Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0573:0572
Extra
PDB:
ATOM 1 O3' U A 572 -5.185 80.809 118.427 1.00 73.23 O
ATOM 2 P C A 573 -5.719 81.622 117.147 1.00 73.98 P
ATOM 3 OP1 C A 573 -6.066 80.613 116.109 1.00 72.31 O
ATOM 4 OP2 C A 573 -4.732 82.687 116.837 1.00 75.92 O
ATOM 5 O5' C A 573 -7.055 82.334 117.655 1.00 71.30 O
ATOM 6 C5' C A 573 -8.214 81.555 118.010 1.00 68.17 C
ATOM 7 C4' C A 573 -9.318 82.447 118.529 1.00 66.47 C
ATOM 8 O4' C A 573 -8.890 83.103 119.745 1.00 64.13 O
ATOM 9 C3' C A 573 -9.722 83.601 117.631 1.00 66.92 C
ATOM 10 O3' C A 573 -10.592 83.162 116.594 1.00 68.16 O
ATOM 11 C2' C A 573 -10.409 84.553 118.607 1.00 67.15 C
ATOM 12 O2' C A 573 -11.766 84.250 118.871 1.00 69.85 O
ATOM 13 C1' C A 573 -9.589 84.329 119.881 1.00 65.91 C
ATOM 14 N1 C A 573 -8.629 85.407 120.162 1.00 67.22 N
ATOM 15 C2 C A 573 -9.062 86.507 120.916 1.00 67.65 C
ATOM 16 O2 C A 573 -10.232 86.531 121.327 1.00 66.12 O
ATOM 17 N3 C A 573 -8.193 87.514 121.176 1.00 68.07 N
ATOM 18 C4 C A 573 -6.940 87.449 120.720 1.00 67.98 C
ATOM 19 N4 C A 573 -6.117 88.462 121.007 1.00 67.77 N
ATOM 20 C5 C A 573 -6.473 86.340 119.951 1.00 67.22 C
ATOM 21 C6 C A 573 -7.341 85.352 119.698 1.00 67.15 C
ATOM 22 P C A 574 -10.566 83.899 115.166 1.00 70.37 P
ATOM 23 OP1 C A 574 -11.534 83.209 114.274 1.00 69.05 O
ATOM 24 OP2 C A 574 -9.144 84.008 114.747 1.00 71.45 O
ATOM 25 O5' C A 574 -11.118 85.362 115.486 1.00 67.75 O
TER
ATOM 1 O3' G B 571 0.369 82.391 120.206 1.00 73.81 O
ATOM 2 P U B 572 -0.675 82.729 119.031 1.00 73.98 P
ATOM 3 OP1 U B 572 -0.361 81.863 117.869 1.00 72.41 O
ATOM 4 OP2 U B 572 -0.753 84.208 118.848 1.00 73.17 O
ATOM 5 O5' U B 572 -2.074 82.267 119.632 1.00 74.38 O
ATOM 6 C5' U B 572 -2.359 80.880 119.883 1.00 73.23 C
ATOM 7 C4' U B 572 -3.766 80.739 120.398 1.00 72.47 C
ATOM 8 O4' U B 572 -3.861 81.307 121.732 1.00 71.13 O
ATOM 9 C3' U B 572 -4.794 81.517 119.597 1.00 72.49 C
ATOM 10 O3' U B 572 -5.185 80.809 118.427 1.00 73.23 O
ATOM 11 C2' U B 572 -5.917 81.703 120.609 1.00 72.06 C
ATOM 12 O2' U B 572 -6.706 80.541 120.777 1.00 74.62 O
ATOM 13 C1' U B 572 -5.122 81.939 121.893 1.00 70.90 C
ATOM 14 N1 U B 572 -4.905 83.363 122.201 1.00 70.00 N
ATOM 15 C2 U B 572 -5.917 84.043 122.867 1.00 70.23 C
ATOM 16 O2 U B 572 -6.970 83.520 123.193 1.00 70.35 O
ATOM 17 N3 U B 572 -5.644 85.360 123.143 1.00 69.75 N
ATOM 18 C4 U B 572 -4.492 86.053 122.837 1.00 69.08 C
ATOM 19 O4 U B 572 -4.389 87.236 123.173 1.00 68.49 O
ATOM 20 C5 U B 572 -3.504 85.290 122.138 1.00 69.09 C
ATOM 21 C6 U B 572 -3.739 84.007 121.848 1.00 69.52 C
ATOM 22 P C B 573 -5.719 81.622 117.147 1.00 73.98 P
ATOM 23 OP1 C B 573 -6.066 80.613 116.109 1.00 72.31 O
ATOM 24 OP2 C B 573 -4.732 82.687 116.837 1.00 75.92 O
ATOM 25 O5' C B 573 -7.055 82.334 117.655 1.00 71.30 O
TER
ATOM 2 P C A 573 -5.719 81.622 117.147 1.00 73.98 P
ATOM 3 OP1 C A 573 -6.066 80.613 116.109 1.00 72.31 O
ATOM 4 OP2 C A 573 -4.732 82.687 116.837 1.00 75.92 O
ATOM 5 O5' C A 573 -7.055 82.334 117.655 1.00 71.30 O
ATOM 6 C5' C A 573 -8.214 81.555 118.010 1.00 68.17 C
ATOM 7 C4' C A 573 -9.318 82.447 118.529 1.00 66.47 C
ATOM 8 O4' C A 573 -8.890 83.103 119.745 1.00 64.13 O
ATOM 9 C3' C A 573 -9.722 83.601 117.631 1.00 66.92 C
ATOM 10 O3' C A 573 -10.592 83.162 116.594 1.00 68.16 O
ATOM 11 C2' C A 573 -10.409 84.553 118.607 1.00 67.15 C
ATOM 12 O2' C A 573 -11.766 84.250 118.871 1.00 69.85 O
ATOM 13 C1' C A 573 -9.589 84.329 119.881 1.00 65.91 C
ATOM 14 N1 C A 573 -8.629 85.407 120.162 1.00 67.22 N
ATOM 15 C2 C A 573 -9.062 86.507 120.916 1.00 67.65 C
ATOM 16 O2 C A 573 -10.232 86.531 121.327 1.00 66.12 O
ATOM 17 N3 C A 573 -8.193 87.514 121.176 1.00 68.07 N
ATOM 18 C4 C A 573 -6.940 87.449 120.720 1.00 67.98 C
ATOM 19 N4 C A 573 -6.117 88.462 121.007 1.00 67.77 N
ATOM 20 C5 C A 573 -6.473 86.340 119.951 1.00 67.22 C
ATOM 21 C6 C A 573 -7.341 85.352 119.698 1.00 67.15 C
ATOM 22 P C A 574 -10.566 83.899 115.166 1.00 70.37 P
ATOM 23 OP1 C A 574 -11.534 83.209 114.274 1.00 69.05 O
ATOM 24 OP2 C A 574 -9.144 84.008 114.747 1.00 71.45 O
ATOM 25 O5' C A 574 -11.118 85.362 115.486 1.00 67.75 O
TER
ATOM 1 O3' G B 571 0.369 82.391 120.206 1.00 73.81 O
ATOM 2 P U B 572 -0.675 82.729 119.031 1.00 73.98 P
ATOM 3 OP1 U B 572 -0.361 81.863 117.869 1.00 72.41 O
ATOM 4 OP2 U B 572 -0.753 84.208 118.848 1.00 73.17 O
ATOM 5 O5' U B 572 -2.074 82.267 119.632 1.00 74.38 O
ATOM 6 C5' U B 572 -2.359 80.880 119.883 1.00 73.23 C
ATOM 7 C4' U B 572 -3.766 80.739 120.398 1.00 72.47 C
ATOM 8 O4' U B 572 -3.861 81.307 121.732 1.00 71.13 O
ATOM 9 C3' U B 572 -4.794 81.517 119.597 1.00 72.49 C
ATOM 10 O3' U B 572 -5.185 80.809 118.427 1.00 73.23 O
ATOM 11 C2' U B 572 -5.917 81.703 120.609 1.00 72.06 C
ATOM 12 O2' U B 572 -6.706 80.541 120.777 1.00 74.62 O
ATOM 13 C1' U B 572 -5.122 81.939 121.893 1.00 70.90 C
ATOM 14 N1 U B 572 -4.905 83.363 122.201 1.00 70.00 N
ATOM 15 C2 U B 572 -5.917 84.043 122.867 1.00 70.23 C
ATOM 16 O2 U B 572 -6.970 83.520 123.193 1.00 70.35 O
ATOM 17 N3 U B 572 -5.644 85.360 123.143 1.00 69.75 N
ATOM 18 C4 U B 572 -4.492 86.053 122.837 1.00 69.08 C
ATOM 19 O4 U B 572 -4.389 87.236 123.173 1.00 68.49 O
ATOM 20 C5 U B 572 -3.504 85.290 122.138 1.00 69.09 C
ATOM 21 C6 U B 572 -3.739 84.007 121.848 1.00 69.52 C
ATOM 22 P C B 573 -5.719 81.622 117.147 1.00 73.98 P
ATOM 23 OP1 C B 573 -6.066 80.613 116.109 1.00 72.31 O
ATOM 24 OP2 C B 573 -4.732 82.687 116.837 1.00 75.92 O
ATOM 25 O5' C B 573 -7.055 82.334 117.655 1.00 71.30 O
TER
Atoms:
C2: (-9.062,86.507,120.916)
OP1: (-6.066,80.613,116.109)
OP2: (-4.732,82.687,116.837)
C4: (-6.940,87.449,120.720)
O5': (-7.055,82.334,117.655)
C3': (-9.722,83.601,117.631)
C1': (-9.589,84.329,119.881)
O4': (-8.890,83.103,119.745)
C5': (-8.214,81.555,118.010)
P: (-5.719,81.622,117.147)
O2: (-10.232,86.531,121.327)
C4': (-9.318,82.447,118.529)
C2': (-10.409,84.553,118.607)
O2': (-11.766,84.250,118.871)
N1: (-8.629,85.407,120.162)
N3: (-8.193,87.514,121.176)
N4: (-6.117,88.462,121.007)
C6: (-7.341,85.352,119.698)
C5: (-6.473,86.340,119.951)
O3': (-10.592,83.162,116.594)
OP1: (-6.066,80.613,116.109)
OP2: (-4.732,82.687,116.837)
C4: (-6.940,87.449,120.720)
O5': (-7.055,82.334,117.655)
C3': (-9.722,83.601,117.631)
C1': (-9.589,84.329,119.881)
O4': (-8.890,83.103,119.745)
C5': (-8.214,81.555,118.010)
P: (-5.719,81.622,117.147)
O2: (-10.232,86.531,121.327)
C4': (-9.318,82.447,118.529)
C2': (-10.409,84.553,118.607)
O2': (-11.766,84.250,118.871)
N1: (-8.629,85.407,120.162)
N3: (-8.193,87.514,121.176)
N4: (-6.117,88.462,121.007)
C6: (-7.341,85.352,119.698)
C5: (-6.473,86.340,119.951)
O3': (-10.592,83.162,116.594)
C4: (-4.492,86.053,122.837)
N3: (-5.644,85.360,123.143)
OP1: (-0.361,81.863,117.869)
OP2: (-0.753,84.208,118.848)
C2: (-5.917,84.043,122.867)
C1': (-5.122,81.939,121.893)
C3': (-4.794,81.517,119.597)
O5': (-2.074,82.267,119.632)
O4': (-3.861,81.307,121.732)
C5': (-2.359,80.880,119.883)
P: (-0.675,82.729,119.031)
C4': (-3.766,80.739,120.398)
C2': (-5.917,81.703,120.609)
O2': (-6.706,80.541,120.777)
N1: (-4.905,83.363,122.201)
O4: (-4.389,87.236,123.173)
O2: (-6.970,83.520,123.193)
C6: (-3.739,84.007,121.848)
C5: (-3.504,85.290,122.138)
O3': (-5.185,80.809,118.427)
N3: (-5.644,85.360,123.143)
OP1: (-0.361,81.863,117.869)
OP2: (-0.753,84.208,118.848)
C2: (-5.917,84.043,122.867)
C1': (-5.122,81.939,121.893)
C3': (-4.794,81.517,119.597)
O5': (-2.074,82.267,119.632)
O4': (-3.861,81.307,121.732)
C5': (-2.359,80.880,119.883)
P: (-0.675,82.729,119.031)
C4': (-3.766,80.739,120.398)
C2': (-5.917,81.703,120.609)
O2': (-6.706,80.541,120.777)
N1: (-4.905,83.363,122.201)
O4: (-4.389,87.236,123.173)
O2: (-6.970,83.520,123.193)
C6: (-3.739,84.007,121.848)
C5: (-3.504,85.290,122.138)
O3': (-5.185,80.809,118.427)
Image (generated by PyMOL):