Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1226:A1225
Extra
PDB:
ATOM 1 O3' U A1225 2.131 98.423 84.762 1.00 34.09 O
ATOM 2 P C A1226 2.960 97.681 83.609 1.00 35.90 P
ATOM 3 OP1 C A1226 2.030 97.537 82.461 1.00 37.86 O
ATOM 4 OP2 C A1226 3.603 96.478 84.185 1.00 33.68 O
ATOM 5 O5' C A1226 4.099 98.720 83.219 1.00 34.44 O
ATOM 6 C5' C A1226 3.778 100.059 82.817 1.00 34.92 C
ATOM 7 C4' C A1226 5.030 100.901 82.783 1.00 35.76 C
ATOM 8 O4' C A1226 5.562 101.029 84.130 1.00 36.81 O
ATOM 9 C3' C A1226 6.196 100.348 81.973 1.00 35.28 C
ATOM 10 O3' C A1226 6.065 100.676 80.599 1.00 35.79 O
ATOM 11 C2' C A1226 7.365 101.094 82.586 1.00 35.83 C
ATOM 12 O2' C A1226 7.402 102.421 82.102 1.00 36.44 O
ATOM 13 C1' C A1226 6.978 101.101 84.074 1.00 36.33 C
ATOM 14 N1 C A1226 7.553 99.962 84.836 1.00 36.11 N
ATOM 15 C2 C A1226 8.898 100.029 85.259 1.00 36.40 C
ATOM 16 O2 C A1226 9.534 101.081 85.098 1.00 36.12 O
ATOM 17 N3 C A1226 9.462 98.943 85.839 1.00 35.12 N
ATOM 18 C4 C A1226 8.738 97.836 86.034 1.00 34.33 C
ATOM 19 N4 C A1226 9.355 96.776 86.548 1.00 31.96 N
ATOM 20 C5 C A1226 7.355 97.768 85.691 1.00 35.50 C
ATOM 21 C6 C A1226 6.810 98.841 85.097 1.00 35.31 C
ATOM 22 P C A1227 6.934 99.898 79.486 1.00 39.10 P
ATOM 23 OP1 C A1227 6.550 100.503 78.166 1.00 37.12 O
ATOM 24 OP2 C A1227 6.790 98.443 79.691 1.00 38.21 O
ATOM 25 O5' C A1227 8.453 100.240 79.834 1.00 38.31 O
TER
ATOM 1 O3' G B1224 0.888 95.429 89.889 1.00 34.26 O
ATOM 2 P U B1225 1.512 94.989 88.489 1.00 34.20 P
ATOM 3 OP1 U B1225 0.452 94.369 87.654 1.00 33.55 O
ATOM 4 OP2 U B1225 2.729 94.218 88.814 1.00 34.37 O
ATOM 5 O5' U B1225 1.926 96.372 87.824 1.00 33.74 O
ATOM 6 C5' U B1225 0.933 97.354 87.514 1.00 34.11 C
ATOM 7 C4' U B1225 1.584 98.643 87.101 1.00 34.32 C
ATOM 8 O4' U B1225 2.246 99.262 88.231 1.00 34.16 O
ATOM 9 C3' U B1225 2.678 98.530 86.059 1.00 33.92 C
ATOM 10 O3' U B1225 2.131 98.423 84.762 1.00 34.09 O
ATOM 11 C2' U B1225 3.389 99.854 86.248 1.00 34.67 C
ATOM 12 O2' U B1225 2.601 100.895 85.698 1.00 34.60 O
ATOM 13 C1' U B1225 3.403 99.954 87.779 1.00 34.86 C
ATOM 14 N1 U B1225 4.594 99.306 88.367 1.00 36.31 N
ATOM 15 C2 U B1225 5.781 100.020 88.388 1.00 35.45 C
ATOM 16 O2 U B1225 5.863 101.176 88.021 1.00 37.59 O
ATOM 17 N3 U B1225 6.868 99.328 88.860 1.00 33.72 N
ATOM 18 C4 U B1225 6.902 98.026 89.317 1.00 36.00 C
ATOM 19 O4 U B1225 7.996 97.460 89.449 1.00 35.81 O
ATOM 20 C5 U B1225 5.627 97.376 89.327 1.00 37.08 C
ATOM 21 C6 U B1225 4.548 98.014 88.859 1.00 36.35 C
ATOM 22 P C B1226 2.960 97.681 83.609 1.00 35.90 P
ATOM 23 OP1 C B1226 2.030 97.537 82.461 1.00 37.86 O
ATOM 24 OP2 C B1226 3.603 96.478 84.185 1.00 33.68 O
ATOM 25 O5' C B1226 4.099 98.720 83.219 1.00 34.44 O
TER
ATOM 2 P C A1226 2.960 97.681 83.609 1.00 35.90 P
ATOM 3 OP1 C A1226 2.030 97.537 82.461 1.00 37.86 O
ATOM 4 OP2 C A1226 3.603 96.478 84.185 1.00 33.68 O
ATOM 5 O5' C A1226 4.099 98.720 83.219 1.00 34.44 O
ATOM 6 C5' C A1226 3.778 100.059 82.817 1.00 34.92 C
ATOM 7 C4' C A1226 5.030 100.901 82.783 1.00 35.76 C
ATOM 8 O4' C A1226 5.562 101.029 84.130 1.00 36.81 O
ATOM 9 C3' C A1226 6.196 100.348 81.973 1.00 35.28 C
ATOM 10 O3' C A1226 6.065 100.676 80.599 1.00 35.79 O
ATOM 11 C2' C A1226 7.365 101.094 82.586 1.00 35.83 C
ATOM 12 O2' C A1226 7.402 102.421 82.102 1.00 36.44 O
ATOM 13 C1' C A1226 6.978 101.101 84.074 1.00 36.33 C
ATOM 14 N1 C A1226 7.553 99.962 84.836 1.00 36.11 N
ATOM 15 C2 C A1226 8.898 100.029 85.259 1.00 36.40 C
ATOM 16 O2 C A1226 9.534 101.081 85.098 1.00 36.12 O
ATOM 17 N3 C A1226 9.462 98.943 85.839 1.00 35.12 N
ATOM 18 C4 C A1226 8.738 97.836 86.034 1.00 34.33 C
ATOM 19 N4 C A1226 9.355 96.776 86.548 1.00 31.96 N
ATOM 20 C5 C A1226 7.355 97.768 85.691 1.00 35.50 C
ATOM 21 C6 C A1226 6.810 98.841 85.097 1.00 35.31 C
ATOM 22 P C A1227 6.934 99.898 79.486 1.00 39.10 P
ATOM 23 OP1 C A1227 6.550 100.503 78.166 1.00 37.12 O
ATOM 24 OP2 C A1227 6.790 98.443 79.691 1.00 38.21 O
ATOM 25 O5' C A1227 8.453 100.240 79.834 1.00 38.31 O
TER
ATOM 1 O3' G B1224 0.888 95.429 89.889 1.00 34.26 O
ATOM 2 P U B1225 1.512 94.989 88.489 1.00 34.20 P
ATOM 3 OP1 U B1225 0.452 94.369 87.654 1.00 33.55 O
ATOM 4 OP2 U B1225 2.729 94.218 88.814 1.00 34.37 O
ATOM 5 O5' U B1225 1.926 96.372 87.824 1.00 33.74 O
ATOM 6 C5' U B1225 0.933 97.354 87.514 1.00 34.11 C
ATOM 7 C4' U B1225 1.584 98.643 87.101 1.00 34.32 C
ATOM 8 O4' U B1225 2.246 99.262 88.231 1.00 34.16 O
ATOM 9 C3' U B1225 2.678 98.530 86.059 1.00 33.92 C
ATOM 10 O3' U B1225 2.131 98.423 84.762 1.00 34.09 O
ATOM 11 C2' U B1225 3.389 99.854 86.248 1.00 34.67 C
ATOM 12 O2' U B1225 2.601 100.895 85.698 1.00 34.60 O
ATOM 13 C1' U B1225 3.403 99.954 87.779 1.00 34.86 C
ATOM 14 N1 U B1225 4.594 99.306 88.367 1.00 36.31 N
ATOM 15 C2 U B1225 5.781 100.020 88.388 1.00 35.45 C
ATOM 16 O2 U B1225 5.863 101.176 88.021 1.00 37.59 O
ATOM 17 N3 U B1225 6.868 99.328 88.860 1.00 33.72 N
ATOM 18 C4 U B1225 6.902 98.026 89.317 1.00 36.00 C
ATOM 19 O4 U B1225 7.996 97.460 89.449 1.00 35.81 O
ATOM 20 C5 U B1225 5.627 97.376 89.327 1.00 37.08 C
ATOM 21 C6 U B1225 4.548 98.014 88.859 1.00 36.35 C
ATOM 22 P C B1226 2.960 97.681 83.609 1.00 35.90 P
ATOM 23 OP1 C B1226 2.030 97.537 82.461 1.00 37.86 O
ATOM 24 OP2 C B1226 3.603 96.478 84.185 1.00 33.68 O
ATOM 25 O5' C B1226 4.099 98.720 83.219 1.00 34.44 O
TER
Atoms:
C2: (8.898,100.029,85.259)
OP1: (2.030,97.537,82.461)
OP2: (3.603,96.478,84.185)
C4: (8.738,97.836,86.034)
O5': (4.099,98.720,83.219)
C3': (6.196,100.348,81.973)
C1': (6.978,101.101,84.074)
O4': (5.562,101.029,84.130)
C5': (3.778,100.059,82.817)
P: (2.960,97.681,83.609)
O2: (9.534,101.081,85.098)
C4': (5.030,100.901,82.783)
C2': (7.365,101.094,82.586)
O2': (7.402,102.421,82.102)
N1: (7.553,99.962,84.836)
N3: (9.462,98.943,85.839)
N4: (9.355,96.776,86.548)
C6: (6.810,98.841,85.097)
C5: (7.355,97.768,85.691)
O3': (6.065,100.676,80.599)
OP1: (2.030,97.537,82.461)
OP2: (3.603,96.478,84.185)
C4: (8.738,97.836,86.034)
O5': (4.099,98.720,83.219)
C3': (6.196,100.348,81.973)
C1': (6.978,101.101,84.074)
O4': (5.562,101.029,84.130)
C5': (3.778,100.059,82.817)
P: (2.960,97.681,83.609)
O2: (9.534,101.081,85.098)
C4': (5.030,100.901,82.783)
C2': (7.365,101.094,82.586)
O2': (7.402,102.421,82.102)
N1: (7.553,99.962,84.836)
N3: (9.462,98.943,85.839)
N4: (9.355,96.776,86.548)
C6: (6.810,98.841,85.097)
C5: (7.355,97.768,85.691)
O3': (6.065,100.676,80.599)
C4: (6.902,98.026,89.317)
N3: (6.868,99.328,88.860)
OP1: (0.452,94.369,87.654)
OP2: (2.729,94.218,88.814)
C2: (5.781,100.020,88.388)
C1': (3.403,99.954,87.779)
C3': (2.678,98.530,86.059)
O5': (1.926,96.372,87.824)
O4': (2.246,99.262,88.231)
C5': (0.933,97.354,87.514)
P: (1.512,94.989,88.489)
C4': (1.584,98.643,87.101)
C2': (3.389,99.854,86.248)
O2': (2.601,100.895,85.698)
N1: (4.594,99.306,88.367)
O4: (7.996,97.460,89.449)
O2: (5.863,101.176,88.021)
C6: (4.548,98.014,88.859)
C5: (5.627,97.376,89.327)
O3': (2.131,98.423,84.762)
N3: (6.868,99.328,88.860)
OP1: (0.452,94.369,87.654)
OP2: (2.729,94.218,88.814)
C2: (5.781,100.020,88.388)
C1': (3.403,99.954,87.779)
C3': (2.678,98.530,86.059)
O5': (1.926,96.372,87.824)
O4': (2.246,99.262,88.231)
C5': (0.933,97.354,87.514)
P: (1.512,94.989,88.489)
C4': (1.584,98.643,87.101)
C2': (3.389,99.854,86.248)
O2': (2.601,100.895,85.698)
N1: (4.594,99.306,88.367)
O4: (7.996,97.460,89.449)
O2: (5.863,101.176,88.021)
C6: (4.548,98.014,88.859)
C5: (5.627,97.376,89.327)
O3': (2.131,98.423,84.762)
Image (generated by PyMOL):