Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0522:02030
Extra
PDB:
ATOM 1 O3' U A 521 22.476 135.633 113.373 1.00 47.06 O
ATOM 2 P C A 522 21.760 135.192 112.010 1.00 50.94 P
ATOM 3 OP1 C A 522 21.218 136.425 111.390 1.00 53.18 O
ATOM 4 OP2 C A 522 20.871 134.009 112.220 1.00 48.52 O
ATOM 5 O5' C A 522 22.971 134.755 111.085 1.00 52.56 O
ATOM 6 C5' C A 522 23.547 133.455 111.209 1.00 55.52 C
ATOM 7 C4' C A 522 24.990 133.504 110.815 1.00 55.93 C
ATOM 8 O4' C A 522 25.673 134.463 111.646 1.00 57.08 O
ATOM 9 C3' C A 522 25.753 132.221 111.053 1.00 56.85 C
ATOM 10 O3' C A 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 11 C2' C A 522 27.199 132.712 111.104 1.00 57.86 C
ATOM 12 O2' C A 522 27.741 132.889 109.813 1.00 59.36 O
ATOM 13 C1' C A 522 27.035 134.103 111.731 1.00 57.62 C
ATOM 14 N1 C A 522 27.496 134.315 113.115 1.00 57.25 N
ATOM 15 C2 C A 522 28.534 135.223 113.335 1.00 55.91 C
ATOM 16 O2 C A 522 29.056 135.780 112.366 1.00 55.16 O
ATOM 17 N3 C A 522 28.946 135.468 114.594 1.00 57.50 N
ATOM 18 C4 C A 522 28.372 134.839 115.618 1.00 58.93 C
ATOM 19 N4 C A 522 28.819 135.120 116.846 1.00 59.75 N
ATOM 20 C5 C A 522 27.317 133.893 115.428 1.00 58.09 C
ATOM 21 C6 C A 522 26.916 133.662 114.170 1.00 57.27 C
ATOM 22 P G A 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 23 OP1 G A 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 24 OP2 G A 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 25 O5' G A 523 26.877 129.411 109.249 1.00 56.85 O
TER
ATOM 1 O3' A B2029 32.428 137.928 116.283 1.00 47.16 O
ATOM 2 P C B2030 31.139 138.624 116.943 1.00 48.67 P
ATOM 3 OP1 C B2030 31.614 139.744 117.802 1.00 47.01 O
ATOM 4 OP2 C B2030 30.272 137.555 117.534 1.00 46.21 O
ATOM 5 O5' C B2030 30.384 139.259 115.697 1.00 47.04 O
ATOM 6 C5' C B2030 29.528 138.449 114.875 1.00 47.49 C
ATOM 7 C4' C B2030 28.833 139.299 113.843 1.00 46.47 C
ATOM 8 O4' C B2030 28.034 140.323 114.496 1.00 46.22 O
ATOM 9 C3' C B2030 29.750 140.083 112.933 1.00 45.51 C
ATOM 10 O3' C B2030 30.233 139.263 111.881 1.00 45.96 O
ATOM 11 C2' C B2030 28.832 141.189 112.439 1.00 44.93 C
ATOM 12 O2' C B2030 27.956 140.716 111.439 1.00 45.81 O
ATOM 13 C1' C B2030 28.025 141.496 113.703 1.00 44.06 C
ATOM 14 N1 C B2030 28.559 142.614 114.505 1.00 42.46 N
ATOM 15 C2 C B2030 28.370 143.917 114.048 1.00 40.25 C
ATOM 16 O2 C B2030 27.761 144.098 113.003 1.00 40.24 O
ATOM 17 N3 C B2030 28.853 144.944 114.760 1.00 41.32 N
ATOM 18 C4 C B2030 29.497 144.719 115.904 1.00 43.54 C
ATOM 19 N4 C B2030 29.945 145.779 116.586 1.00 44.95 N
ATOM 20 C5 C B2030 29.708 143.402 116.402 1.00 42.82 C
ATOM 21 C6 C B2030 29.227 142.387 115.675 1.00 42.84 C
ATOM 22 P A B2031 31.553 139.698 111.077 1.00 47.65 P
ATOM 23 OP1 A B2031 31.998 138.519 110.302 1.00 49.13 O
ATOM 24 OP2 A B2031 32.493 140.344 112.031 1.00 48.10 O
ATOM 25 O5' A B2031 31.036 140.810 110.057 1.00 47.89 O
TER
ATOM 2 P C A 522 21.760 135.192 112.010 1.00 50.94 P
ATOM 3 OP1 C A 522 21.218 136.425 111.390 1.00 53.18 O
ATOM 4 OP2 C A 522 20.871 134.009 112.220 1.00 48.52 O
ATOM 5 O5' C A 522 22.971 134.755 111.085 1.00 52.56 O
ATOM 6 C5' C A 522 23.547 133.455 111.209 1.00 55.52 C
ATOM 7 C4' C A 522 24.990 133.504 110.815 1.00 55.93 C
ATOM 8 O4' C A 522 25.673 134.463 111.646 1.00 57.08 O
ATOM 9 C3' C A 522 25.753 132.221 111.053 1.00 56.85 C
ATOM 10 O3' C A 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 11 C2' C A 522 27.199 132.712 111.104 1.00 57.86 C
ATOM 12 O2' C A 522 27.741 132.889 109.813 1.00 59.36 O
ATOM 13 C1' C A 522 27.035 134.103 111.731 1.00 57.62 C
ATOM 14 N1 C A 522 27.496 134.315 113.115 1.00 57.25 N
ATOM 15 C2 C A 522 28.534 135.223 113.335 1.00 55.91 C
ATOM 16 O2 C A 522 29.056 135.780 112.366 1.00 55.16 O
ATOM 17 N3 C A 522 28.946 135.468 114.594 1.00 57.50 N
ATOM 18 C4 C A 522 28.372 134.839 115.618 1.00 58.93 C
ATOM 19 N4 C A 522 28.819 135.120 116.846 1.00 59.75 N
ATOM 20 C5 C A 522 27.317 133.893 115.428 1.00 58.09 C
ATOM 21 C6 C A 522 26.916 133.662 114.170 1.00 57.27 C
ATOM 22 P G A 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 23 OP1 G A 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 24 OP2 G A 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 25 O5' G A 523 26.877 129.411 109.249 1.00 56.85 O
TER
ATOM 1 O3' A B2029 32.428 137.928 116.283 1.00 47.16 O
ATOM 2 P C B2030 31.139 138.624 116.943 1.00 48.67 P
ATOM 3 OP1 C B2030 31.614 139.744 117.802 1.00 47.01 O
ATOM 4 OP2 C B2030 30.272 137.555 117.534 1.00 46.21 O
ATOM 5 O5' C B2030 30.384 139.259 115.697 1.00 47.04 O
ATOM 6 C5' C B2030 29.528 138.449 114.875 1.00 47.49 C
ATOM 7 C4' C B2030 28.833 139.299 113.843 1.00 46.47 C
ATOM 8 O4' C B2030 28.034 140.323 114.496 1.00 46.22 O
ATOM 9 C3' C B2030 29.750 140.083 112.933 1.00 45.51 C
ATOM 10 O3' C B2030 30.233 139.263 111.881 1.00 45.96 O
ATOM 11 C2' C B2030 28.832 141.189 112.439 1.00 44.93 C
ATOM 12 O2' C B2030 27.956 140.716 111.439 1.00 45.81 O
ATOM 13 C1' C B2030 28.025 141.496 113.703 1.00 44.06 C
ATOM 14 N1 C B2030 28.559 142.614 114.505 1.00 42.46 N
ATOM 15 C2 C B2030 28.370 143.917 114.048 1.00 40.25 C
ATOM 16 O2 C B2030 27.761 144.098 113.003 1.00 40.24 O
ATOM 17 N3 C B2030 28.853 144.944 114.760 1.00 41.32 N
ATOM 18 C4 C B2030 29.497 144.719 115.904 1.00 43.54 C
ATOM 19 N4 C B2030 29.945 145.779 116.586 1.00 44.95 N
ATOM 20 C5 C B2030 29.708 143.402 116.402 1.00 42.82 C
ATOM 21 C6 C B2030 29.227 142.387 115.675 1.00 42.84 C
ATOM 22 P A B2031 31.553 139.698 111.077 1.00 47.65 P
ATOM 23 OP1 A B2031 31.998 138.519 110.302 1.00 49.13 O
ATOM 24 OP2 A B2031 32.493 140.344 112.031 1.00 48.10 O
ATOM 25 O5' A B2031 31.036 140.810 110.057 1.00 47.89 O
TER
Atoms:
C2: (28.534,135.223,113.335)
OP1: (21.218,136.425,111.390)
OP2: (20.871,134.009,112.220)
C4: (28.372,134.839,115.618)
O5': (22.971,134.755,111.085)
C3': (25.753,132.221,111.053)
C1': (27.035,134.103,111.731)
O4': (25.673,134.463,111.646)
C5': (23.547,133.455,111.209)
P: (21.760,135.192,112.010)
O2: (29.056,135.780,112.366)
C4': (24.990,133.504,110.815)
C2': (27.199,132.712,111.104)
O2': (27.741,132.889,109.813)
N1: (27.496,134.315,113.115)
N3: (28.946,135.468,114.594)
N4: (28.819,135.120,116.846)
C6: (26.916,133.662,114.170)
C5: (27.317,133.893,115.428)
O3': (25.511,131.379,109.935)
OP1: (21.218,136.425,111.390)
OP2: (20.871,134.009,112.220)
C4: (28.372,134.839,115.618)
O5': (22.971,134.755,111.085)
C3': (25.753,132.221,111.053)
C1': (27.035,134.103,111.731)
O4': (25.673,134.463,111.646)
C5': (23.547,133.455,111.209)
P: (21.760,135.192,112.010)
O2: (29.056,135.780,112.366)
C4': (24.990,133.504,110.815)
C2': (27.199,132.712,111.104)
O2': (27.741,132.889,109.813)
N1: (27.496,134.315,113.115)
N3: (28.946,135.468,114.594)
N4: (28.819,135.120,116.846)
C6: (26.916,133.662,114.170)
C5: (27.317,133.893,115.428)
O3': (25.511,131.379,109.935)
C2: (28.370,143.917,114.048)
OP1: (31.614,139.744,117.802)
OP2: (30.272,137.555,117.534)
C4: (29.497,144.719,115.904)
O5': (30.384,139.259,115.697)
C3': (29.750,140.083,112.933)
C1': (28.025,141.496,113.703)
O4': (28.034,140.323,114.496)
C5': (29.528,138.449,114.875)
P: (31.139,138.624,116.943)
O2: (27.761,144.098,113.003)
C4': (28.833,139.299,113.843)
C2': (28.832,141.189,112.439)
O2': (27.956,140.716,111.439)
N1: (28.559,142.614,114.505)
N3: (28.853,144.944,114.760)
N4: (29.945,145.779,116.586)
C6: (29.227,142.387,115.675)
C5: (29.708,143.402,116.402)
O3': (30.233,139.263,111.881)
OP1: (31.614,139.744,117.802)
OP2: (30.272,137.555,117.534)
C4: (29.497,144.719,115.904)
O5': (30.384,139.259,115.697)
C3': (29.750,140.083,112.933)
C1': (28.025,141.496,113.703)
O4': (28.034,140.323,114.496)
C5': (29.528,138.449,114.875)
P: (31.139,138.624,116.943)
O2: (27.761,144.098,113.003)
C4': (28.833,139.299,113.843)
C2': (28.832,141.189,112.439)
O2': (27.956,140.716,111.439)
N1: (28.559,142.614,114.505)
N3: (28.853,144.944,114.760)
N4: (29.945,145.779,116.586)
C6: (29.227,142.387,115.675)
C5: (29.708,143.402,116.402)
O3': (30.233,139.263,111.881)
Image (generated by PyMOL):