Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01730:01728
Extra
PDB:
ATOM 1 O3' U A1729 121.741 144.574 96.709 1.00 50.04 O
ATOM 2 P C A1730 123.084 145.429 96.498 1.00 49.14 P
ATOM 3 OP1 C A1730 123.072 145.935 95.103 1.00 47.97 O
ATOM 4 OP2 C A1730 124.207 144.572 96.956 1.00 49.42 O
ATOM 5 O5' C A1730 122.927 146.664 97.495 1.00 47.31 O
ATOM 6 C5' C A1730 122.077 147.784 97.168 1.00 49.29 C
ATOM 7 C4' C A1730 122.336 148.934 98.117 1.00 51.36 C
ATOM 8 O4' C A1730 122.017 148.524 99.477 1.00 51.84 O
ATOM 9 C3' C A1730 123.777 149.422 98.170 1.00 52.89 C
ATOM 10 O3' C A1730 123.762 150.788 98.578 1.00 54.12 O
ATOM 11 C2' C A1730 124.349 148.574 99.303 1.00 53.22 C
ATOM 12 O2' C A1730 125.508 149.113 99.901 1.00 55.55 O
ATOM 13 C1' C A1730 123.177 148.598 100.280 1.00 51.86 C
ATOM 14 N1 C A1730 123.135 147.512 101.275 1.00 51.12 N
ATOM 15 C2 C A1730 123.202 147.847 102.639 1.00 50.55 C
ATOM 16 O2 C A1730 123.347 149.035 102.964 1.00 51.55 O
ATOM 17 N3 C A1730 123.109 146.868 103.566 1.00 49.29 N
ATOM 18 C4 C A1730 122.966 145.599 103.182 1.00 49.80 C
ATOM 19 N4 C A1730 122.854 144.669 104.136 1.00 49.07 N
ATOM 20 C5 C A1730 122.924 145.225 101.802 1.00 50.39 C
ATOM 21 C6 C A1730 123.013 146.204 100.891 1.00 50.69 C
ATOM 22 P G A1731 123.949 151.954 97.496 1.00 55.94 P
ATOM 23 OP1 G A1731 124.912 151.469 96.476 1.00 57.14 O
ATOM 24 OP2 G A1731 124.227 153.211 98.238 1.00 54.73 O
ATOM 25 O5' G A1731 122.526 152.083 96.785 1.00 55.77 O
TER
ATOM 1 O3' C B1727 118.458 140.849 108.123 1.00 48.80 O
ATOM 2 P U B1728 119.774 140.722 107.213 1.00 50.26 P
ATOM 3 OP1 U B1728 119.850 139.311 106.746 1.00 50.06 O
ATOM 4 OP2 U B1728 120.926 141.319 107.947 1.00 49.86 O
ATOM 5 O5' U B1728 119.469 141.652 105.960 1.00 47.15 O
ATOM 6 C5' U B1728 118.482 141.269 105.000 1.00 45.77 C
ATOM 7 C4' U B1728 118.460 142.245 103.861 1.00 43.95 C
ATOM 8 O4' U B1728 117.993 143.536 104.326 1.00 44.36 O
ATOM 9 C3' U B1728 119.806 142.544 103.235 1.00 42.50 C
ATOM 10 O3' U B1728 120.193 141.529 102.325 1.00 41.02 O
ATOM 11 C2' U B1728 119.546 143.879 102.558 1.00 44.14 C
ATOM 12 O2' U B1728 118.851 143.737 101.339 1.00 42.95 O
ATOM 13 C1' U B1728 118.639 144.563 103.587 1.00 46.15 C
ATOM 14 N1 U B1728 119.372 145.431 104.525 1.00 48.19 N
ATOM 15 C2 U B1728 119.663 146.730 104.121 1.00 48.16 C
ATOM 16 O2 U B1728 119.342 147.177 103.036 1.00 45.66 O
ATOM 17 N3 U B1728 120.347 147.485 105.042 1.00 49.67 N
ATOM 18 C4 U B1728 120.761 147.093 106.300 1.00 50.83 C
ATOM 19 O4 U B1728 121.307 147.912 107.038 1.00 51.39 O
ATOM 20 C5 U B1728 120.432 145.741 106.644 1.00 51.33 C
ATOM 21 C6 U B1728 119.766 144.976 105.769 1.00 50.38 C
ATOM 22 P U B1729 121.688 141.509 101.743 1.00 42.16 P
ATOM 23 OP1 U B1729 122.068 140.101 101.475 1.00 41.34 O
ATOM 24 OP2 U B1729 122.548 142.341 102.614 1.00 43.42 O
ATOM 25 O5' U B1729 121.558 142.256 100.346 1.00 42.67 O
TER
ATOM 2 P C A1730 123.084 145.429 96.498 1.00 49.14 P
ATOM 3 OP1 C A1730 123.072 145.935 95.103 1.00 47.97 O
ATOM 4 OP2 C A1730 124.207 144.572 96.956 1.00 49.42 O
ATOM 5 O5' C A1730 122.927 146.664 97.495 1.00 47.31 O
ATOM 6 C5' C A1730 122.077 147.784 97.168 1.00 49.29 C
ATOM 7 C4' C A1730 122.336 148.934 98.117 1.00 51.36 C
ATOM 8 O4' C A1730 122.017 148.524 99.477 1.00 51.84 O
ATOM 9 C3' C A1730 123.777 149.422 98.170 1.00 52.89 C
ATOM 10 O3' C A1730 123.762 150.788 98.578 1.00 54.12 O
ATOM 11 C2' C A1730 124.349 148.574 99.303 1.00 53.22 C
ATOM 12 O2' C A1730 125.508 149.113 99.901 1.00 55.55 O
ATOM 13 C1' C A1730 123.177 148.598 100.280 1.00 51.86 C
ATOM 14 N1 C A1730 123.135 147.512 101.275 1.00 51.12 N
ATOM 15 C2 C A1730 123.202 147.847 102.639 1.00 50.55 C
ATOM 16 O2 C A1730 123.347 149.035 102.964 1.00 51.55 O
ATOM 17 N3 C A1730 123.109 146.868 103.566 1.00 49.29 N
ATOM 18 C4 C A1730 122.966 145.599 103.182 1.00 49.80 C
ATOM 19 N4 C A1730 122.854 144.669 104.136 1.00 49.07 N
ATOM 20 C5 C A1730 122.924 145.225 101.802 1.00 50.39 C
ATOM 21 C6 C A1730 123.013 146.204 100.891 1.00 50.69 C
ATOM 22 P G A1731 123.949 151.954 97.496 1.00 55.94 P
ATOM 23 OP1 G A1731 124.912 151.469 96.476 1.00 57.14 O
ATOM 24 OP2 G A1731 124.227 153.211 98.238 1.00 54.73 O
ATOM 25 O5' G A1731 122.526 152.083 96.785 1.00 55.77 O
TER
ATOM 1 O3' C B1727 118.458 140.849 108.123 1.00 48.80 O
ATOM 2 P U B1728 119.774 140.722 107.213 1.00 50.26 P
ATOM 3 OP1 U B1728 119.850 139.311 106.746 1.00 50.06 O
ATOM 4 OP2 U B1728 120.926 141.319 107.947 1.00 49.86 O
ATOM 5 O5' U B1728 119.469 141.652 105.960 1.00 47.15 O
ATOM 6 C5' U B1728 118.482 141.269 105.000 1.00 45.77 C
ATOM 7 C4' U B1728 118.460 142.245 103.861 1.00 43.95 C
ATOM 8 O4' U B1728 117.993 143.536 104.326 1.00 44.36 O
ATOM 9 C3' U B1728 119.806 142.544 103.235 1.00 42.50 C
ATOM 10 O3' U B1728 120.193 141.529 102.325 1.00 41.02 O
ATOM 11 C2' U B1728 119.546 143.879 102.558 1.00 44.14 C
ATOM 12 O2' U B1728 118.851 143.737 101.339 1.00 42.95 O
ATOM 13 C1' U B1728 118.639 144.563 103.587 1.00 46.15 C
ATOM 14 N1 U B1728 119.372 145.431 104.525 1.00 48.19 N
ATOM 15 C2 U B1728 119.663 146.730 104.121 1.00 48.16 C
ATOM 16 O2 U B1728 119.342 147.177 103.036 1.00 45.66 O
ATOM 17 N3 U B1728 120.347 147.485 105.042 1.00 49.67 N
ATOM 18 C4 U B1728 120.761 147.093 106.300 1.00 50.83 C
ATOM 19 O4 U B1728 121.307 147.912 107.038 1.00 51.39 O
ATOM 20 C5 U B1728 120.432 145.741 106.644 1.00 51.33 C
ATOM 21 C6 U B1728 119.766 144.976 105.769 1.00 50.38 C
ATOM 22 P U B1729 121.688 141.509 101.743 1.00 42.16 P
ATOM 23 OP1 U B1729 122.068 140.101 101.475 1.00 41.34 O
ATOM 24 OP2 U B1729 122.548 142.341 102.614 1.00 43.42 O
ATOM 25 O5' U B1729 121.558 142.256 100.346 1.00 42.67 O
TER
Atoms:
C2: (123.202,147.847,102.639)
OP1: (123.072,145.935,95.103)
OP2: (124.207,144.572,96.956)
C4: (122.966,145.599,103.182)
O5': (122.927,146.664,97.495)
C3': (123.777,149.422,98.170)
C1': (123.177,148.598,100.280)
O4': (122.017,148.524,99.477)
C5': (122.077,147.784,97.168)
P: (123.084,145.429,96.498)
O2: (123.347,149.035,102.964)
C4': (122.336,148.934,98.117)
C2': (124.349,148.574,99.303)
O2': (125.508,149.113,99.901)
N1: (123.135,147.512,101.275)
N3: (123.109,146.868,103.566)
N4: (122.854,144.669,104.136)
C6: (123.013,146.204,100.891)
C5: (122.924,145.225,101.802)
O3': (123.762,150.788,98.578)
OP1: (123.072,145.935,95.103)
OP2: (124.207,144.572,96.956)
C4: (122.966,145.599,103.182)
O5': (122.927,146.664,97.495)
C3': (123.777,149.422,98.170)
C1': (123.177,148.598,100.280)
O4': (122.017,148.524,99.477)
C5': (122.077,147.784,97.168)
P: (123.084,145.429,96.498)
O2: (123.347,149.035,102.964)
C4': (122.336,148.934,98.117)
C2': (124.349,148.574,99.303)
O2': (125.508,149.113,99.901)
N1: (123.135,147.512,101.275)
N3: (123.109,146.868,103.566)
N4: (122.854,144.669,104.136)
C6: (123.013,146.204,100.891)
C5: (122.924,145.225,101.802)
O3': (123.762,150.788,98.578)
C4: (120.761,147.093,106.300)
N3: (120.347,147.485,105.042)
OP1: (119.850,139.311,106.746)
OP2: (120.926,141.319,107.947)
C2: (119.663,146.730,104.121)
C1': (118.639,144.563,103.587)
C3': (119.806,142.544,103.235)
O5': (119.469,141.652,105.960)
O4': (117.993,143.536,104.326)
C5': (118.482,141.269,105.000)
P: (119.774,140.722,107.213)
C4': (118.460,142.245,103.861)
C2': (119.546,143.879,102.558)
O2': (118.851,143.737,101.339)
N1: (119.372,145.431,104.525)
O4: (121.307,147.912,107.038)
O2: (119.342,147.177,103.036)
C6: (119.766,144.976,105.769)
C5: (120.432,145.741,106.644)
O3': (120.193,141.529,102.325)
N3: (120.347,147.485,105.042)
OP1: (119.850,139.311,106.746)
OP2: (120.926,141.319,107.947)
C2: (119.663,146.730,104.121)
C1': (118.639,144.563,103.587)
C3': (119.806,142.544,103.235)
O5': (119.469,141.652,105.960)
O4': (117.993,143.536,104.326)
C5': (118.482,141.269,105.000)
P: (119.774,140.722,107.213)
C4': (118.460,142.245,103.861)
C2': (119.546,143.879,102.558)
O2': (118.851,143.737,101.339)
N1: (119.372,145.431,104.525)
O4: (121.307,147.912,107.038)
O2: (119.342,147.177,103.036)
C6: (119.766,144.976,105.769)
C5: (120.432,145.741,106.644)
O3': (120.193,141.529,102.325)
Image (generated by PyMOL):