Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:314:313
Extra
PDB:
ATOM 1 O3' U A 13 17.200 -69.546 17.939 1.00 66.50 O
ATOM 2 P C A 14 15.931 -70.046 17.076 1.00 68.05 P
ATOM 3 OP1 C A 14 14.996 -70.712 18.015 1.00 67.93 O
ATOM 4 OP2 C A 14 16.459 -70.819 15.910 1.00 68.98 O
ATOM 5 O5' C A 14 15.300 -68.688 16.553 1.00 67.96 O
ATOM 6 C5' C A 14 14.265 -68.047 17.264 1.00 67.49 C
ATOM 7 C4' C A 14 13.731 -66.880 16.493 1.00 67.62 C
ATOM 8 O4' C A 14 14.813 -66.223 15.790 1.00 67.58 O
ATOM 9 C3' C A 14 12.744 -67.223 15.420 1.00 68.61 C
ATOM 10 O3' C A 14 11.452 -67.389 15.946 1.00 68.62 O
ATOM 11 C2' C A 14 12.882 -66.056 14.436 1.00 68.74 C
ATOM 12 O2' C A 14 12.158 -64.921 14.877 1.00 68.19 O
ATOM 13 C1' C A 14 14.370 -65.737 14.550 1.00 68.25 C
ATOM 14 N1 C A 14 15.172 -66.386 13.493 1.00 69.00 N
ATOM 15 C2 C A 14 15.096 -65.886 12.205 1.00 69.64 C
ATOM 16 O2 C A 14 14.344 -64.924 12.045 1.00 69.52 O
ATOM 17 N3 C A 14 15.837 -66.450 11.222 1.00 70.34 N
ATOM 18 C4 C A 14 16.634 -67.489 11.516 1.00 70.41 C
ATOM 19 N4 C A 14 17.361 -68.044 10.538 1.00 71.13 N
ATOM 20 C5 C A 14 16.734 -68.026 12.836 1.00 69.75 C
ATOM 21 C6 C A 14 15.995 -67.443 13.787 1.00 69.06 C
ATOM 22 P U A 15 10.491 -68.543 15.395 1.00 70.43 P
ATOM 23 OP1 U A 15 9.285 -68.533 16.266 1.00 70.16 O
ATOM 24 OP2 U A 15 11.301 -69.802 15.297 1.00 70.82 O
ATOM 25 O5' U A 15 10.118 -68.005 13.936 1.00 71.19 O
TER
ATOM 1 O3' A B 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 2 P U B 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 3 OP1 U B 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 4 OP2 U B 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 5 O5' U B 13 19.825 -70.845 16.674 1.00 67.30 O
ATOM 6 C5' U B 13 20.392 -70.040 17.696 1.00 66.24 C
ATOM 7 C4' U B 13 19.526 -68.837 18.019 1.00 65.73 C
ATOM 8 O4' U B 13 20.180 -67.610 17.597 1.00 65.40 O
ATOM 9 C3' U B 13 18.182 -68.763 17.327 1.00 66.38 C
ATOM 10 O3' U B 13 17.200 -69.546 17.939 1.00 66.50 O
ATOM 11 C2' U B 13 17.857 -67.298 17.406 1.00 65.83 C
ATOM 12 O2' U B 13 17.460 -66.981 18.712 1.00 64.99 O
ATOM 13 C1' U B 13 19.213 -66.687 17.134 1.00 65.51 C
ATOM 14 N1 U B 13 19.428 -66.517 15.702 1.00 66.30 N
ATOM 15 C2 U B 13 18.851 -65.479 15.013 1.00 66.45 C
ATOM 16 O2 U B 13 18.152 -64.691 15.597 1.00 65.92 O
ATOM 17 N3 U B 13 19.147 -65.450 13.660 1.00 67.23 N
ATOM 18 C4 U B 13 19.934 -66.334 12.951 1.00 67.88 C
ATOM 19 O4 U B 13 20.109 -66.178 11.749 1.00 68.57 O
ATOM 20 C5 U B 13 20.496 -67.384 13.734 1.00 67.68 C
ATOM 21 C6 U B 13 20.229 -67.440 15.049 1.00 66.92 C
ATOM 22 P C B 14 15.931 -70.046 17.076 1.00 68.05 P
ATOM 23 OP1 C B 14 14.996 -70.712 18.015 1.00 67.93 O
ATOM 24 OP2 C B 14 16.459 -70.819 15.910 1.00 68.98 O
ATOM 25 O5' C B 14 15.300 -68.688 16.553 1.00 67.96 O
TER
ATOM 2 P C A 14 15.931 -70.046 17.076 1.00 68.05 P
ATOM 3 OP1 C A 14 14.996 -70.712 18.015 1.00 67.93 O
ATOM 4 OP2 C A 14 16.459 -70.819 15.910 1.00 68.98 O
ATOM 5 O5' C A 14 15.300 -68.688 16.553 1.00 67.96 O
ATOM 6 C5' C A 14 14.265 -68.047 17.264 1.00 67.49 C
ATOM 7 C4' C A 14 13.731 -66.880 16.493 1.00 67.62 C
ATOM 8 O4' C A 14 14.813 -66.223 15.790 1.00 67.58 O
ATOM 9 C3' C A 14 12.744 -67.223 15.420 1.00 68.61 C
ATOM 10 O3' C A 14 11.452 -67.389 15.946 1.00 68.62 O
ATOM 11 C2' C A 14 12.882 -66.056 14.436 1.00 68.74 C
ATOM 12 O2' C A 14 12.158 -64.921 14.877 1.00 68.19 O
ATOM 13 C1' C A 14 14.370 -65.737 14.550 1.00 68.25 C
ATOM 14 N1 C A 14 15.172 -66.386 13.493 1.00 69.00 N
ATOM 15 C2 C A 14 15.096 -65.886 12.205 1.00 69.64 C
ATOM 16 O2 C A 14 14.344 -64.924 12.045 1.00 69.52 O
ATOM 17 N3 C A 14 15.837 -66.450 11.222 1.00 70.34 N
ATOM 18 C4 C A 14 16.634 -67.489 11.516 1.00 70.41 C
ATOM 19 N4 C A 14 17.361 -68.044 10.538 1.00 71.13 N
ATOM 20 C5 C A 14 16.734 -68.026 12.836 1.00 69.75 C
ATOM 21 C6 C A 14 15.995 -67.443 13.787 1.00 69.06 C
ATOM 22 P U A 15 10.491 -68.543 15.395 1.00 70.43 P
ATOM 23 OP1 U A 15 9.285 -68.533 16.266 1.00 70.16 O
ATOM 24 OP2 U A 15 11.301 -69.802 15.297 1.00 70.82 O
ATOM 25 O5' U A 15 10.118 -68.005 13.936 1.00 71.19 O
TER
ATOM 1 O3' A B 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 2 P U B 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 3 OP1 U B 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 4 OP2 U B 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 5 O5' U B 13 19.825 -70.845 16.674 1.00 67.30 O
ATOM 6 C5' U B 13 20.392 -70.040 17.696 1.00 66.24 C
ATOM 7 C4' U B 13 19.526 -68.837 18.019 1.00 65.73 C
ATOM 8 O4' U B 13 20.180 -67.610 17.597 1.00 65.40 O
ATOM 9 C3' U B 13 18.182 -68.763 17.327 1.00 66.38 C
ATOM 10 O3' U B 13 17.200 -69.546 17.939 1.00 66.50 O
ATOM 11 C2' U B 13 17.857 -67.298 17.406 1.00 65.83 C
ATOM 12 O2' U B 13 17.460 -66.981 18.712 1.00 64.99 O
ATOM 13 C1' U B 13 19.213 -66.687 17.134 1.00 65.51 C
ATOM 14 N1 U B 13 19.428 -66.517 15.702 1.00 66.30 N
ATOM 15 C2 U B 13 18.851 -65.479 15.013 1.00 66.45 C
ATOM 16 O2 U B 13 18.152 -64.691 15.597 1.00 65.92 O
ATOM 17 N3 U B 13 19.147 -65.450 13.660 1.00 67.23 N
ATOM 18 C4 U B 13 19.934 -66.334 12.951 1.00 67.88 C
ATOM 19 O4 U B 13 20.109 -66.178 11.749 1.00 68.57 O
ATOM 20 C5 U B 13 20.496 -67.384 13.734 1.00 67.68 C
ATOM 21 C6 U B 13 20.229 -67.440 15.049 1.00 66.92 C
ATOM 22 P C B 14 15.931 -70.046 17.076 1.00 68.05 P
ATOM 23 OP1 C B 14 14.996 -70.712 18.015 1.00 67.93 O
ATOM 24 OP2 C B 14 16.459 -70.819 15.910 1.00 68.98 O
ATOM 25 O5' C B 14 15.300 -68.688 16.553 1.00 67.96 O
TER
Atoms:
C2: (15.096,-65.886,12.205)
OP1: (14.996,-70.712,18.015)
OP2: (16.459,-70.819,15.910)
C4: (16.634,-67.489,11.516)
O5': (15.300,-68.688,16.553)
C3': (12.744,-67.223,15.420)
C1': (14.370,-65.737,14.550)
O4': (14.813,-66.223,15.790)
C5': (14.265,-68.047,17.264)
P: (15.931,-70.046,17.076)
O2: (14.344,-64.924,12.045)
C4': (13.731,-66.880,16.493)
C2': (12.882,-66.056,14.436)
O2': (12.158,-64.921,14.877)
N1: (15.172,-66.386,13.493)
N3: (15.837,-66.450,11.222)
N4: (17.361,-68.044,10.538)
C6: (15.995,-67.443,13.787)
C5: (16.734,-68.026,12.836)
O3': (11.452,-67.389,15.946)
OP1: (14.996,-70.712,18.015)
OP2: (16.459,-70.819,15.910)
C4: (16.634,-67.489,11.516)
O5': (15.300,-68.688,16.553)
C3': (12.744,-67.223,15.420)
C1': (14.370,-65.737,14.550)
O4': (14.813,-66.223,15.790)
C5': (14.265,-68.047,17.264)
P: (15.931,-70.046,17.076)
O2: (14.344,-64.924,12.045)
C4': (13.731,-66.880,16.493)
C2': (12.882,-66.056,14.436)
O2': (12.158,-64.921,14.877)
N1: (15.172,-66.386,13.493)
N3: (15.837,-66.450,11.222)
N4: (17.361,-68.044,10.538)
C6: (15.995,-67.443,13.787)
C5: (16.734,-68.026,12.836)
O3': (11.452,-67.389,15.946)
C4: (19.934,-66.334,12.951)
N3: (19.147,-65.450,13.660)
OP1: (20.411,-73.269,16.275)
OP2: (20.511,-71.579,14.355)
C2: (18.851,-65.479,15.013)
C1': (19.213,-66.687,17.134)
C3': (18.182,-68.763,17.327)
O5': (19.825,-70.845,16.674)
O4': (20.180,-67.610,17.597)
C5': (20.392,-70.040,17.696)
P: (20.679,-71.901,15.800)
C4': (19.526,-68.837,18.019)
C2': (17.857,-67.298,17.406)
O2': (17.460,-66.981,18.712)
N1: (19.428,-66.517,15.702)
O4: (20.109,-66.178,11.749)
O2: (18.152,-64.691,15.597)
C6: (20.229,-67.440,15.049)
C5: (20.496,-67.384,13.734)
O3': (17.200,-69.546,17.939)
N3: (19.147,-65.450,13.660)
OP1: (20.411,-73.269,16.275)
OP2: (20.511,-71.579,14.355)
C2: (18.851,-65.479,15.013)
C1': (19.213,-66.687,17.134)
C3': (18.182,-68.763,17.327)
O5': (19.825,-70.845,16.674)
O4': (20.180,-67.610,17.597)
C5': (20.392,-70.040,17.696)
P: (20.679,-71.901,15.800)
C4': (19.526,-68.837,18.019)
C2': (17.857,-67.298,17.406)
O2': (17.460,-66.981,18.712)
N1: (19.428,-66.517,15.702)
O4: (20.109,-66.178,11.749)
O2: (18.152,-64.691,15.597)
C6: (20.229,-67.440,15.049)
C5: (20.496,-67.384,13.734)
O3': (17.200,-69.546,17.939)
Image (generated by PyMOL):