Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0522:02030
Extra
PDB:
ATOM 1 O3' U A 521 22.385 135.515 113.069 1.00 41.32 O
ATOM 2 P C A 522 21.679 135.038 111.716 1.00 44.15 P
ATOM 3 OP1 C A 522 21.108 136.246 111.067 1.00 46.25 O
ATOM 4 OP2 C A 522 20.811 133.856 111.975 1.00 42.56 O
ATOM 5 O5' C A 522 22.900 134.577 110.816 1.00 44.53 O
ATOM 6 C5' C A 522 23.483 133.284 110.976 1.00 46.58 C
ATOM 7 C4' C A 522 24.906 133.316 110.511 1.00 47.48 C
ATOM 8 O4' C A 522 25.625 134.291 111.295 1.00 48.82 O
ATOM 9 C3' C A 522 25.673 132.029 110.715 1.00 48.89 C
ATOM 10 O3' C A 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 11 C2' C A 522 27.123 132.513 110.757 1.00 50.44 C
ATOM 12 O2' C A 522 27.667 132.692 109.468 1.00 53.14 O
ATOM 13 C1' C A 522 26.975 133.897 111.402 1.00 49.76 C
ATOM 14 N1 C A 522 27.411 134.097 112.797 1.00 49.65 N
ATOM 15 C2 C A 522 28.479 134.968 113.044 1.00 50.56 C
ATOM 16 O2 C A 522 29.067 135.483 112.084 1.00 50.15 O
ATOM 17 N3 C A 522 28.847 135.222 114.322 1.00 52.45 N
ATOM 18 C4 C A 522 28.202 134.633 115.333 1.00 52.79 C
ATOM 19 N4 C A 522 28.588 134.933 116.580 1.00 52.92 N
ATOM 20 C5 C A 522 27.131 133.714 115.111 1.00 51.39 C
ATOM 21 C6 C A 522 26.774 133.476 113.838 1.00 50.72 C
ATOM 22 P G A 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 23 OP1 G A 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 24 OP2 G A 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 25 O5' G A 523 26.978 129.351 108.919 1.00 46.58 O
TER
ATOM 1 O3' A B2029 32.297 137.627 115.946 1.00 43.73 O
ATOM 2 P C B2030 31.049 138.378 116.614 1.00 45.07 P
ATOM 3 OP1 C B2030 31.576 139.501 117.430 1.00 45.67 O
ATOM 4 OP2 C B2030 30.194 137.343 117.256 1.00 45.41 O
ATOM 5 O5' C B2030 30.270 139.010 115.377 1.00 43.56 O
ATOM 6 C5' C B2030 29.365 138.219 114.584 1.00 42.60 C
ATOM 7 C4' C B2030 28.661 139.085 113.563 1.00 42.36 C
ATOM 8 O4' C B2030 27.867 140.102 114.230 1.00 42.61 O
ATOM 9 C3' C B2030 29.561 139.884 112.644 1.00 41.45 C
ATOM 10 O3' C B2030 30.016 139.094 111.565 1.00 41.89 O
ATOM 11 C2' C B2030 28.634 140.989 112.171 1.00 40.42 C
ATOM 12 O2' C B2030 27.736 140.518 111.198 1.00 42.05 O
ATOM 13 C1' C B2030 27.849 141.284 113.445 1.00 40.31 C
ATOM 14 N1 C B2030 28.427 142.384 114.229 1.00 39.58 N
ATOM 15 C2 C B2030 28.252 143.689 113.780 1.00 39.89 C
ATOM 16 O2 C B2030 27.611 143.884 112.751 1.00 42.61 O
ATOM 17 N3 C B2030 28.780 144.707 114.481 1.00 40.01 N
ATOM 18 C4 C B2030 29.456 144.462 115.602 1.00 41.59 C
ATOM 19 N4 C B2030 29.952 145.505 116.276 1.00 42.39 N
ATOM 20 C5 C B2030 29.651 143.139 116.089 1.00 42.23 C
ATOM 21 C6 C B2030 29.125 142.139 115.376 1.00 41.02 C
ATOM 22 P A B2031 31.361 139.507 110.795 1.00 43.91 P
ATOM 23 OP1 A B2031 31.841 138.287 110.111 1.00 43.51 O
ATOM 24 OP2 A B2031 32.255 140.218 111.747 1.00 42.76 O
ATOM 25 O5' A B2031 30.891 140.569 109.705 1.00 43.75 O
TER
ATOM 2 P C A 522 21.679 135.038 111.716 1.00 44.15 P
ATOM 3 OP1 C A 522 21.108 136.246 111.067 1.00 46.25 O
ATOM 4 OP2 C A 522 20.811 133.856 111.975 1.00 42.56 O
ATOM 5 O5' C A 522 22.900 134.577 110.816 1.00 44.53 O
ATOM 6 C5' C A 522 23.483 133.284 110.976 1.00 46.58 C
ATOM 7 C4' C A 522 24.906 133.316 110.511 1.00 47.48 C
ATOM 8 O4' C A 522 25.625 134.291 111.295 1.00 48.82 O
ATOM 9 C3' C A 522 25.673 132.029 110.715 1.00 48.89 C
ATOM 10 O3' C A 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 11 C2' C A 522 27.123 132.513 110.757 1.00 50.44 C
ATOM 12 O2' C A 522 27.667 132.692 109.468 1.00 53.14 O
ATOM 13 C1' C A 522 26.975 133.897 111.402 1.00 49.76 C
ATOM 14 N1 C A 522 27.411 134.097 112.797 1.00 49.65 N
ATOM 15 C2 C A 522 28.479 134.968 113.044 1.00 50.56 C
ATOM 16 O2 C A 522 29.067 135.483 112.084 1.00 50.15 O
ATOM 17 N3 C A 522 28.847 135.222 114.322 1.00 52.45 N
ATOM 18 C4 C A 522 28.202 134.633 115.333 1.00 52.79 C
ATOM 19 N4 C A 522 28.588 134.933 116.580 1.00 52.92 N
ATOM 20 C5 C A 522 27.131 133.714 115.111 1.00 51.39 C
ATOM 21 C6 C A 522 26.774 133.476 113.838 1.00 50.72 C
ATOM 22 P G A 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 23 OP1 G A 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 24 OP2 G A 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 25 O5' G A 523 26.978 129.351 108.919 1.00 46.58 O
TER
ATOM 1 O3' A B2029 32.297 137.627 115.946 1.00 43.73 O
ATOM 2 P C B2030 31.049 138.378 116.614 1.00 45.07 P
ATOM 3 OP1 C B2030 31.576 139.501 117.430 1.00 45.67 O
ATOM 4 OP2 C B2030 30.194 137.343 117.256 1.00 45.41 O
ATOM 5 O5' C B2030 30.270 139.010 115.377 1.00 43.56 O
ATOM 6 C5' C B2030 29.365 138.219 114.584 1.00 42.60 C
ATOM 7 C4' C B2030 28.661 139.085 113.563 1.00 42.36 C
ATOM 8 O4' C B2030 27.867 140.102 114.230 1.00 42.61 O
ATOM 9 C3' C B2030 29.561 139.884 112.644 1.00 41.45 C
ATOM 10 O3' C B2030 30.016 139.094 111.565 1.00 41.89 O
ATOM 11 C2' C B2030 28.634 140.989 112.171 1.00 40.42 C
ATOM 12 O2' C B2030 27.736 140.518 111.198 1.00 42.05 O
ATOM 13 C1' C B2030 27.849 141.284 113.445 1.00 40.31 C
ATOM 14 N1 C B2030 28.427 142.384 114.229 1.00 39.58 N
ATOM 15 C2 C B2030 28.252 143.689 113.780 1.00 39.89 C
ATOM 16 O2 C B2030 27.611 143.884 112.751 1.00 42.61 O
ATOM 17 N3 C B2030 28.780 144.707 114.481 1.00 40.01 N
ATOM 18 C4 C B2030 29.456 144.462 115.602 1.00 41.59 C
ATOM 19 N4 C B2030 29.952 145.505 116.276 1.00 42.39 N
ATOM 20 C5 C B2030 29.651 143.139 116.089 1.00 42.23 C
ATOM 21 C6 C B2030 29.125 142.139 115.376 1.00 41.02 C
ATOM 22 P A B2031 31.361 139.507 110.795 1.00 43.91 P
ATOM 23 OP1 A B2031 31.841 138.287 110.111 1.00 43.51 O
ATOM 24 OP2 A B2031 32.255 140.218 111.747 1.00 42.76 O
ATOM 25 O5' A B2031 30.891 140.569 109.705 1.00 43.75 O
TER
Atoms:
C2: (28.479,134.968,113.044)
OP1: (21.108,136.246,111.067)
OP2: (20.811,133.856,111.975)
C4: (28.202,134.633,115.333)
O5': (22.900,134.577,110.816)
C3': (25.673,132.029,110.715)
C1': (26.975,133.897,111.402)
O4': (25.625,134.291,111.295)
C5': (23.483,133.284,110.976)
P: (21.679,135.038,111.716)
O2: (29.067,135.483,112.084)
C4': (24.906,133.316,110.511)
C2': (27.123,132.513,110.757)
O2': (27.667,132.692,109.468)
N1: (27.411,134.097,112.797)
N3: (28.847,135.222,114.322)
N4: (28.588,134.933,116.580)
C6: (26.774,133.476,113.838)
C5: (27.131,133.714,115.111)
O3': (25.401,131.170,109.607)
OP1: (21.108,136.246,111.067)
OP2: (20.811,133.856,111.975)
C4: (28.202,134.633,115.333)
O5': (22.900,134.577,110.816)
C3': (25.673,132.029,110.715)
C1': (26.975,133.897,111.402)
O4': (25.625,134.291,111.295)
C5': (23.483,133.284,110.976)
P: (21.679,135.038,111.716)
O2: (29.067,135.483,112.084)
C4': (24.906,133.316,110.511)
C2': (27.123,132.513,110.757)
O2': (27.667,132.692,109.468)
N1: (27.411,134.097,112.797)
N3: (28.847,135.222,114.322)
N4: (28.588,134.933,116.580)
C6: (26.774,133.476,113.838)
C5: (27.131,133.714,115.111)
O3': (25.401,131.170,109.607)
C2: (28.252,143.689,113.780)
OP1: (31.576,139.501,117.430)
OP2: (30.194,137.343,117.256)
C4: (29.456,144.462,115.602)
O5': (30.270,139.010,115.377)
C3': (29.561,139.884,112.644)
C1': (27.849,141.284,113.445)
O4': (27.867,140.102,114.230)
C5': (29.365,138.219,114.584)
P: (31.049,138.378,116.614)
O2: (27.611,143.884,112.751)
C4': (28.661,139.085,113.563)
C2': (28.634,140.989,112.171)
O2': (27.736,140.518,111.198)
N1: (28.427,142.384,114.229)
N3: (28.780,144.707,114.481)
N4: (29.952,145.505,116.276)
C6: (29.125,142.139,115.376)
C5: (29.651,143.139,116.089)
O3': (30.016,139.094,111.565)
OP1: (31.576,139.501,117.430)
OP2: (30.194,137.343,117.256)
C4: (29.456,144.462,115.602)
O5': (30.270,139.010,115.377)
C3': (29.561,139.884,112.644)
C1': (27.849,141.284,113.445)
O4': (27.867,140.102,114.230)
C5': (29.365,138.219,114.584)
P: (31.049,138.378,116.614)
O2: (27.611,143.884,112.751)
C4': (28.661,139.085,113.563)
C2': (28.634,140.989,112.171)
O2': (27.736,140.518,111.198)
N1: (28.427,142.384,114.229)
N3: (28.780,144.707,114.481)
N4: (29.952,145.505,116.276)
C6: (29.125,142.139,115.376)
C5: (29.651,143.139,116.089)
O3': (30.016,139.094,111.565)
Image (generated by PyMOL):