 -25.089 39.467 1.00 0.01 C
ATOM 10 O3' U B1345 -28.102 -24.226 39.622 1.00 0.01 O
ATOM 11 C2' U B1345 -26.543 -25.200 38.040 1.00 0.01 C
ATOM 12 O2' U B1345 -26.436 -23.910 37.459 1.00 0.01 O
ATOM 13 C1' U B1345 -25.137 -25.760 38.239 1.00 0.01 C
ATOM 14 N1 U B1345 -25.125 -27.216 38.155 1.00 0.01 N
ATOM 15 C2 U B1345 -24.973 -27.780 36.906 1.00 0.01 C
ATOM 16 O2 U B1345 -24.815 -27.111 35.910 1.00 0.01 O
ATOM 17 N3 U B1345 -25.000 -29.151 36.866 1.00 0.01 N
ATOM 18 C4 U B1345 -25.168 -29.980 37.958 1.00 0.01 C
ATOM 19 O4 U B1345 -25.170 -31.193 37.826 1.00 0.01 O
ATOM 20 C5 U B1345 -25.328 -29.311 39.215 1.00 0.01 C
ATOM 21 C6 U B1345 -25.301 -27.974 39.269 1.00 0.01 C
ATOM 22 P A B1346 -29.580 -24.807 39.597 1.00 0.01 P
ATOM 23 OP1 A B1346 -30.482 -23.747 40.045 1.00 0.01 O
ATOM 24 OP2 A B1346 -29.551 -26.045 40.352 1.00 0.01 O
ATOM 25 O5' A B1346 -29.812 -25.097 38.059 1.00 0.01 O
TER
Atoms:
OP1: (-28.003,-15.172,33.870)
OP2: (-26.318,-16.407,32.472)
C3': (-26.692,-19.083,37.116)
C1': (-27.062,-20.948,35.756)
C5': (-28.117,-17.550,35.631)
O4': (-27.882,-19.901,35.308)
C8: (-25.609,-20.187,33.892)
O2': (-27.459,-21.143,38.099)
C6: (-23.537,-22.906,33.075)
C5: (-24.430,-21.920,33.525)
C4: (-25.257,-22.229,34.554)
P: (-27.465,-16.434,33.378)
C4': (-27.962,-18.879,36.309)
C2': (-26.567,-20.587,37.144)
C2: (-24.469,-24.216,34.699)
N1: (-23.597,-24.072,33.713)
N3: (-25.338,-23.371,35.197)
N6: (-22.636,-22.763,32.071)
N7: (-24.671,-20.619,33.115)
N9: (-25.979,-21.111,34.795)
O5': (-27.180,-17.404,34.581)
O3': (-26.754,-18.515,38.401)
OP2: (-26.318,-16.407,32.472)
C3': (-26.692,-19.083,37.116)
C1': (-27.062,-20.948,35.756)
C5': (-28.117,-17.550,35.631)
O4': (-27.882,-19.901,35.308)
C8: (-25.609,-20.187,33.892)
O2': (-27.459,-21.143,38.099)
C6: (-23.537,-22.906,33.075)
C5: (-24.430,-21.920,33.525)
C4: (-25.257,-22.229,34.554)
P: (-27.465,-16.434,33.378)
C4': (-27.962,-18.879,36.309)
C2': (-26.567,-20.587,37.144)
C2: (-24.469,-24.216,34.699)
N1: (-23.597,-24.072,33.713)
N3: (-25.338,-23.371,35.197)
N6: (-22.636,-22.763,32.071)
N7: (-24.671,-20.619,33.115)
N9: (-25.979,-21.111,34.795)
O5': (-27.180,-17.404,34.581)
O3': (-26.754,-18.515,38.401)
C4: (-25.168,-29.980,37.958)
N3: (-25.000,-29.151,36.866)
OP1: (-24.122,-25.084,44.072)
OP2: (-23.578,-27.411,43.240)
C2: (-24.973,-27.780,36.906)
C1': (-25.137,-25.760,38.239)
C3': (-27.008,-25.089,39.467)
O5': (-25.102,-25.962,41.951)
O4': (-24.724,-25.380,39.527)
C5': (-25.681,-24.736,41.609)
P: (-23.901,-26.018,42.947)
C4': (-25.755,-24.584,40.135)
C2': (-26.543,-25.200,38.040)
O2': (-26.436,-23.910,37.459)
N1: (-25.125,-27.216,38.155)
O4: (-25.170,-31.193,37.826)
O2: (-24.815,-27.111,35.910)
C6: (-25.301,-27.974,39.269)
C5: (-25.328,-29.311,39.215)
O3': (-28.102,-24.226,39.622)
N3: (-25.000,-29.151,36.866)
OP1: (-24.122,-25.084,44.072)
OP2: (-23.578,-27.411,43.240)
C2: (-24.973,-27.780,36.906)
C1': (-25.137,-25.760,38.239)
C3': (-27.008,-25.089,39.467)
O5': (-25.102,-25.962,41.951)
O4': (-24.724,-25.380,39.527)
C5': (-25.681,-24.736,41.609)
P: (-23.901,-26.018,42.947)
C4': (-25.755,-24.584,40.135)
C2': (-26.543,-25.200,38.040)
O2': (-26.436,-23.910,37.459)
N1: (-25.125,-27.216,38.155)
O4: (-25.170,-31.193,37.826)
O2: (-24.815,-27.111,35.910)
C6: (-25.301,-27.974,39.269)
C5: (-25.328,-29.311,39.215)
O3': (-28.102,-24.226,39.622)
Image (generated by PyMOL):