Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B48:B47
Extra
PDB:
ATOM 1 O3' U A 47 -169.491 -43.894 41.225 1.00 3.30 O
ATOM 2 P C A 48 -170.814 -44.760 41.106 1.00 6.06 P
ATOM 3 OP1 C A 48 -170.449 -46.148 41.519 1.00 6.06 O
ATOM 4 OP2 C A 48 -171.359 -44.539 39.734 1.00 6.06 O
ATOM 5 O5' C A 48 -171.797 -44.114 42.167 1.00 6.06 O
ATOM 6 C5' C A 48 -171.384 -43.058 42.998 1.00 6.06 C
ATOM 7 C4' C A 48 -172.481 -42.035 43.176 1.00 6.06 C
ATOM 8 O4' C A 48 -172.280 -40.930 42.250 1.00 6.06 O
ATOM 9 C3' C A 48 -173.913 -42.483 42.882 1.00 6.06 C
ATOM 10 O3' C A 48 -174.504 -43.234 43.925 1.00 6.06 O
ATOM 11 C2' C A 48 -174.596 -41.147 42.659 1.00 6.06 C
ATOM 12 O2' C A 48 -174.773 -40.468 43.910 1.00 6.06 O
ATOM 13 C1' C A 48 -173.531 -40.410 41.853 1.00 6.06 C
ATOM 14 N1 C A 48 -173.675 -40.617 40.402 1.00 5.99 N
ATOM 15 C2 C A 48 -173.988 -39.512 39.624 1.00 5.99 C
ATOM 16 O2 C A 48 -174.155 -38.438 40.200 1.00 5.99 O
ATOM 17 N3 C A 48 -174.092 -39.610 38.287 1.00 5.99 N
ATOM 18 C4 C A 48 -173.890 -40.774 37.735 1.00 5.99 C
ATOM 19 N4 C A 48 -174.008 -40.812 36.431 1.00 5.99 N
ATOM 20 C5 C A 48 -173.559 -41.928 38.485 1.00 5.99 C
ATOM 21 C6 C A 48 -173.449 -41.814 39.811 1.00 5.99 C
ATOM 22 P A A 49 -175.979 -43.863 43.735 1.00 8.96 P
ATOM 23 OP1 A A 49 -176.422 -44.313 45.073 1.00 8.96 O
ATOM 24 OP2 A A 49 -175.892 -44.852 42.644 1.00 8.96 O
ATOM 25 O5' A A 49 -176.875 -42.623 43.252 1.00 8.96 O
TER
ATOM 1 O3' C B 46 -164.991 -44.383 37.045 1.00 0.17 O
ATOM 2 P U B 47 -166.307 -45.246 37.251 1.00 3.30 P
ATOM 3 OP1 U B 47 -165.907 -46.459 37.999 1.00 3.30 O
ATOM 4 OP2 U B 47 -166.934 -45.413 35.914 1.00 3.30 O
ATOM 5 O5' U B 47 -167.212 -44.283 38.160 1.00 3.30 O
ATOM 6 C5' U B 47 -166.797 -43.903 39.456 1.00 3.30 C
ATOM 7 C4' U B 47 -167.663 -42.807 40.050 1.00 3.30 C
ATOM 8 O4' U B 47 -167.611 -41.614 39.233 1.00 3.30 O
ATOM 9 C3' U B 47 -169.152 -43.070 40.164 1.00 3.30 C
ATOM 10 O3' U B 47 -169.491 -43.894 41.225 1.00 3.30 O
ATOM 11 C2' U B 47 -169.701 -41.685 40.353 1.00 3.30 C
ATOM 12 O2' U B 47 -169.491 -41.270 41.694 1.00 3.30 O
ATOM 13 C1' U B 47 -168.797 -40.870 39.438 1.00 3.30 C
ATOM 14 N1 U B 47 -169.428 -40.593 38.140 1.00 3.41 N
ATOM 15 C2 U B 47 -170.229 -39.476 38.171 1.00 3.41 C
ATOM 16 O2 U B 47 -170.376 -38.864 39.194 1.00 3.41 O
ATOM 17 N3 U B 47 -170.839 -39.104 37.009 1.00 3.41 N
ATOM 18 C4 U B 47 -170.708 -39.746 35.809 1.00 3.41 C
ATOM 19 O4 U B 47 -171.326 -39.295 34.842 1.00 3.41 O
ATOM 20 C5 U B 47 -169.847 -40.914 35.834 1.00 3.41 C
ATOM 21 C6 U B 47 -169.247 -41.306 36.979 1.00 3.41 C
ATOM 22 P C B 48 -170.814 -44.760 41.106 1.00 6.06 P
ATOM 23 OP1 C B 48 -170.449 -46.148 41.519 1.00 6.06 O
ATOM 24 OP2 C B 48 -171.359 -44.539 39.734 1.00 6.06 O
ATOM 25 O5' C B 48 -171.797 -44.114 42.167 1.00 6.06 O
TER
ATOM 2 P C A 48 -170.814 -44.760 41.106 1.00 6.06 P
ATOM 3 OP1 C A 48 -170.449 -46.148 41.519 1.00 6.06 O
ATOM 4 OP2 C A 48 -171.359 -44.539 39.734 1.00 6.06 O
ATOM 5 O5' C A 48 -171.797 -44.114 42.167 1.00 6.06 O
ATOM 6 C5' C A 48 -171.384 -43.058 42.998 1.00 6.06 C
ATOM 7 C4' C A 48 -172.481 -42.035 43.176 1.00 6.06 C
ATOM 8 O4' C A 48 -172.280 -40.930 42.250 1.00 6.06 O
ATOM 9 C3' C A 48 -173.913 -42.483 42.882 1.00 6.06 C
ATOM 10 O3' C A 48 -174.504 -43.234 43.925 1.00 6.06 O
ATOM 11 C2' C A 48 -174.596 -41.147 42.659 1.00 6.06 C
ATOM 12 O2' C A 48 -174.773 -40.468 43.910 1.00 6.06 O
ATOM 13 C1' C A 48 -173.531 -40.410 41.853 1.00 6.06 C
ATOM 14 N1 C A 48 -173.675 -40.617 40.402 1.00 5.99 N
ATOM 15 C2 C A 48 -173.988 -39.512 39.624 1.00 5.99 C
ATOM 16 O2 C A 48 -174.155 -38.438 40.200 1.00 5.99 O
ATOM 17 N3 C A 48 -174.092 -39.610 38.287 1.00 5.99 N
ATOM 18 C4 C A 48 -173.890 -40.774 37.735 1.00 5.99 C
ATOM 19 N4 C A 48 -174.008 -40.812 36.431 1.00 5.99 N
ATOM 20 C5 C A 48 -173.559 -41.928 38.485 1.00 5.99 C
ATOM 21 C6 C A 48 -173.449 -41.814 39.811 1.00 5.99 C
ATOM 22 P A A 49 -175.979 -43.863 43.735 1.00 8.96 P
ATOM 23 OP1 A A 49 -176.422 -44.313 45.073 1.00 8.96 O
ATOM 24 OP2 A A 49 -175.892 -44.852 42.644 1.00 8.96 O
ATOM 25 O5' A A 49 -176.875 -42.623 43.252 1.00 8.96 O
TER
ATOM 1 O3' C B 46 -164.991 -44.383 37.045 1.00 0.17 O
ATOM 2 P U B 47 -166.307 -45.246 37.251 1.00 3.30 P
ATOM 3 OP1 U B 47 -165.907 -46.459 37.999 1.00 3.30 O
ATOM 4 OP2 U B 47 -166.934 -45.413 35.914 1.00 3.30 O
ATOM 5 O5' U B 47 -167.212 -44.283 38.160 1.00 3.30 O
ATOM 6 C5' U B 47 -166.797 -43.903 39.456 1.00 3.30 C
ATOM 7 C4' U B 47 -167.663 -42.807 40.050 1.00 3.30 C
ATOM 8 O4' U B 47 -167.611 -41.614 39.233 1.00 3.30 O
ATOM 9 C3' U B 47 -169.152 -43.070 40.164 1.00 3.30 C
ATOM 10 O3' U B 47 -169.491 -43.894 41.225 1.00 3.30 O
ATOM 11 C2' U B 47 -169.701 -41.685 40.353 1.00 3.30 C
ATOM 12 O2' U B 47 -169.491 -41.270 41.694 1.00 3.30 O
ATOM 13 C1' U B 47 -168.797 -40.870 39.438 1.00 3.30 C
ATOM 14 N1 U B 47 -169.428 -40.593 38.140 1.00 3.41 N
ATOM 15 C2 U B 47 -170.229 -39.476 38.171 1.00 3.41 C
ATOM 16 O2 U B 47 -170.376 -38.864 39.194 1.00 3.41 O
ATOM 17 N3 U B 47 -170.839 -39.104 37.009 1.00 3.41 N
ATOM 18 C4 U B 47 -170.708 -39.746 35.809 1.00 3.41 C
ATOM 19 O4 U B 47 -171.326 -39.295 34.842 1.00 3.41 O
ATOM 20 C5 U B 47 -169.847 -40.914 35.834 1.00 3.41 C
ATOM 21 C6 U B 47 -169.247 -41.306 36.979 1.00 3.41 C
ATOM 22 P C B 48 -170.814 -44.760 41.106 1.00 6.06 P
ATOM 23 OP1 C B 48 -170.449 -46.148 41.519 1.00 6.06 O
ATOM 24 OP2 C B 48 -171.359 -44.539 39.734 1.00 6.06 O
ATOM 25 O5' C B 48 -171.797 -44.114 42.167 1.00 6.06 O
TER
Atoms:
C2: (-173.988,-39.512,39.624)
OP1: (-170.449,-46.148,41.519)
OP2: (-171.359,-44.539,39.734)
C4: (-173.890,-40.774,37.735)
O5': (-171.797,-44.114,42.167)
C3': (-173.913,-42.483,42.882)
C1': (-173.531,-40.410,41.853)
O4': (-172.280,-40.930,42.250)
C5': (-171.384,-43.058,42.998)
P: (-170.814,-44.760,41.106)
O2: (-174.155,-38.438,40.200)
C4': (-172.481,-42.035,43.176)
C2': (-174.596,-41.147,42.659)
O2': (-174.773,-40.468,43.910)
N1: (-173.675,-40.617,40.402)
N3: (-174.092,-39.610,38.287)
N4: (-174.008,-40.812,36.431)
C6: (-173.449,-41.814,39.811)
C5: (-173.559,-41.928,38.485)
O3': (-174.504,-43.234,43.925)
OP1: (-170.449,-46.148,41.519)
OP2: (-171.359,-44.539,39.734)
C4: (-173.890,-40.774,37.735)
O5': (-171.797,-44.114,42.167)
C3': (-173.913,-42.483,42.882)
C1': (-173.531,-40.410,41.853)
O4': (-172.280,-40.930,42.250)
C5': (-171.384,-43.058,42.998)
P: (-170.814,-44.760,41.106)
O2: (-174.155,-38.438,40.200)
C4': (-172.481,-42.035,43.176)
C2': (-174.596,-41.147,42.659)
O2': (-174.773,-40.468,43.910)
N1: (-173.675,-40.617,40.402)
N3: (-174.092,-39.610,38.287)
N4: (-174.008,-40.812,36.431)
C6: (-173.449,-41.814,39.811)
C5: (-173.559,-41.928,38.485)
O3': (-174.504,-43.234,43.925)
C4: (-170.708,-39.746,35.809)
N3: (-170.839,-39.104,37.009)
OP1: (-165.907,-46.459,37.999)
OP2: (-166.934,-45.413,35.914)
C2: (-170.229,-39.476,38.171)
C1': (-168.797,-40.870,39.438)
C3': (-169.152,-43.070,40.164)
O5': (-167.212,-44.283,38.160)
O4': (-167.611,-41.614,39.233)
C5': (-166.797,-43.903,39.456)
P: (-166.307,-45.246,37.251)
C4': (-167.663,-42.807,40.050)
C2': (-169.701,-41.685,40.353)
O2': (-169.491,-41.270,41.694)
N1: (-169.428,-40.593,38.140)
O4: (-171.326,-39.295,34.842)
O2: (-170.376,-38.864,39.194)
C6: (-169.247,-41.306,36.979)
C5: (-169.847,-40.914,35.834)
O3': (-169.491,-43.894,41.225)
N3: (-170.839,-39.104,37.009)
OP1: (-165.907,-46.459,37.999)
OP2: (-166.934,-45.413,35.914)
C2: (-170.229,-39.476,38.171)
C1': (-168.797,-40.870,39.438)
C3': (-169.152,-43.070,40.164)
O5': (-167.212,-44.283,38.160)
O4': (-167.611,-41.614,39.233)
C5': (-166.797,-43.903,39.456)
P: (-166.307,-45.246,37.251)
C4': (-167.663,-42.807,40.050)
C2': (-169.701,-41.685,40.353)
O2': (-169.491,-41.270,41.694)
N1: (-169.428,-40.593,38.140)
O4: (-171.326,-39.295,34.842)
O2: (-170.376,-38.864,39.194)
C6: (-169.247,-41.306,36.979)
C5: (-169.847,-40.914,35.834)
O3': (-169.491,-43.894,41.225)
Image (generated by PyMOL):