Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNS:B5:B4
Extra
PDB:
ATOM 1 O3' U A 4 -9.406 6.875 18.198 1.00 32.75 O
ATOM 2 P C A 5 -8.892 8.292 17.655 1.00 36.99 P
ATOM 3 OP1 C A 5 -9.446 9.333 18.551 1.00 39.36 O
ATOM 4 OP2 C A 5 -9.137 8.369 16.199 1.00 37.81 O
ATOM 5 O5' C A 5 -7.310 8.245 17.850 1.00 31.91 O
ATOM 6 C5' C A 5 -6.724 8.161 19.143 1.00 31.49 C
ATOM 7 C4' C A 5 -5.251 7.871 19.004 1.00 30.18 C
ATOM 8 O4' C A 5 -5.103 6.564 18.394 1.00 30.73 O
ATOM 9 C3' C A 5 -4.520 8.814 18.059 1.00 32.03 C
ATOM 10 O3' C A 5 -4.068 9.968 18.763 1.00 30.40 O
ATOM 11 C2' C A 5 -3.353 7.962 17.574 1.00 32.85 C
ATOM 12 O2' C A 5 -2.242 7.979 18.455 1.00 31.09 O
ATOM 13 C1' C A 5 -3.979 6.564 17.538 1.00 33.01 C
ATOM 14 N1 C A 5 -4.410 6.127 16.196 1.00 34.52 N
ATOM 15 C2 C A 5 -3.472 5.521 15.368 1.00 34.91 C
ATOM 16 O2 C A 5 -2.304 5.398 15.783 1.00 32.85 O
ATOM 17 N3 C A 5 -3.851 5.084 14.136 1.00 32.32 N
ATOM 18 C4 C A 5 -5.112 5.243 13.734 1.00 34.78 C
ATOM 19 N4 C A 5 -5.441 4.793 12.513 1.00 30.59 N
ATOM 20 C5 C A 5 -6.091 5.871 14.558 1.00 33.46 C
ATOM 21 C6 C A 5 -5.701 6.299 15.770 1.00 34.74 C
ATOM 22 P A A 6 -4.391 11.428 18.191 1.00 35.69 P
ATOM 23 OP1 A A 6 -5.852 11.520 17.971 1.00 33.35 O
ATOM 24 OP2 A A 6 -3.464 11.727 17.081 1.00 34.42 O
ATOM 25 O5' A A 6 -4.025 12.389 19.402 1.00 34.30 O
TER
ATOM 1 O3' G B 3 -12.706 4.088 13.957 1.00 36.19 O
ATOM 2 P U B 4 -11.612 5.273 14.012 1.00 37.59 P
ATOM 3 OP1 U B 4 -12.337 6.521 14.317 1.00 35.78 O
ATOM 4 OP2 U B 4 -10.767 5.188 12.805 1.00 35.10 O
ATOM 5 O5' U B 4 -10.722 4.884 15.273 1.00 33.11 O
ATOM 6 C5' U B 4 -11.288 4.877 16.572 1.00 33.72 C
ATOM 7 C4' U B 4 -10.208 4.688 17.602 1.00 33.60 C
ATOM 8 O4' U B 4 -9.587 3.395 17.410 1.00 34.28 O
ATOM 9 C3' U B 4 -9.068 5.682 17.495 1.00 32.95 C
ATOM 10 O3' U B 4 -9.406 6.875 18.198 1.00 32.75 O
ATOM 11 C2' U B 4 -7.931 4.924 18.167 1.00 33.23 C
ATOM 12 O2' U B 4 -8.039 4.951 19.567 1.00 30.77 O
ATOM 13 C1' U B 4 -8.209 3.488 17.717 1.00 34.80 C
ATOM 14 N1 U B 4 -7.430 3.054 16.550 1.00 33.31 N
ATOM 15 C2 U B 4 -6.093 2.759 16.752 1.00 32.98 C
ATOM 16 O2 U B 4 -5.548 2.889 17.839 1.00 34.34 O
ATOM 17 N3 U B 4 -5.421 2.305 15.640 1.00 30.92 N
ATOM 18 C4 U B 4 -5.947 2.119 14.373 1.00 31.95 C
ATOM 19 O4 U B 4 -5.248 1.614 13.492 1.00 29.53 O
ATOM 20 C5 U B 4 -7.325 2.481 14.243 1.00 29.22 C
ATOM 21 C6 U B 4 -8.003 2.929 15.306 1.00 30.26 C
ATOM 22 P C B 5 -8.892 8.292 17.655 1.00 36.99 P
ATOM 23 OP1 C B 5 -9.446 9.333 18.551 1.00 39.36 O
ATOM 24 OP2 C B 5 -9.137 8.369 16.199 1.00 37.81 O
ATOM 25 O5' C B 5 -7.310 8.245 17.850 1.00 31.91 O
TER
ATOM 2 P C A 5 -8.892 8.292 17.655 1.00 36.99 P
ATOM 3 OP1 C A 5 -9.446 9.333 18.551 1.00 39.36 O
ATOM 4 OP2 C A 5 -9.137 8.369 16.199 1.00 37.81 O
ATOM 5 O5' C A 5 -7.310 8.245 17.850 1.00 31.91 O
ATOM 6 C5' C A 5 -6.724 8.161 19.143 1.00 31.49 C
ATOM 7 C4' C A 5 -5.251 7.871 19.004 1.00 30.18 C
ATOM 8 O4' C A 5 -5.103 6.564 18.394 1.00 30.73 O
ATOM 9 C3' C A 5 -4.520 8.814 18.059 1.00 32.03 C
ATOM 10 O3' C A 5 -4.068 9.968 18.763 1.00 30.40 O
ATOM 11 C2' C A 5 -3.353 7.962 17.574 1.00 32.85 C
ATOM 12 O2' C A 5 -2.242 7.979 18.455 1.00 31.09 O
ATOM 13 C1' C A 5 -3.979 6.564 17.538 1.00 33.01 C
ATOM 14 N1 C A 5 -4.410 6.127 16.196 1.00 34.52 N
ATOM 15 C2 C A 5 -3.472 5.521 15.368 1.00 34.91 C
ATOM 16 O2 C A 5 -2.304 5.398 15.783 1.00 32.85 O
ATOM 17 N3 C A 5 -3.851 5.084 14.136 1.00 32.32 N
ATOM 18 C4 C A 5 -5.112 5.243 13.734 1.00 34.78 C
ATOM 19 N4 C A 5 -5.441 4.793 12.513 1.00 30.59 N
ATOM 20 C5 C A 5 -6.091 5.871 14.558 1.00 33.46 C
ATOM 21 C6 C A 5 -5.701 6.299 15.770 1.00 34.74 C
ATOM 22 P A A 6 -4.391 11.428 18.191 1.00 35.69 P
ATOM 23 OP1 A A 6 -5.852 11.520 17.971 1.00 33.35 O
ATOM 24 OP2 A A 6 -3.464 11.727 17.081 1.00 34.42 O
ATOM 25 O5' A A 6 -4.025 12.389 19.402 1.00 34.30 O
TER
ATOM 1 O3' G B 3 -12.706 4.088 13.957 1.00 36.19 O
ATOM 2 P U B 4 -11.612 5.273 14.012 1.00 37.59 P
ATOM 3 OP1 U B 4 -12.337 6.521 14.317 1.00 35.78 O
ATOM 4 OP2 U B 4 -10.767 5.188 12.805 1.00 35.10 O
ATOM 5 O5' U B 4 -10.722 4.884 15.273 1.00 33.11 O
ATOM 6 C5' U B 4 -11.288 4.877 16.572 1.00 33.72 C
ATOM 7 C4' U B 4 -10.208 4.688 17.602 1.00 33.60 C
ATOM 8 O4' U B 4 -9.587 3.395 17.410 1.00 34.28 O
ATOM 9 C3' U B 4 -9.068 5.682 17.495 1.00 32.95 C
ATOM 10 O3' U B 4 -9.406 6.875 18.198 1.00 32.75 O
ATOM 11 C2' U B 4 -7.931 4.924 18.167 1.00 33.23 C
ATOM 12 O2' U B 4 -8.039 4.951 19.567 1.00 30.77 O
ATOM 13 C1' U B 4 -8.209 3.488 17.717 1.00 34.80 C
ATOM 14 N1 U B 4 -7.430 3.054 16.550 1.00 33.31 N
ATOM 15 C2 U B 4 -6.093 2.759 16.752 1.00 32.98 C
ATOM 16 O2 U B 4 -5.548 2.889 17.839 1.00 34.34 O
ATOM 17 N3 U B 4 -5.421 2.305 15.640 1.00 30.92 N
ATOM 18 C4 U B 4 -5.947 2.119 14.373 1.00 31.95 C
ATOM 19 O4 U B 4 -5.248 1.614 13.492 1.00 29.53 O
ATOM 20 C5 U B 4 -7.325 2.481 14.243 1.00 29.22 C
ATOM 21 C6 U B 4 -8.003 2.929 15.306 1.00 30.26 C
ATOM 22 P C B 5 -8.892 8.292 17.655 1.00 36.99 P
ATOM 23 OP1 C B 5 -9.446 9.333 18.551 1.00 39.36 O
ATOM 24 OP2 C B 5 -9.137 8.369 16.199 1.00 37.81 O
ATOM 25 O5' C B 5 -7.310 8.245 17.850 1.00 31.91 O
TER
Atoms:
C2: (-3.472,5.521,15.368)
OP1: (-9.446,9.333,18.551)
OP2: (-9.137,8.369,16.199)
C4: (-5.112,5.243,13.734)
O5': (-7.310,8.245,17.850)
C3': (-4.520,8.814,18.059)
C1': (-3.979,6.564,17.538)
O4': (-5.103,6.564,18.394)
C5': (-6.724,8.161,19.143)
P: (-8.892,8.292,17.655)
O2: (-2.304,5.398,15.783)
C4': (-5.251,7.871,19.004)
C2': (-3.353,7.962,17.574)
O2': (-2.242,7.979,18.455)
N1: (-4.410,6.127,16.196)
N3: (-3.851,5.084,14.136)
N4: (-5.441,4.793,12.513)
C6: (-5.701,6.299,15.770)
C5: (-6.091,5.871,14.558)
O3': (-4.068,9.968,18.763)
OP1: (-9.446,9.333,18.551)
OP2: (-9.137,8.369,16.199)
C4: (-5.112,5.243,13.734)
O5': (-7.310,8.245,17.850)
C3': (-4.520,8.814,18.059)
C1': (-3.979,6.564,17.538)
O4': (-5.103,6.564,18.394)
C5': (-6.724,8.161,19.143)
P: (-8.892,8.292,17.655)
O2: (-2.304,5.398,15.783)
C4': (-5.251,7.871,19.004)
C2': (-3.353,7.962,17.574)
O2': (-2.242,7.979,18.455)
N1: (-4.410,6.127,16.196)
N3: (-3.851,5.084,14.136)
N4: (-5.441,4.793,12.513)
C6: (-5.701,6.299,15.770)
C5: (-6.091,5.871,14.558)
O3': (-4.068,9.968,18.763)
C4: (-5.947,2.119,14.373)
N3: (-5.421,2.305,15.640)
OP1: (-12.337,6.521,14.317)
OP2: (-10.767,5.188,12.805)
C2: (-6.093,2.759,16.752)
C1': (-8.209,3.488,17.717)
C3': (-9.068,5.682,17.495)
O5': (-10.722,4.884,15.273)
O4': (-9.587,3.395,17.410)
C5': (-11.288,4.877,16.572)
P: (-11.612,5.273,14.012)
C4': (-10.208,4.688,17.602)
C2': (-7.931,4.924,18.167)
O2': (-8.039,4.951,19.567)
N1: (-7.430,3.054,16.550)
O4: (-5.248,1.614,13.492)
O2: (-5.548,2.889,17.839)
C6: (-8.003,2.929,15.306)
C5: (-7.325,2.481,14.243)
O3': (-9.406,6.875,18.198)
N3: (-5.421,2.305,15.640)
OP1: (-12.337,6.521,14.317)
OP2: (-10.767,5.188,12.805)
C2: (-6.093,2.759,16.752)
C1': (-8.209,3.488,17.717)
C3': (-9.068,5.682,17.495)
O5': (-10.722,4.884,15.273)
O4': (-9.587,3.395,17.410)
C5': (-11.288,4.877,16.572)
P: (-11.612,5.273,14.012)
C4': (-10.208,4.688,17.602)
C2': (-7.931,4.924,18.167)
O2': (-8.039,4.951,19.567)
N1: (-7.430,3.054,16.550)
O4: (-5.248,1.614,13.492)
O2: (-5.548,2.889,17.839)
C6: (-8.003,2.929,15.306)
C5: (-7.325,2.481,14.243)
O3': (-9.406,6.875,18.198)
Image (generated by PyMOL):