ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PWT:B4:B3

Extra

PDB:
ATOM 1 O3' U A 3 -2.186 27.499 6.292 1.00 45.61 O
ATOM 2 P C A 4 -0.833 26.937 6.926 1.00 46.25 P
ATOM 3 OP1 C A 4 -0.261 25.896 6.034 1.00 46.37 O
ATOM 4 OP2 C A 4 -1.076 26.623 8.355 1.00 45.52 O
ATOM 5 O5' C A 4 0.090 28.218 6.833 1.00 46.84 O
ATOM 6 C5' C A 4 1.120 28.407 7.749 1.00 44.11 C
ATOM 7 C4' C A 4 1.679 29.790 7.628 1.00 41.98 C
ATOM 8 O4' C A 4 0.683 30.789 7.985 1.00 41.01 O
ATOM 9 C3' C A 4 2.769 29.933 8.655 1.00 41.90 C
ATOM 10 O3' C A 4 3.964 29.437 8.090 1.00 42.89 O
ATOM 11 C2' C A 4 2.718 31.403 9.015 1.00 39.54 C
ATOM 12 O2' C A 4 3.374 32.233 8.091 1.00 40.06 O
ATOM 13 C1' C A 4 1.207 31.645 8.986 1.00 38.64 C
ATOM 14 N1 C A 4 0.549 31.286 10.253 1.00 35.43 N
ATOM 15 C2 C A 4 0.903 31.968 11.422 1.00 33.63 C
ATOM 16 O2 C A 4 1.761 32.864 11.359 1.00 34.50 O
ATOM 17 N3 C A 4 0.304 31.633 12.590 1.00 34.40 N
ATOM 18 C4 C A 4 -0.612 30.658 12.616 1.00 34.18 C
ATOM 19 N4 C A 4 -1.173 30.352 13.789 1.00 33.72 N
ATOM 20 C5 C A 4 -0.994 29.950 11.439 1.00 35.13 C
ATOM 21 C6 C A 4 -0.394 30.295 10.290 1.00 34.55 C
ATOM 22 P A A 5 4.741 28.263 8.839 1.00 43.77 P
ATOM 23 OP1 A A 5 5.838 27.787 7.953 1.00 45.26 O
ATOM 24 OP2 A A 5 3.746 27.297 9.357 1.00 42.56 O
ATOM 25 O5' A A 5 5.381 29.049 10.058 1.00 43.17 O
TER

ATOM 1 O3' G B 2 -8.695 27.007 7.757 1.00 42.40 O
ATOM 2 P U B 3 -7.261 26.387 8.144 1.00 42.36 P
ATOM 3 OP1 U B 3 -7.209 24.979 7.683 1.00 43.84 O
ATOM 4 OP2 U B 3 -6.966 26.703 9.567 1.00 41.00 O
ATOM 5 O5' U B 3 -6.275 27.234 7.236 1.00 42.52 O
ATOM 6 C5' U B 3 -4.965 27.524 7.671 1.00 42.47 C
ATOM 7 C4' U B 3 -4.316 28.485 6.718 1.00 43.53 C
ATOM 8 O4' U B 3 -4.791 29.841 6.955 1.00 41.92 O
ATOM 9 C3' U B 3 -2.825 28.601 6.910 1.00 43.12 C
ATOM 10 O3' U B 3 -2.186 27.499 6.292 1.00 45.61 O
ATOM 11 C2' U B 3 -2.527 29.941 6.256 1.00 44.47 C
ATOM 12 O2' U B 3 -2.507 29.874 4.843 1.00 44.84 O
ATOM 13 C1' U B 3 -3.731 30.761 6.725 1.00 42.59 C
ATOM 14 N1 U B 3 -3.439 31.454 7.988 1.00 42.24 N
ATOM 15 C2 U B 3 -2.550 32.515 7.948 1.00 41.51 C
ATOM 16 O2 U B 3 -2.040 32.919 6.912 1.00 43.37 O
ATOM 17 N3 U B 3 -2.281 33.089 9.167 1.00 42.90 N
ATOM 18 C4 U B 3 -2.808 32.724 10.392 1.00 40.67 C
ATOM 19 O4 U B 3 -2.424 33.303 11.412 1.00 41.82 O
ATOM 20 C5 U B 3 -3.738 31.636 10.342 1.00 39.57 C
ATOM 21 C6 U B 3 -4.015 31.053 9.175 1.00 39.38 C
ATOM 22 P C B 4 -0.833 26.937 6.926 1.00 46.25 P
ATOM 23 OP1 C B 4 -0.261 25.896 6.034 1.00 46.37 O
ATOM 24 OP2 C B 4 -1.076 26.623 8.355 1.00 45.52 O
ATOM 25 O5' C B 4 0.090 28.218 6.833 1.00 46.84 O
TER

Atoms:
C2: (0.903,31.968,11.422)
OP1: (-0.261,25.896,6.034)
OP2: (-1.076,26.623,8.355)
C4: (-0.612,30.658,12.616)
O5': (0.090,28.218,6.833)
C3': (2.769,29.933,8.655)
C1': (1.207,31.645,8.986)
O4': (0.683,30.789,7.985)
C5': (1.120,28.407,7.749)
P: (-0.833,26.937,6.926)
O2: (1.761,32.864,11.359)
C4': (1.679,29.790,7.628)
C2': (2.718,31.403,9.015)
O2': (3.374,32.233,8.091)
N1: (0.549,31.286,10.253)
N3: (0.304,31.633,12.590)
N4: (-1.173,30.352,13.789)
C6: (-0.394,30.295,10.290)
C5: (-0.994,29.950,11.439)
O3': (3.964,29.437,8.090)
C4: (-2.808,32.724,10.392)
N3: (-2.281,33.089,9.167)
OP1: (-7.209,24.979,7.683)
OP2: (-6.966,26.703,9.567)
C2: (-2.550,32.515,7.948)
C1': (-3.731,30.761,6.725)
C3': (-2.825,28.601,6.910)
O5': (-6.275,27.234,7.236)
O4': (-4.791,29.841,6.955)
C5': (-4.965,27.524,7.671)
P: (-7.261,26.387,8.144)
C4': (-4.316,28.485,6.718)
C2': (-2.527,29.941,6.256)
O2': (-2.507,29.874,4.843)
N1: (-3.439,31.454,7.988)
O4: (-2.424,33.303,11.412)
O2: (-2.040,32.919,6.912)
C6: (-4.015,31.053,9.175)
C5: (-3.738,31.636,10.342)
O3': (-2.186,27.499,6.292)
Image (generated by PyMOL):
PyMOL image
show in jmol