Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:A55:A54
Extra
PDB:
ATOM 1 O3' U A 54 4.845 12.947 30.351 1.00 33.72 O
ATOM 2 P C A 55 4.140 11.631 30.968 1.00 37.48 P
ATOM 3 OP1 C A 55 4.821 11.417 32.270 1.00 35.95 O
ATOM 4 OP2 C A 55 4.209 10.571 29.930 1.00 33.98 O
ATOM 5 O5' C A 55 2.617 12.044 31.214 1.00 33.04 O
ATOM 6 C5' C A 55 2.226 12.970 32.232 1.00 30.43 C
ATOM 7 C4' C A 55 0.763 13.315 32.105 1.00 28.63 C
ATOM 8 O4' C A 55 0.494 13.777 30.757 1.00 29.41 O
ATOM 9 C3' C A 55 -0.226 12.178 32.304 1.00 26.34 C
ATOM 10 O3' C A 55 -0.491 11.930 33.671 1.00 25.02 O
ATOM 11 C2' C A 55 -1.445 12.662 31.525 1.00 26.13 C
ATOM 12 O2' C A 55 -2.129 13.657 32.273 1.00 25.23 O
ATOM 13 C1' C A 55 -0.788 13.360 30.338 1.00 27.65 C
ATOM 14 N1 C A 55 -0.640 12.466 29.170 1.00 27.51 N
ATOM 15 C2 C A 55 -1.761 12.189 28.382 1.00 26.58 C
ATOM 16 O2 C A 55 -2.851 12.695 28.685 1.00 25.91 O
ATOM 17 N3 C A 55 -1.632 11.373 27.311 1.00 26.83 N
ATOM 18 C4 C A 55 -0.444 10.845 27.016 1.00 27.45 C
ATOM 19 N4 C A 55 -0.362 10.046 25.950 1.00 27.24 N
ATOM 20 C5 C A 55 0.714 11.114 27.801 1.00 28.67 C
ATOM 21 C6 C A 55 0.573 11.922 28.857 1.00 28.15 C
ATOM 22 P C A 56 -1.050 10.502 34.148 1.00 24.88 P
ATOM 23 OP1 C A 56 -1.029 10.554 35.630 1.00 24.29 O
ATOM 24 OP2 C A 56 -0.261 9.459 33.449 1.00 24.97 O
ATOM 25 O5' C A 56 -2.547 10.492 33.607 1.00 23.59 O
TER
ATOM 1 O3' A B 53 8.461 13.829 26.067 1.00 42.56 O
ATOM 2 P U B 54 8.122 12.478 26.873 1.00 43.25 P
ATOM 3 OP1 U B 54 9.403 11.997 27.452 1.00 42.50 O
ATOM 4 OP2 U B 54 7.354 11.598 25.955 1.00 40.57 O
ATOM 5 O5' U B 54 7.168 13.059 28.009 1.00 40.81 O
ATOM 6 C5' U B 54 6.305 14.110 27.592 1.00 38.82 C
ATOM 7 C4' U B 54 5.299 14.614 28.586 1.00 36.95 C
ATOM 8 O4' U B 54 4.443 15.473 27.797 1.00 35.64 O
ATOM 9 C3' U B 54 4.346 13.590 29.189 1.00 33.90 C
ATOM 10 O3' U B 54 4.845 12.947 30.351 1.00 33.72 O
ATOM 11 C2' U B 54 3.081 14.416 29.403 1.00 33.11 C
ATOM 12 O2' U B 54 3.246 15.256 30.539 1.00 31.93 O
ATOM 13 C1' U B 54 3.098 15.309 28.169 1.00 33.17 C
ATOM 14 N1 U B 54 2.472 14.619 27.021 1.00 31.65 N
ATOM 15 C2 U B 54 1.112 14.751 26.833 1.00 30.33 C
ATOM 16 O2 U B 54 0.401 15.410 27.574 1.00 31.00 O
ATOM 17 N3 U B 54 0.616 14.078 25.745 1.00 29.36 N
ATOM 18 C4 U B 54 1.325 13.307 24.846 1.00 30.61 C
ATOM 19 O4 U B 54 0.734 12.763 23.913 1.00 30.44 O
ATOM 20 C5 U B 54 2.728 13.221 25.106 1.00 32.02 C
ATOM 21 C6 U B 54 3.235 13.865 26.158 1.00 32.57 C
ATOM 22 P C B 55 4.140 11.631 30.968 1.00 37.48 P
ATOM 23 OP1 C B 55 4.821 11.417 32.270 1.00 35.95 O
ATOM 24 OP2 C B 55 4.209 10.571 29.930 1.00 33.98 O
ATOM 25 O5' C B 55 2.617 12.044 31.214 1.00 33.04 O
TER
ATOM 2 P C A 55 4.140 11.631 30.968 1.00 37.48 P
ATOM 3 OP1 C A 55 4.821 11.417 32.270 1.00 35.95 O
ATOM 4 OP2 C A 55 4.209 10.571 29.930 1.00 33.98 O
ATOM 5 O5' C A 55 2.617 12.044 31.214 1.00 33.04 O
ATOM 6 C5' C A 55 2.226 12.970 32.232 1.00 30.43 C
ATOM 7 C4' C A 55 0.763 13.315 32.105 1.00 28.63 C
ATOM 8 O4' C A 55 0.494 13.777 30.757 1.00 29.41 O
ATOM 9 C3' C A 55 -0.226 12.178 32.304 1.00 26.34 C
ATOM 10 O3' C A 55 -0.491 11.930 33.671 1.00 25.02 O
ATOM 11 C2' C A 55 -1.445 12.662 31.525 1.00 26.13 C
ATOM 12 O2' C A 55 -2.129 13.657 32.273 1.00 25.23 O
ATOM 13 C1' C A 55 -0.788 13.360 30.338 1.00 27.65 C
ATOM 14 N1 C A 55 -0.640 12.466 29.170 1.00 27.51 N
ATOM 15 C2 C A 55 -1.761 12.189 28.382 1.00 26.58 C
ATOM 16 O2 C A 55 -2.851 12.695 28.685 1.00 25.91 O
ATOM 17 N3 C A 55 -1.632 11.373 27.311 1.00 26.83 N
ATOM 18 C4 C A 55 -0.444 10.845 27.016 1.00 27.45 C
ATOM 19 N4 C A 55 -0.362 10.046 25.950 1.00 27.24 N
ATOM 20 C5 C A 55 0.714 11.114 27.801 1.00 28.67 C
ATOM 21 C6 C A 55 0.573 11.922 28.857 1.00 28.15 C
ATOM 22 P C A 56 -1.050 10.502 34.148 1.00 24.88 P
ATOM 23 OP1 C A 56 -1.029 10.554 35.630 1.00 24.29 O
ATOM 24 OP2 C A 56 -0.261 9.459 33.449 1.00 24.97 O
ATOM 25 O5' C A 56 -2.547 10.492 33.607 1.00 23.59 O
TER
ATOM 1 O3' A B 53 8.461 13.829 26.067 1.00 42.56 O
ATOM 2 P U B 54 8.122 12.478 26.873 1.00 43.25 P
ATOM 3 OP1 U B 54 9.403 11.997 27.452 1.00 42.50 O
ATOM 4 OP2 U B 54 7.354 11.598 25.955 1.00 40.57 O
ATOM 5 O5' U B 54 7.168 13.059 28.009 1.00 40.81 O
ATOM 6 C5' U B 54 6.305 14.110 27.592 1.00 38.82 C
ATOM 7 C4' U B 54 5.299 14.614 28.586 1.00 36.95 C
ATOM 8 O4' U B 54 4.443 15.473 27.797 1.00 35.64 O
ATOM 9 C3' U B 54 4.346 13.590 29.189 1.00 33.90 C
ATOM 10 O3' U B 54 4.845 12.947 30.351 1.00 33.72 O
ATOM 11 C2' U B 54 3.081 14.416 29.403 1.00 33.11 C
ATOM 12 O2' U B 54 3.246 15.256 30.539 1.00 31.93 O
ATOM 13 C1' U B 54 3.098 15.309 28.169 1.00 33.17 C
ATOM 14 N1 U B 54 2.472 14.619 27.021 1.00 31.65 N
ATOM 15 C2 U B 54 1.112 14.751 26.833 1.00 30.33 C
ATOM 16 O2 U B 54 0.401 15.410 27.574 1.00 31.00 O
ATOM 17 N3 U B 54 0.616 14.078 25.745 1.00 29.36 N
ATOM 18 C4 U B 54 1.325 13.307 24.846 1.00 30.61 C
ATOM 19 O4 U B 54 0.734 12.763 23.913 1.00 30.44 O
ATOM 20 C5 U B 54 2.728 13.221 25.106 1.00 32.02 C
ATOM 21 C6 U B 54 3.235 13.865 26.158 1.00 32.57 C
ATOM 22 P C B 55 4.140 11.631 30.968 1.00 37.48 P
ATOM 23 OP1 C B 55 4.821 11.417 32.270 1.00 35.95 O
ATOM 24 OP2 C B 55 4.209 10.571 29.930 1.00 33.98 O
ATOM 25 O5' C B 55 2.617 12.044 31.214 1.00 33.04 O
TER
Atoms:
C2: (-1.761,12.189,28.382)
OP1: (4.821,11.417,32.270)
OP2: (4.209,10.571,29.930)
C4: (-0.444,10.845,27.016)
O5': (2.617,12.044,31.214)
C3': (-0.226,12.178,32.304)
C1': (-0.788,13.360,30.338)
O4': (0.494,13.777,30.757)
C5': (2.226,12.970,32.232)
P: (4.140,11.631,30.968)
O2: (-2.851,12.695,28.685)
C4': (0.763,13.315,32.105)
C2': (-1.445,12.662,31.525)
O2': (-2.129,13.657,32.273)
N1: (-0.640,12.466,29.170)
N3: (-1.632,11.373,27.311)
N4: (-0.362,10.046,25.950)
C6: (0.573,11.922,28.857)
C5: (0.714,11.114,27.801)
O3': (-0.491,11.930,33.671)
OP1: (4.821,11.417,32.270)
OP2: (4.209,10.571,29.930)
C4: (-0.444,10.845,27.016)
O5': (2.617,12.044,31.214)
C3': (-0.226,12.178,32.304)
C1': (-0.788,13.360,30.338)
O4': (0.494,13.777,30.757)
C5': (2.226,12.970,32.232)
P: (4.140,11.631,30.968)
O2: (-2.851,12.695,28.685)
C4': (0.763,13.315,32.105)
C2': (-1.445,12.662,31.525)
O2': (-2.129,13.657,32.273)
N1: (-0.640,12.466,29.170)
N3: (-1.632,11.373,27.311)
N4: (-0.362,10.046,25.950)
C6: (0.573,11.922,28.857)
C5: (0.714,11.114,27.801)
O3': (-0.491,11.930,33.671)
C4: (1.325,13.307,24.846)
N3: (0.616,14.078,25.745)
OP1: (9.403,11.997,27.452)
OP2: (7.354,11.598,25.955)
C2: (1.112,14.751,26.833)
C1': (3.098,15.309,28.169)
C3': (4.346,13.590,29.189)
O5': (7.168,13.059,28.009)
O4': (4.443,15.473,27.797)
C5': (6.305,14.110,27.592)
P: (8.122,12.478,26.873)
C4': (5.299,14.614,28.586)
C2': (3.081,14.416,29.403)
O2': (3.246,15.256,30.539)
N1: (2.472,14.619,27.021)
O4: (0.734,12.763,23.913)
O2: (0.401,15.410,27.574)
C6: (3.235,13.865,26.158)
C5: (2.728,13.221,25.106)
O3': (4.845,12.947,30.351)
N3: (0.616,14.078,25.745)
OP1: (9.403,11.997,27.452)
OP2: (7.354,11.598,25.955)
C2: (1.112,14.751,26.833)
C1': (3.098,15.309,28.169)
C3': (4.346,13.590,29.189)
O5': (7.168,13.059,28.009)
O4': (4.443,15.473,27.797)
C5': (6.305,14.110,27.592)
P: (8.122,12.478,26.873)
C4': (5.299,14.614,28.586)
C2': (3.081,14.416,29.403)
O2': (3.246,15.256,30.539)
N1: (2.472,14.619,27.021)
O4: (0.734,12.763,23.913)
O2: (0.401,15.410,27.574)
C6: (3.235,13.865,26.158)
C5: (2.728,13.221,25.106)
O3': (4.845,12.947,30.351)
Image (generated by PyMOL):