Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0114:0113
Extra
PDB:
ATOM 1 O3' U A 113 82.122 164.911 39.213 1.00 51.51 O
ATOM 2 P C A 114 82.662 165.726 37.924 1.00 54.28 P
ATOM 3 OP1 C A 114 83.262 166.972 38.477 1.00 56.80 O
ATOM 4 OP2 C A 114 81.588 165.818 36.895 1.00 49.21 O
ATOM 5 O5' C A 114 83.869 164.849 37.366 1.00 51.76 O
ATOM 6 C5' C A 114 85.092 164.731 38.120 1.00 52.67 C
ATOM 7 C4' C A 114 86.055 163.795 37.424 1.00 55.62 C
ATOM 8 O4' C A 114 85.474 162.463 37.339 1.00 52.50 O
ATOM 9 C3' C A 114 86.393 164.133 35.979 1.00 57.84 C
ATOM 10 O3' C A 114 87.395 165.141 35.880 1.00 63.05 O
ATOM 11 C2' C A 114 86.875 162.791 35.451 1.00 55.45 C
ATOM 12 O2' C A 114 88.180 162.476 35.902 1.00 57.47 O
ATOM 13 C1' C A 114 85.890 161.841 36.132 1.00 50.88 C
ATOM 14 N1 C A 114 84.700 161.538 35.307 1.00 45.66 N
ATOM 15 C2 C A 114 84.784 160.502 34.361 1.00 43.46 C
ATOM 16 O2 C A 114 85.864 159.904 34.215 1.00 42.52 O
ATOM 17 N3 C A 114 83.689 160.182 33.632 1.00 40.93 N
ATOM 18 C4 C A 114 82.547 160.848 33.815 1.00 40.20 C
ATOM 19 N4 C A 114 81.486 160.468 33.102 1.00 38.22 N
ATOM 20 C5 C A 114 82.441 161.925 34.744 1.00 39.58 C
ATOM 21 C6 C A 114 83.530 162.235 35.460 1.00 43.08 C
ATOM 22 P U A 115 87.373 166.168 34.641 1.00 67.97 P
ATOM 23 OP1 U A 115 88.377 167.206 34.995 1.00 67.09 O
ATOM 24 OP2 U A 115 85.970 166.575 34.327 1.00 65.74 O
ATOM 25 O5' U A 115 87.912 165.303 33.411 1.00 68.92 O
TER
ATOM 1 O3' C B 112 76.388 163.222 41.420 1.00 42.87 O
ATOM 2 P U B 113 76.778 164.195 40.198 1.00 45.58 P
ATOM 3 OP1 U B 113 76.728 165.565 40.765 1.00 42.92 O
ATOM 4 OP2 U B 113 75.929 163.857 39.020 1.00 46.44 O
ATOM 5 O5' U B 113 78.278 163.791 39.822 1.00 41.98 O
ATOM 6 C5' U B 113 79.354 164.053 40.728 1.00 42.14 C
ATOM 7 C4' U B 113 80.613 163.321 40.314 1.00 43.33 C
ATOM 8 O4' U B 113 80.297 161.942 40.016 1.00 42.01 O
ATOM 9 C3' U B 113 81.352 163.719 39.041 1.00 45.15 C
ATOM 10 O3' U B 113 82.122 164.911 39.213 1.00 51.51 O
ATOM 11 C2' U B 113 82.295 162.529 38.886 1.00 42.28 C
ATOM 12 O2' U B 113 83.375 162.594 39.797 1.00 41.20 O
ATOM 13 C1' U B 113 81.398 161.370 39.328 1.00 39.79 C
ATOM 14 N1 U B 113 80.910 160.555 38.207 1.00 35.04 N
ATOM 15 C2 U B 113 81.819 159.698 37.607 1.00 32.71 C
ATOM 16 O2 U B 113 82.975 159.584 37.985 1.00 29.86 O
ATOM 17 N3 U B 113 81.322 158.974 36.555 1.00 31.49 N
ATOM 18 C4 U B 113 80.033 159.004 36.057 1.00 35.19 C
ATOM 19 O4 U B 113 79.728 158.249 35.128 1.00 37.84 O
ATOM 20 C5 U B 113 79.147 159.911 36.734 1.00 33.60 C
ATOM 21 C6 U B 113 79.604 160.636 37.758 1.00 35.09 C
ATOM 22 P C B 114 82.662 165.726 37.924 1.00 54.28 P
ATOM 23 OP1 C B 114 83.262 166.972 38.477 1.00 56.80 O
ATOM 24 OP2 C B 114 81.588 165.818 36.895 1.00 49.21 O
ATOM 25 O5' C B 114 83.869 164.849 37.366 1.00 51.76 O
TER
ATOM 2 P C A 114 82.662 165.726 37.924 1.00 54.28 P
ATOM 3 OP1 C A 114 83.262 166.972 38.477 1.00 56.80 O
ATOM 4 OP2 C A 114 81.588 165.818 36.895 1.00 49.21 O
ATOM 5 O5' C A 114 83.869 164.849 37.366 1.00 51.76 O
ATOM 6 C5' C A 114 85.092 164.731 38.120 1.00 52.67 C
ATOM 7 C4' C A 114 86.055 163.795 37.424 1.00 55.62 C
ATOM 8 O4' C A 114 85.474 162.463 37.339 1.00 52.50 O
ATOM 9 C3' C A 114 86.393 164.133 35.979 1.00 57.84 C
ATOM 10 O3' C A 114 87.395 165.141 35.880 1.00 63.05 O
ATOM 11 C2' C A 114 86.875 162.791 35.451 1.00 55.45 C
ATOM 12 O2' C A 114 88.180 162.476 35.902 1.00 57.47 O
ATOM 13 C1' C A 114 85.890 161.841 36.132 1.00 50.88 C
ATOM 14 N1 C A 114 84.700 161.538 35.307 1.00 45.66 N
ATOM 15 C2 C A 114 84.784 160.502 34.361 1.00 43.46 C
ATOM 16 O2 C A 114 85.864 159.904 34.215 1.00 42.52 O
ATOM 17 N3 C A 114 83.689 160.182 33.632 1.00 40.93 N
ATOM 18 C4 C A 114 82.547 160.848 33.815 1.00 40.20 C
ATOM 19 N4 C A 114 81.486 160.468 33.102 1.00 38.22 N
ATOM 20 C5 C A 114 82.441 161.925 34.744 1.00 39.58 C
ATOM 21 C6 C A 114 83.530 162.235 35.460 1.00 43.08 C
ATOM 22 P U A 115 87.373 166.168 34.641 1.00 67.97 P
ATOM 23 OP1 U A 115 88.377 167.206 34.995 1.00 67.09 O
ATOM 24 OP2 U A 115 85.970 166.575 34.327 1.00 65.74 O
ATOM 25 O5' U A 115 87.912 165.303 33.411 1.00 68.92 O
TER
ATOM 1 O3' C B 112 76.388 163.222 41.420 1.00 42.87 O
ATOM 2 P U B 113 76.778 164.195 40.198 1.00 45.58 P
ATOM 3 OP1 U B 113 76.728 165.565 40.765 1.00 42.92 O
ATOM 4 OP2 U B 113 75.929 163.857 39.020 1.00 46.44 O
ATOM 5 O5' U B 113 78.278 163.791 39.822 1.00 41.98 O
ATOM 6 C5' U B 113 79.354 164.053 40.728 1.00 42.14 C
ATOM 7 C4' U B 113 80.613 163.321 40.314 1.00 43.33 C
ATOM 8 O4' U B 113 80.297 161.942 40.016 1.00 42.01 O
ATOM 9 C3' U B 113 81.352 163.719 39.041 1.00 45.15 C
ATOM 10 O3' U B 113 82.122 164.911 39.213 1.00 51.51 O
ATOM 11 C2' U B 113 82.295 162.529 38.886 1.00 42.28 C
ATOM 12 O2' U B 113 83.375 162.594 39.797 1.00 41.20 O
ATOM 13 C1' U B 113 81.398 161.370 39.328 1.00 39.79 C
ATOM 14 N1 U B 113 80.910 160.555 38.207 1.00 35.04 N
ATOM 15 C2 U B 113 81.819 159.698 37.607 1.00 32.71 C
ATOM 16 O2 U B 113 82.975 159.584 37.985 1.00 29.86 O
ATOM 17 N3 U B 113 81.322 158.974 36.555 1.00 31.49 N
ATOM 18 C4 U B 113 80.033 159.004 36.057 1.00 35.19 C
ATOM 19 O4 U B 113 79.728 158.249 35.128 1.00 37.84 O
ATOM 20 C5 U B 113 79.147 159.911 36.734 1.00 33.60 C
ATOM 21 C6 U B 113 79.604 160.636 37.758 1.00 35.09 C
ATOM 22 P C B 114 82.662 165.726 37.924 1.00 54.28 P
ATOM 23 OP1 C B 114 83.262 166.972 38.477 1.00 56.80 O
ATOM 24 OP2 C B 114 81.588 165.818 36.895 1.00 49.21 O
ATOM 25 O5' C B 114 83.869 164.849 37.366 1.00 51.76 O
TER
Atoms:
C2: (84.784,160.502,34.361)
OP1: (83.262,166.972,38.477)
OP2: (81.588,165.818,36.895)
C4: (82.547,160.848,33.815)
O5': (83.869,164.849,37.366)
C3': (86.393,164.133,35.979)
C1': (85.890,161.841,36.132)
O4': (85.474,162.463,37.339)
C5': (85.092,164.731,38.120)
P: (82.662,165.726,37.924)
O2: (85.864,159.904,34.215)
C4': (86.055,163.795,37.424)
C2': (86.875,162.791,35.451)
O2': (88.180,162.476,35.902)
N1: (84.700,161.538,35.307)
N3: (83.689,160.182,33.632)
N4: (81.486,160.468,33.102)
C6: (83.530,162.235,35.460)
C5: (82.441,161.925,34.744)
O3': (87.395,165.141,35.880)
OP1: (83.262,166.972,38.477)
OP2: (81.588,165.818,36.895)
C4: (82.547,160.848,33.815)
O5': (83.869,164.849,37.366)
C3': (86.393,164.133,35.979)
C1': (85.890,161.841,36.132)
O4': (85.474,162.463,37.339)
C5': (85.092,164.731,38.120)
P: (82.662,165.726,37.924)
O2: (85.864,159.904,34.215)
C4': (86.055,163.795,37.424)
C2': (86.875,162.791,35.451)
O2': (88.180,162.476,35.902)
N1: (84.700,161.538,35.307)
N3: (83.689,160.182,33.632)
N4: (81.486,160.468,33.102)
C6: (83.530,162.235,35.460)
C5: (82.441,161.925,34.744)
O3': (87.395,165.141,35.880)
C4: (80.033,159.004,36.057)
N3: (81.322,158.974,36.555)
OP1: (76.728,165.565,40.765)
OP2: (75.929,163.857,39.020)
C2: (81.819,159.698,37.607)
C1': (81.398,161.370,39.328)
C3': (81.352,163.719,39.041)
O5': (78.278,163.791,39.822)
O4': (80.297,161.942,40.016)
C5': (79.354,164.053,40.728)
P: (76.778,164.195,40.198)
C4': (80.613,163.321,40.314)
C2': (82.295,162.529,38.886)
O2': (83.375,162.594,39.797)
N1: (80.910,160.555,38.207)
O4: (79.728,158.249,35.128)
O2: (82.975,159.584,37.985)
C6: (79.604,160.636,37.758)
C5: (79.147,159.911,36.734)
O3': (82.122,164.911,39.213)
N3: (81.322,158.974,36.555)
OP1: (76.728,165.565,40.765)
OP2: (75.929,163.857,39.020)
C2: (81.819,159.698,37.607)
C1': (81.398,161.370,39.328)
C3': (81.352,163.719,39.041)
O5': (78.278,163.791,39.822)
O4': (80.297,161.942,40.016)
C5': (79.354,164.053,40.728)
P: (76.778,164.195,40.198)
C4': (80.613,163.321,40.314)
C2': (82.295,162.529,38.886)
O2': (83.375,162.594,39.797)
N1: (80.910,160.555,38.207)
O4: (79.728,158.249,35.128)
O2: (82.975,159.584,37.985)
C6: (79.604,160.636,37.758)
C5: (79.147,159.911,36.734)
O3': (82.122,164.911,39.213)
Image (generated by PyMOL):