Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01226:01225
Extra
PDB:
ATOM 1 O3' U A1225 2.059 97.526 85.021 1.00 49.69 O
ATOM 2 P C A1226 2.887 96.752 83.878 1.00 52.62 P
ATOM 3 OP1 C A1226 1.980 96.586 82.710 1.00 53.73 O
ATOM 4 OP2 C A1226 3.536 95.561 84.470 1.00 52.34 O
ATOM 5 O5' C A1226 4.049 97.764 83.474 1.00 52.38 O
ATOM 6 C5' C A1226 3.756 99.105 83.077 1.00 50.30 C
ATOM 7 C4' C A1226 5.018 99.935 83.062 1.00 50.52 C
ATOM 8 O4' C A1226 5.555 100.031 84.410 1.00 50.17 O
ATOM 9 C3' C A1226 6.195 99.419 82.241 1.00 49.18 C
ATOM 10 O3' C A1226 6.066 99.691 80.843 1.00 45.72 O
ATOM 11 C2' C A1226 7.347 100.194 82.860 1.00 49.84 C
ATOM 12 O2' C A1226 7.378 101.545 82.441 1.00 52.98 O
ATOM 13 C1' C A1226 6.967 100.156 84.343 1.00 51.12 C
ATOM 14 N1 C A1226 7.593 99.012 85.037 1.00 50.89 N
ATOM 15 C2 C A1226 8.927 99.135 85.472 1.00 48.48 C
ATOM 16 O2 C A1226 9.524 100.205 85.293 1.00 49.43 O
ATOM 17 N3 C A1226 9.522 98.087 86.075 1.00 46.79 N
ATOM 18 C4 C A1226 8.847 96.954 86.263 1.00 45.41 C
ATOM 19 N4 C A1226 9.479 95.948 86.860 1.00 43.75 N
ATOM 20 C5 C A1226 7.492 96.804 85.846 1.00 47.31 C
ATOM 21 C6 C A1226 6.909 97.846 85.244 1.00 48.76 C
ATOM 22 P C A1227 6.984 98.894 79.783 1.00 45.05 P
ATOM 23 OP1 C A1227 6.658 99.415 78.422 1.00 44.55 O
ATOM 24 OP2 C A1227 6.895 97.442 80.044 1.00 44.97 O
ATOM 25 O5' C A1227 8.472 99.334 80.152 1.00 45.60 O
TER
ATOM 1 O3' G B1224 0.961 94.445 90.238 1.00 47.99 O
ATOM 2 P U B1225 1.501 94.014 88.787 1.00 47.98 P
ATOM 3 OP1 U B1225 0.379 93.418 88.008 1.00 49.69 O
ATOM 4 OP2 U B1225 2.743 93.231 88.987 1.00 48.47 O
ATOM 5 O5' U B1225 1.886 95.393 88.100 1.00 49.73 O
ATOM 6 C5' U B1225 0.883 96.377 87.818 1.00 48.80 C
ATOM 7 C4' U B1225 1.531 97.681 87.426 1.00 50.03 C
ATOM 8 O4' U B1225 2.264 98.222 88.566 1.00 50.33 O
ATOM 9 C3' U B1225 2.589 97.608 86.333 1.00 48.35 C
ATOM 10 O3' U B1225 2.059 97.526 85.021 1.00 49.69 O
ATOM 11 C2' U B1225 3.341 98.906 86.567 1.00 49.04 C
ATOM 12 O2' U B1225 2.624 100.036 86.106 1.00 45.83 O
ATOM 13 C1' U B1225 3.410 98.925 88.097 1.00 50.31 C
ATOM 14 N1 U B1225 4.628 98.240 88.569 1.00 51.48 N
ATOM 15 C2 U B1225 5.807 98.969 88.581 1.00 50.41 C
ATOM 16 O2 U B1225 5.863 100.136 88.248 1.00 52.39 O
ATOM 17 N3 U B1225 6.916 98.280 88.996 1.00 50.17 N
ATOM 18 C4 U B1225 6.979 96.960 89.382 1.00 51.71 C
ATOM 19 O4 U B1225 8.066 96.475 89.710 1.00 49.47 O
ATOM 20 C5 U B1225 5.720 96.270 89.356 1.00 51.68 C
ATOM 21 C6 U B1225 4.615 96.919 88.966 1.00 50.77 C
ATOM 22 P C B1226 2.887 96.752 83.878 1.00 52.62 P
ATOM 23 OP1 C B1226 1.980 96.586 82.710 1.00 53.73 O
ATOM 24 OP2 C B1226 3.536 95.561 84.470 1.00 52.34 O
ATOM 25 O5' C B1226 4.049 97.764 83.474 1.00 52.38 O
TER
ATOM 2 P C A1226 2.887 96.752 83.878 1.00 52.62 P
ATOM 3 OP1 C A1226 1.980 96.586 82.710 1.00 53.73 O
ATOM 4 OP2 C A1226 3.536 95.561 84.470 1.00 52.34 O
ATOM 5 O5' C A1226 4.049 97.764 83.474 1.00 52.38 O
ATOM 6 C5' C A1226 3.756 99.105 83.077 1.00 50.30 C
ATOM 7 C4' C A1226 5.018 99.935 83.062 1.00 50.52 C
ATOM 8 O4' C A1226 5.555 100.031 84.410 1.00 50.17 O
ATOM 9 C3' C A1226 6.195 99.419 82.241 1.00 49.18 C
ATOM 10 O3' C A1226 6.066 99.691 80.843 1.00 45.72 O
ATOM 11 C2' C A1226 7.347 100.194 82.860 1.00 49.84 C
ATOM 12 O2' C A1226 7.378 101.545 82.441 1.00 52.98 O
ATOM 13 C1' C A1226 6.967 100.156 84.343 1.00 51.12 C
ATOM 14 N1 C A1226 7.593 99.012 85.037 1.00 50.89 N
ATOM 15 C2 C A1226 8.927 99.135 85.472 1.00 48.48 C
ATOM 16 O2 C A1226 9.524 100.205 85.293 1.00 49.43 O
ATOM 17 N3 C A1226 9.522 98.087 86.075 1.00 46.79 N
ATOM 18 C4 C A1226 8.847 96.954 86.263 1.00 45.41 C
ATOM 19 N4 C A1226 9.479 95.948 86.860 1.00 43.75 N
ATOM 20 C5 C A1226 7.492 96.804 85.846 1.00 47.31 C
ATOM 21 C6 C A1226 6.909 97.846 85.244 1.00 48.76 C
ATOM 22 P C A1227 6.984 98.894 79.783 1.00 45.05 P
ATOM 23 OP1 C A1227 6.658 99.415 78.422 1.00 44.55 O
ATOM 24 OP2 C A1227 6.895 97.442 80.044 1.00 44.97 O
ATOM 25 O5' C A1227 8.472 99.334 80.152 1.00 45.60 O
TER
ATOM 1 O3' G B1224 0.961 94.445 90.238 1.00 47.99 O
ATOM 2 P U B1225 1.501 94.014 88.787 1.00 47.98 P
ATOM 3 OP1 U B1225 0.379 93.418 88.008 1.00 49.69 O
ATOM 4 OP2 U B1225 2.743 93.231 88.987 1.00 48.47 O
ATOM 5 O5' U B1225 1.886 95.393 88.100 1.00 49.73 O
ATOM 6 C5' U B1225 0.883 96.377 87.818 1.00 48.80 C
ATOM 7 C4' U B1225 1.531 97.681 87.426 1.00 50.03 C
ATOM 8 O4' U B1225 2.264 98.222 88.566 1.00 50.33 O
ATOM 9 C3' U B1225 2.589 97.608 86.333 1.00 48.35 C
ATOM 10 O3' U B1225 2.059 97.526 85.021 1.00 49.69 O
ATOM 11 C2' U B1225 3.341 98.906 86.567 1.00 49.04 C
ATOM 12 O2' U B1225 2.624 100.036 86.106 1.00 45.83 O
ATOM 13 C1' U B1225 3.410 98.925 88.097 1.00 50.31 C
ATOM 14 N1 U B1225 4.628 98.240 88.569 1.00 51.48 N
ATOM 15 C2 U B1225 5.807 98.969 88.581 1.00 50.41 C
ATOM 16 O2 U B1225 5.863 100.136 88.248 1.00 52.39 O
ATOM 17 N3 U B1225 6.916 98.280 88.996 1.00 50.17 N
ATOM 18 C4 U B1225 6.979 96.960 89.382 1.00 51.71 C
ATOM 19 O4 U B1225 8.066 96.475 89.710 1.00 49.47 O
ATOM 20 C5 U B1225 5.720 96.270 89.356 1.00 51.68 C
ATOM 21 C6 U B1225 4.615 96.919 88.966 1.00 50.77 C
ATOM 22 P C B1226 2.887 96.752 83.878 1.00 52.62 P
ATOM 23 OP1 C B1226 1.980 96.586 82.710 1.00 53.73 O
ATOM 24 OP2 C B1226 3.536 95.561 84.470 1.00 52.34 O
ATOM 25 O5' C B1226 4.049 97.764 83.474 1.00 52.38 O
TER
Atoms:
C2: (8.927,99.135,85.472)
OP1: (1.980,96.586,82.710)
OP2: (3.536,95.561,84.470)
C4: (8.847,96.954,86.263)
O5': (4.049,97.764,83.474)
C3': (6.195,99.419,82.241)
C1': (6.967,100.156,84.343)
O4': (5.555,100.031,84.410)
C5': (3.756,99.105,83.077)
P: (2.887,96.752,83.878)
O2: (9.524,100.205,85.293)
C4': (5.018,99.935,83.062)
C2': (7.347,100.194,82.860)
O2': (7.378,101.545,82.441)
N1: (7.593,99.012,85.037)
N3: (9.522,98.087,86.075)
N4: (9.479,95.948,86.860)
C6: (6.909,97.846,85.244)
C5: (7.492,96.804,85.846)
O3': (6.066,99.691,80.843)
OP1: (1.980,96.586,82.710)
OP2: (3.536,95.561,84.470)
C4: (8.847,96.954,86.263)
O5': (4.049,97.764,83.474)
C3': (6.195,99.419,82.241)
C1': (6.967,100.156,84.343)
O4': (5.555,100.031,84.410)
C5': (3.756,99.105,83.077)
P: (2.887,96.752,83.878)
O2: (9.524,100.205,85.293)
C4': (5.018,99.935,83.062)
C2': (7.347,100.194,82.860)
O2': (7.378,101.545,82.441)
N1: (7.593,99.012,85.037)
N3: (9.522,98.087,86.075)
N4: (9.479,95.948,86.860)
C6: (6.909,97.846,85.244)
C5: (7.492,96.804,85.846)
O3': (6.066,99.691,80.843)
C4: (6.979,96.960,89.382)
N3: (6.916,98.280,88.996)
OP1: (0.379,93.418,88.008)
OP2: (2.743,93.231,88.987)
C2: (5.807,98.969,88.581)
C1': (3.410,98.925,88.097)
C3': (2.589,97.608,86.333)
O5': (1.886,95.393,88.100)
O4': (2.264,98.222,88.566)
C5': (0.883,96.377,87.818)
P: (1.501,94.014,88.787)
C4': (1.531,97.681,87.426)
C2': (3.341,98.906,86.567)
O2': (2.624,100.036,86.106)
N1: (4.628,98.240,88.569)
O4: (8.066,96.475,89.710)
O2: (5.863,100.136,88.248)
C6: (4.615,96.919,88.966)
C5: (5.720,96.270,89.356)
O3': (2.059,97.526,85.021)
N3: (6.916,98.280,88.996)
OP1: (0.379,93.418,88.008)
OP2: (2.743,93.231,88.987)
C2: (5.807,98.969,88.581)
C1': (3.410,98.925,88.097)
C3': (2.589,97.608,86.333)
O5': (1.886,95.393,88.100)
O4': (2.264,98.222,88.566)
C5': (0.883,96.377,87.818)
P: (1.501,94.014,88.787)
C4': (1.531,97.681,87.426)
C2': (3.341,98.906,86.567)
O2': (2.624,100.036,86.106)
N1: (4.628,98.240,88.569)
O4: (8.066,96.475,89.710)
O2: (5.863,100.136,88.248)
C6: (4.615,96.919,88.966)
C5: (5.720,96.270,89.356)
O3': (2.059,97.526,85.021)
Image (generated by PyMOL):